Os03g0818100

From RiceWiki
Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0818100| Description = Histidine acid phosphatase family protein| Version = NM_001058240.1 GI:115456208 GeneID:4334577| Length = 5369 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0818100

Description

Histidine acid phosphatase family protein

Version

NM_001058240.1 GI:115456208 GeneID:4334577

Length

5369 bp

Definition

Oryza sativa Japonica Group Os03g0818100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35185489..35190857

Sequence Coding Region

35185568..35185707,35185875..35185959,35186276..35186575,35187341..35187499,35187999..35188139
,35188225..35188281,35188681..35188819,35189101..35189205,35189306..35189523
,35190127..35190168,35190283..35190456

Expression

GEO Profiles:Os03g0818100

Genome Context

<gbrowseImage1> name=NC_008396:35185489..35190857 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35185489..35190857 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctccccgcacgcctctccccctcgtcctcctcctcgtctccgccgcgctcctcgcggcggctcccctctcgccggcggccgagaccggtgccgccgcgttcgacgtccgccgccacctctccaccgtcaccaggtacgatgtggcgaggggatccaatagtgtgtcctccgcgccgtctatgtcggatgagtgccgcgtgatccacctcaatctcgtggcaagacatgggactcgcgcacctaccaaaaagagaatcaaagagctggatagactggcggttcggttgaaggctcttatcgatgaagcaaaacaagggcctgaaagtgactccctgaaaaaaattccttcatggatgaaagggtgggagtcaccctggaaaggtagggtgaaaggtggtgagctggtcagtgaaggggaggaagagctatacaaccttgctatcagagtcaaggagaggtttcaaggcctatttgatgaggaatatcaccctgatgtgtattcaataagagcaactcaggttcctcgggcatcagctagtgcagtagcatttggtttgggtctactttctgggaaagggaagcttggacctgtgaaaaaccgtgccttttctgttctgagtgagagtcgtgcaagtgatatttgtctgcgattctttgatagctgtgaaacatacaaggactacaggaaaagaaaggagcctgatgttgaaaagcaaaaggaaccaattttagaacacgtcacatcggcattagttaaccgttatcatctcaattttacaccaaaagatgtttcttccctctggttcctttgcaagcaggaagcatctttaatgaatataaccaatcaagcttgtcaactttttaatgaagctgaggtttattttctagagtggacagatgatctggagggctttgtgctaaaaggttatggtgagtcaataaactatcggatgggactgccattgctcaaggacgttgtccagtcaatggaagaagcaatcgttgctaaagaagaaaaccaccctgatggtacatatgagaaggcaaggctccgatttgcacatgctgaaactgttgtccctttctcatgtcttcttggtctttttcttgaaggatcagattttgcgaagatacaacgggaggaatcattggacatacctcctgtgccaccacagggaagaaattggaagggcagtgttgttgcaccttttgctggtaacaatatgttggctttgtaccagtgcccaggaaaaactgatggtggtaagatttctcgggatcagaagagctcatacttcgtgcaggttatacacaatgaagctccagtttcaatgccgggatgcgggaacaaagatttctgcccatttgaagagttcaaggagaagatagttgaaccccacctgaagcatgactacgacgccctatgcaagataaggccggtggcaagagaggagccttcctccttcagttccaggatgtccaatttcttcctaggtttgttctcgcagaaaggataccgtgttagtgctcaggatgtgaagtcggagctgtag</cdnaseq>

Protein Sequence

<aaseq>MAAPRTPLPLVLLLVSAALLAAAPLSPAAETGAAAFDVRRHLST VTRYDVARGSNSVSSAPSMSDECRVIHLNLVARHGTRAPTKKRIKELDRLAVRLKALI DEAKQGPESDSLKKIPSWMKGWESPWKGRVKGGELVSEGEEELYNLAIRVKERFQGLF DEEYHPDVYSIRATQVPRASASAVAFGLGLLSGKGKLGPVKNRAFSVLSESRASDICL RFFDSCETYKDYRKRKEPDVEKQKEPILEHVTSALVNRYHLNFTPKDVSSLWFLCKQE ASLMNITNQACQLFNEAEVYFLEWTDDLEGFVLKGYGESINYRMGLPLLKDVVQSMEE AIVAKEENHPDGTYEKARLRFAHAETVVPFSCLLGLFLEGSDFAKIQREESLDIPPVP PQGRNWKGSVVAPFAGNNMLALYQCPGKTDGGKISRDQKSSYFVQVIHNEAPVSMPGC GNKDFCPFEEFKEKIVEPHLKHDYDALCKIRPVAREEPSSFSSRMSNFFLGLFSQKGY RVSAQDVKSEL</aaseq>

Gene Sequence

<dnaseqindica>80..219#387..471#788..1087#1853..2011#2511..2651#2737..2793#3193..3331#3613..3717#3818..4035#4639..4680#4795..4968#acccacacaagtaaagctcccaaaatcaaattaaattaaagagaaaaaaaagaagaagagaagggcaaatcgattcgccatggctgctccccgcacgcctctccccctcgtcctcctcctcgtctccgccgcgctcctcgcggcggctcccctctcgccggcggccgagaccggtgccgccgcgttcgacgtccgccgccacctctccaccgtcaccaggtacgcagctgcttcgatcgctgatctgagcatttgtcatgtggtggtggtgggatttttgttagttttggatgatacggtgtttgcatccttttactcagtctgggaccgtggagctagggtttggcggggatggaaaagggtttaatccctttgtgatttttcaggtacgatgtggcgaggggatccaatagtgtgtcctccgcgccgtctatgtcggatgagtgccgcgtgatccacctcaatctcgtggtaattaccattcctgcatttttcattttgctttcgccacacagttttagtaaattcacccatgttagttcagtgttgtgtgaaggagatagagattgcagtaatagccatcatgaacggttctaagggcttaacttagtttgccagaatttctctgaacgattagcagtccaaaaactaatttaaatagaacaatgtgcactgctgtatatgtttagtcttttcactgttggttacatttcctctccaaaatgctgaaatgtacttcagccatgataaaaaaatggcagttgatttggtgatttttgttctccaggcaagacatgggactcgcgcacctaccaaaaagagaatcaaagagctggatagactggcggttcggttgaaggctcttatcgatgaagcaaaacaagggcctgaaagtgactccctgaaaaaaattccttcatggatgaaagggtgggagtcaccctggaaaggtagggtgaaaggtggtgagctggtcagtgaaggggaggaagagctatacaaccttgctatcagagtcaaggagaggtttcaaggcctatttgatgaggaatatcaccctgatgtgtattcaataagagcaactcaggtcagctcaatgaggtttattgcatttgcttaataaattattatttttcaaaatactaaggaatcatgggttcatggctttacaatcttatcatctgacaaaataccacgaaatatggagccttagtataagcccagtttactgtgagtcagatgtggctggaacatagtaacttttaatcccagctttgctatgcgattaatcatagttaaacaattttgtttacttttacatctactcgcgctacactttcttttgacaactcctctgctctctgccgccattatctgctttagaacttggaacaagaaagctggaaaccagtaaaactaaaagcctctcctgcagctattttgtcttctttattgtgtacactgaactatcttatttaaattaattttaatcataacttgtggggcctcttcttgtataatgccttaaattgatgctataccccagttttcagaagctcccaacttcacatgcgatggctttgggctataatacacacattttttgcacacttgagccaaaatgcctacattagagggctattttggcttgctgttttttatttattttagaaagtaaacataatatggttgatcttcataagagtgaatcctactgcctgaaatgcacatatagtttcaacatgtagcacaattctctgttgactttgtttaatgatcttaagctgataaatgctgttaaaactacttcagtgcagtacggttaactattgctctctgtttgagaatgcaggttcctcgggcatcagctagtgcagtagcatttggtttgggtctactttctgggaaagggaagcttggacctgtgaaaaaccgtgccttttctgttctgagtgagagtcgtgcaagtgatatttgtctgcgattctttgatagctgtgaaacatacaaggtactattgatgaactatggtaacaatgagataaaataataaacatatttggagaagaataatgtgatcttgtatctcgacatatttgttcccttctctttggatgcagacattttatatttataagacatgcaaatgttggatggatatcttaattaccaattttgaacagatttgttcagctaatcaaacatactgctacatgcacttgtgtgatcactctgtactctatactctgtactctgtactctgtacatgcatttgacgggtttttcatgtactgttttatgcatggtgcattcatacttctgcttatgtctgttggctattctctctggacttcttgttttgccatgtgattatcaatctctattcagtcagtgatagtaaaatgttctttttagttcgatatgctgtataagataactttcctctgttcatacaactgctattgaattgttactttgacaaaggattgtaactacaatactattttcaggactacaggaaaagaaaggagcctgatgttgaaaagcaaaaggaaccaattttagaacacgtcacatcggcattagttaaccgttatcatctcaattttacaccaaaagatgtttcttccctctggttcctttgcaagcaggtaacaacttgcctgaggacactagtgttcgattcagtaatacctatggatattcaataagttgaattaatggttcattttgcaggaagcatctttaatgaatataaccaatcaagcttgtcaactttttaatgaagctgaggtaggttgcttttggatttcagtttttctcaattataccactattgatgactatacttaactagcttgtgtccagtaatatgaaaatgttatgagcctgacatgctatgcctccttagcagttatcagttcagtgataagattactcagacagacctatttctcaactgcactatgtactttctgttatctggttgttgtagaacagtagtatttacactggataacatctggaaactatatacactgcacatgaatgcttctagagcattaatcatcataatactttttagctcgtaggtagctcgtaggttctttttggataattgtgtgcaagttaccaaaacattagtgtgcctcgactgattttgattaatgactaacacatttgtttggtcaggtttattttctagagtggacagatgatctggagggctttgtgctaaaaggttatggtgagtcaataaactatcggatgggactgccattgctcaaggacgttgtccagtcaatggaagaagcaatcgttgctaaagaaggtagtggttcctcccaagtttaagtttatcaaataagttcgttgatactaccgcctctgccttcctacattctatgcctttgtcttcaactgatattgaaattcttgtcgtatcagatgattatttgcatgacggtttccttagcgtgtgctaaatgtttagttagagcttgcaaatttgcaatgccaaattgtaaacagtacttgagatatacagccttattacaggtaacattgaggtgtaaaatctaaaatcgacattttcaattcttgaaattgtagaaaaccaccctgatggtacatatgagaaggcaaggctccgatttgcacatgctgaaactgttgtccctttctcatgtcttcttggtctttttcttgaaggatcaggtatctttcgttattgagaaaattccattcacacataatcattctccatgaataatgtagcatgtaactaattgcccatttccttgtctttcatatgtagattttgcgaagatacaacgggaggaatcattggacatacctcctgtgccaccacagggaagaaattggaagggcagtgttgttgcaccttttgctggtaacaatatgttggctttgtaccagtgcccaggaaaaactgatggtggtaagatttctcgggatcagaagagctcatacttcgtgcaggttatacacaatgaagctccagtttcaatgccggtaagattatagcttctaatttgtggtttatttttatgtgttcttcccaatttctggggactggtcacttggacaacatcctgcattattacaccccttttatgcccaaaatcgttggatttgtttgatgatataagattacaagttctgtagttcatgttatgcccaaaatgctcttgtgagccctttgcttgagcttgaaccctcataattttgggctttgatactttcttagttcatgccgtggtaacagaataaatggctcaaggagaattcacgtctaatatcttttggcatcggacaggctttattaactttaaggacttaatccaacaattgttcctttccattttttaatgtagtaatttatataacaacaaaaacaaactgacattatcgcatagtaagtgccattaacaaacactttcaaaaagttgtgtataggttttacatataacttgtttttgcctggccggccaaagagtaggtcggccaaatttcattaagaaagagtatttataagcatgccggcatagtcatctgagtttttttgtaagctaatttatgaagaacctcctaatcaggcttttttttttcctccagggatgcgggaacaaagatttctgcccatttgaagagttcaaggtaaataaaattgcctggtgctaatgttcaggcatcgtattcaagaaacaaacatgaatccccttagcagttacctgctgagcatctctcgttaatgccagtctacatttacaggagaagatagttgaaccccacctgaagcatgactacgacgccctatgcaagataaggccggtggcaagagaggagccttcctccttcagttccaggatgtccaatttcttcctaggtttgttctcgcagaaaggataccgtgttagtgctcaggatgtgaagtcggagctgtaggtttatactaggcagatggtgcatcttctacctttcgcactaagctgctactatccatctaccatggataaccaagggactgactcgtggactaaactacggtgtttctgtacttgcaaccctcagtttgatgagcgagtccaatgtgtaacaacacgctatcactggtgcccctcttctttcagatagaagacgtttgttgatcaatgtaatctttgttttaatctggactttctctagtgctcaactgctgactctgttgagatcaaactgaaagtactagcacacggttgtgattgtggcccttgtggtaggttgagatcatgtactactacttggacaatccgtttcaagctttcagctcaatcaatccagatttgggagatccccaattcgagatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0818100, RefSeq:Os03g0818100