Os03g0818200

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0818200| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001058241.1 GI:115456210 GeneID:4334578| Length = 2...")
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Gene Name

Os03g0818200

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001058241.1 GI:115456210 GeneID:4334578

Length

2925 bp

Definition

Oryza sativa Japonica Group Os03g0818200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35191020..35193944

Sequence Coding Region

35191077..35191212,35191296..35191480,35191591..35191779,35192456..35192618,35193193..35193379
,35193614..35193758

Expression

GEO Profiles:Os03g0818200

Genome Context

<gbrowseImage1> name=NC_008396:35191020..35193944 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35191020..35193944 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcggcggcggaggaggggagggggagacggtgctggtcaccggcgcgagcggcttcatcggctcgtgtctcgttcgccgcctcctcgcccgcggctactccgtccacgccgccgtcctcaaccccgatgacaaggccgagacggaccacctccacgcgctcgccgccgccggcggcggcgagggccgccgcctccgcgtgttcccgggcgacctcctcgacggcgccgccctcctcgccgccgcgcggggctgctccggcgtcttccacctcgcctccccctgcatcgtggaccgcgtcctcgacccccaggcgcagctgatggtgccggcggtggaggggacgctgaacgtgctgcgcgcggccaaggacgccggcggagtgcggcgggtggtggtgacctcgtccatctccgccatcgtgcccagccccggctggccggccggcgaggtgcgcgacgagcgctgctggactgaccttgactactgcgagaagaacggggtttggtaccctgcttcaaaaacattggcagagaaggcagcatggaagtttgcagaggagaatggattggatgtggttgtggttaacccaggaactgtcatgggcctggtaatcccaccgacgatcaatgctagcatggccatgcttgttcgcctactcgaaggttgcacagaggagtatgcggatttttacatggggccagtccatgtggaagacgttgctcttgcccatattctgctgtacgagaacccatctgcatccgggaggcacctctgcgtgcagtccattgctcactggagcgatttcgcttccaaagtcgccgagctctaccccgagtacaaagtgccaaaattacccaaggaaacgcagcctgggctggtgagagcagaggctgcgtcgaagaagctgatcgcgctgggtttgcagttcagtcccatggagaagatcatcagggattcagtggaaagcctcaagagcagaggcttcatctcttga</cdnaseq>

Protein Sequence

<aaseq>MASGGGGGGEGETVLVTGASGFIGSCLVRRLLARGYSVHAAVLN PDDKAETDHLHALAAAGGGEGRRLRVFPGDLLDGAALLAAARGCSGVFHLASPCIVDR VLDPQAQLMVPAVEGTLNVLRAAKDAGGVRRVVVTSSISAIVPSPGWPAGEVRDERCW TDLDYCEKNGVWYPASKTLAEKAAWKFAEENGLDVVVVNPGTVMGLVIPPTINASMAM LVRLLEGCTEEYADFYMGPVHVEDVALAHILLYENPSASGRHLCVQSIAHWSDFASKV AELYPEYKVPKLPKETQPGLVRAEAASKKLIALGLQFSPMEKIIRDSVESLKSRGFIS </aaseq>

Gene Sequence

<dnaseqindica>58..193#277..461#572..760#1437..1599#2174..2360#2595..2739#aggctcacaagccacagctctctcacacgagagctcgagtctctctcgtcggcgacaatggcgagcggcggcggcggaggaggggagggggagacggtgctggtcaccggcgcgagcggcttcatcggctcgtgtctcgttcgccgcctcctcgcccgcggctactccgtccacgccgccgtcctcaaccccggtcagtgcgaaaccgccattactgctgcttgtttgcttgcaaggcggaggaggtgatgaagacaatggtgttgtgctgtgcagatgacaaggccgagacggaccacctccacgcgctcgccgccgccggcggcggcgagggccgccgcctccgcgtgttcccgggcgacctcctcgacggcgccgccctcctcgccgccgcgcggggctgctccggcgtcttccacctcgcctccccctgcatcgtggaccgcgtcctcgacccccaggtacaccggccggcgactcttctcctctcgacgtccgtaccggcctcgtcggcgtcggcgtcggcgggctccaggctcaccgcctccggccgtgttcccgttgtttgcaggcgcagctgatggtgccggcggtggaggggacgctgaacgtgctgcgcgcggccaaggacgccggcggagtgcggcgggtggtggtgacctcgtccatctccgccatcgtgcccagccccggctggccggccggcgaggtgcgcgacgagcgctgctggactgaccttgactactgcgagaagaacggggtgagcagtcttgtgtcttggcatctccatttttcttccattctcattggaattatttgacagtgtgcgaagtgcaaattgatgatgatattataacgagtaaatttcacaaaactgcaactgtttggttaaaactatcattttgctgggactttagcaacgtgtttcacaaaactgcaataatagcaaacatttttagcataatgctacaactttatcccctcgtgtgtgtatggcatgcgggtctaaaattgtcgagcaaataaagttatagttctatgataaaatcggacactattgttgcagttctctgaaatgcttagctaaaattaaaattgtagcaaattgatacttttgacaaaatagttgtagttttctgaaatttactctattattattatcagtttagaggggggaaataagtttctagcaagacaagaaaaggctgcactctccatgcatgccagtgctgtttggtgagatgaaaatgatatcaataatttcttttacatgttgctttctgcatttgattctcctagacccaatgggaacaaaattcagtcaatgataacatggaaaaggactgcagaatttacatcatgcagcccacacatcgctgcaattatatgaaccttttcgctggtatctgaggcacgctttggttggttgtgcataggtttggtaccctgcttcaaaaacattggcagagaaggcagcatggaagtttgcagaggagaatggattggatgtggttgtggttaacccaggaactgtcatgggcctggtaatcccaccgacgatcaatgctagcatggccatgcttgttcgcctactcgaaggtatgcattttggatcaatcatgtagctgatcttaaccatagttaagtctgaatagtactattctaggacaagtgatattgtttccaatcaatgtgattaatgtgtggaagagggaaactgattcatgtgcttgcacaaactaggaacttataaccctcagaaagtatcaagtatgttaagattgattgctctaggtaaattaccacaaatacttgttccaaaaaaaaaattaccacaaatactgagaatactaggaagctgatagtgctgcactgaatatgtcacagtgattagtatcaccagagagtgaaaccgcatgttttgctatccctcaacacttgatgtaatgacatgaaaaataggcttcttcagttcagttggcataaaagagaaccgttgattcctaaatgaccatgcatgtgctactcaaaaacttctcttgtttgattcagtgtgagggatagaatggcaattttgtgtgcctagaaattcttgattgaatggttgcctcttccagctgtgattgctactgcaaggaaacacctaaacatgctcaccattgtgacaatgcaggttgcacagaggagtatgcggatttttacatggggccagtccatgtggaagacgttgctcttgcccatattctgctgtacgagaacccatctgcatccgggaggcacctctgcgtgcagtccattgctcactggagcgatttcgcttccaaagtcgccgagctctaccccgagtacaaagtgccaaagtgagtttagtggactgtagggcctgtttggttcgcagccaaaggttgccacgccaaaccttagacgtaccttcttaatacattcggatggcctccttcggccttcccggcaaaaaccttagacgtaccacataaatctccaaatgcttccatgactatatcaaactgtgaatgatgcagctgcaattgcaaatatcactaactgataaattatttttggtttttgtgtggcagattacccaaggaaacgcagcctgggctggtgagagcagaggctgcgtcgaagaagctgatcgcgctgggtttgcagttcagtcccatggagaagatcatcagggattcagtggaaagcctcaagagcagaggcttcatctcttgatccttctatgcattaatccttctgcctgagtagattactcgtgtgttaatgtgttattatgccattttcagcaagcactctgtgtttatgaataatggaaatgtgcagagacgctatgattgggaatgctccagttgttgagcacttgacaaatatatcatgcaatgcatgcagctacaattcaac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0818200, RefSeq:Os03g0818200