Os09g0266600

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0266600| Description = NPH3 domain containing protein| Version = NM_001069255.1 GI:115478249 GeneID:4346563| Length = 2470 bp| Definition ...")
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Gene Name

Os09g0266600

Description

NPH3 domain containing protein

Version

NM_001069255.1 GI:115478249 GeneID:4346563

Length

2470 bp

Definition

Oryza sativa Japonica Group Os09g0266600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5587461..5589930

Sequence Coding Region

5587790..5588218,5588302..5589051,5589859..5589930

Expression

GEO Profiles:Os09g0266600

Genome Context

<gbrowseImage1> name=NC_008402:5587461..5589930 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5587461..5589930 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggtccgagagccgcatcgtccagccctgcgtcgacgccatcgtcgagaagatcctcacgcccccctccaaggttacgtggtcgtacacctacacgaggcctgggtacgcaaagaaggcccaccagtcagtgcccaaggactggtggacggaggacgtgtcggagctggacatcgacgtcttccgctccctcctctccaccgtctgcgccgcccgcctcctcccgccgccgctcatcggcgaggccctccacgtctacgcctgcaagcacctgcctgacccgctcaaccacgccgccgccgccgccaccgccaacggccagagctctgagctggagacggcggcggcgaagcagcgtcgcgtgctggagaccatcgtcaccatgatccccggcgacgccggcgcggtcaccggccgcttcctgctccggctgctccgcgtggcgagctacgtcggcgcgtcgccgtcgacgcgcgcgcagctggtccggcaggccggggcgcagctcgacgaggcgagggcggtggacctgctcgtcccgatgccgtcgtcgtcggacccgccggcgtacgacgtcggcgccgcggaggccgtgctcgagcacttcctggcgctgttccagcggccggcgccgcccgacgagcggcggcggatgagcgccgccatggagaaggtggccaggacgttcgacgagtacctccgcgccgtcgcgctccacgccgacttccccgtcggcaagttcgtcgacctcgccgagtgcttgccggacatcgcccgcaacgaccacgacggcctctaccacgccattgacacctatctcaaggagcacccggagctgagcaaggcggacaagaagcggctatgccggatgatcgactgccggaagctgtcgccggacgtgcgggcgcaggcgatctccaacgaccggatgccgctgcgcaccatcgtgcagctgctcttcgtcgagcaggagagggccatgggcggcggcggcgcaagcggcagcaacagcgccgtcgcgcccgacgccatcgcaatgctcgccgcaagaaaggagaaggaggacgagccgccggcgccggccgctgaccacaagtcggacgtgcaccggccacgcggcgaccacggcgaacgcgcccgggcggacggcgcggcgatgacgaggtcgctctcggcgtccaccaccaagacggccggcgctgccgcgccgaggacggcggagagtagggggagcaggatgaggaacaagtaa</cdnaseq>

Protein Sequence

<aaseq>WSESRIVQPCVDAIVEKILTPPSKVTWSYTYTRPGYAKKAHQSV PKDWWTEDVSELDIDVFRSLLSTVCAARLLPPPLIGEALHVYACKHLPDPLNHAAAAA TANGQSSELETAAAKQRRVLETIVTMIPGDAGAVTGRFLLRLLRVASYVGASPSTRAQ LVRQAGAQLDEARAVDLLVPMPSSSDPPAYDVGAAEAVLEHFLALFQRPAPPDERRRM SAAMEKVARTFDEYLRAVALHADFPVGKFVDLAECLPDIARNDHDGLYHAIDTYLKEH PELSKADKKRLCRMIDCRKLSPDVRAQAISNDRMPLRTIVQLLFVEQERAMGGGGASG SNSAVAPDAIAMLAARKEKEDEPPAPAADHKSDVHRPRGDHGERARADGAAMTRSLSA STTKTAGAAAPRTAESRGSRMRNK</aaseq>

Gene Sequence

<dnaseqindica>1713..2141#880..1629#1..72#tggtccgagagccgcatcgtccagccctgcgtcgacgccatcgtcgagaagatcctcacgcccccctccaaggtagatgctttgtccttcgcgccaaattttgattttgaaagccatttgaagttttttttttcccgtttctttcttgattttggcgcggaaacggttgatgaccgcagattatagatgaatacaagtgaaatttacacaaattttgccaaaaattaaaattcatttggctttttaaacaccatgaaattttaaaataaaacgttgtcatacattttaaaacctaaaaccatgtaaccatcaagccggttttgtgcattgtagagaaagtagtgatgtggcaatggcgacaaattcactacaccaaccactttctagtaatatgtttctatattgtaccaatcacgctcatataaataaggatatagtataattatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaaggtagaagtaaataaggatatagtataagtatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaaggtagaagtaaataaggatatagtataagtatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaagatagaagacaggaggaggatgattccacttttatatagtaataacagagaaaagtataaataacagtttattagatcgtttttaaatacaaatcgagcctgacctaattcgtagcagccgaacccagttttatttcttttgagatatgaaccgaatttagctcgtatttgacgaaatttctgtgaaaaattcataaatgagcgtaaatatttgtgcaggttacgtggtcgtacacctacacgaggcctgggtacgcaaagaaggcccaccagtcagtgcccaaggactggtggacggaggacgtgtcggagctggacatcgacgtcttccgctccctcctctccaccgtctgcgccgcccgcctcctcccgccgccgctcatcggcgaggccctccacgtctacgcctgcaagcacctgcctgacccgctcaaccacgccgccgccgccgccaccgccaacggccagagctctgagctggagacggcggcggcgaagcagcgtcgcgtgctggagaccatcgtcaccatgatccccggcgacgccggcgcggtcaccggccgcttcctgctccggctgctccgcgtggcgagctacgtcggcgcgtcgccgtcgacgcgcgcgcagctggtccggcaggccggggcgcagctcgacgaggcgagggcggtggacctgctcgtcccgatgccgtcgtcgtcggacccgccggcgtacgacgtcggcgccgcggaggccgtgctcgagcacttcctggcgctgttccagcggccggcgccgcccgacgagcggcggcggatgagcgccgccatggagaaggtggccaggacgttcgacgagtacctccgcgccgtcgcgctccacgccgacttccccgtcggcaagttcgtcgacctcgccgagtgcttgccggacatcgcccgcaacgaccacgacggcctctaccacgccattgacacctatctcaaggtcacagaatcaatcacaccgtcaaaataccagctaaattaattgatcattcgagctgataagatcaacaatggcgtatgcaggagcacccggagctgagcaaggcggacaagaagcggctatgccggatgatcgactgccggaagctgtcgccggacgtgcgggcgcaggcgatctccaacgaccggatgccgctgcgcaccatcgtgcagctgctcttcgtcgagcaggagagggccatgggcggcggcggcgcaagcggcagcaacagcgccgtcgcgcccgacgccatcgcaatgctcgccgcaagaaaggagaaggaggacgagccgccggcgccggccgctgaccacaagtcggacgtgcaccggccacgcggcgaccacggcgaacgcgcccgggcggacggcgcggcgatgacgaggtcgctctcggcgtccaccaccaagacggccggcgctgccgcgccgaggacggcggagagtagggggagcaggatgaggaacaagtaaatcaatggtggtcgcccatgaatggatgacattcttgtttcttctgatcccttgcttgaaatttgttgatacttgtgattcttgatttttttttcttttggtattctttttctattttcttcttcattttgatttcagtgcatcccatttttggtgggagatgtgagggccatattgttgaaagagggaagagaatgaggggtagattttgtaattaaatggatgggggataataagaggctataatcatacgacctagcatagctcaccaatcaagaaaaatgtccatcttcatcattcattccacatatgtatctactgttaccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0266600, RefSeq:Os09g0266600