Os03g0823800

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0823800| Description = Similar to Permease 1| Version = NM_001058280.1 GI:115456288 GeneID:4334620| Length = 3741 bp| Definition = Oryza s...")
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Gene Name

Os03g0823800

Description

Similar to Permease 1

Version

NM_001058280.1 GI:115456288 GeneID:4334620

Length

3741 bp

Definition

Oryza sativa Japonica Group Os03g0823800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35448200..35451940

Sequence Coding Region

35448432..35448650,35448742..35448902,35449001..35449078,35449591..35449682,35449792..35449850
,35449955..35450041,35450137..35450233,35450379..35450563,35450641..35450700
,35450787..35450862,35450971..35451071,35451186..35451362,35451449..35451546
,35451652..35451751

Expression

GEO Profiles:Os03g0823800

Genome Context

<gbrowseImage1> name=NC_008396:35448200..35451940 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35448200..35451940 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccggcgccgaagcaggaggaactgcagccgcacgcggtgaaggaccagctgccggccatctcctactgcctcaccagccctcccccatggccggaggccatcctgctcggattccagcactacctcgtcatgctcggcaccacggtcatcatccccaccgcgctcgtcccccagatgggcggcggcaatgaggagaaggcgcgggtgatccagacgctgctgttcgtcgccggcatcaacacgctgatccagagcttcctcggcacgcgcctgcccgccgtcatcgggggctcctacaccttcgtcgcgcccaccatctccatcatcctcgccggccgctacaacggcattgccgatccccacgagaaattcgtgcgcatcatgcggggaacgcagggcgcactcatagtggcctccacgctccaaatcatcatggggttcagtgggctctggcggattgtcgtcaggctgctgagcccactgtccgcagcaccattggttgcgcttgttggatttgggctctatgagcttggattcccaagtgttgccaaatgtgtggagattggccttccacaaatcatactgctggtggctctttcccagtacatacctaagctggtgcctttgttggggactgcgttcgagcgtttcgccatcataatgtctgtggcccttgtctggctttacgccttcttcctgactgttggtggggcgtacaagaatgctgctccgaagacacaatttcactgtcgaactgatcgatctgggcttgtagggggtgctccatggataagtgtaccttacccattccagtggggagcaccaacgtttgatgctggtgaagcttttgcaatgatggcagcttcttttgttgctcttgtggagtctactggtgcattcattgctgtctcacggtacgccagtgcaacaccatgccctccttctgttatgagtcgcggcattggttggcagggggttggtattttgctgggtggcttatttggaacagctaatggatcatctgtatctgttgaaaatgctggtttgctaggtttgacacgtgttggcagcagacgtgtggtgcagatttctgctggatttatgattttcttctctattcttgggaaatttggagcggtatttgcttcaattccaggcccaataattgcagctatatactgtcttctctttgcatatgtcggtatggcaggagtagggttccttcagttttgcaacctgaacagcttccgaacaaaattcatcgtgggattctccgtgtttatgggtttgtcggttccacagtatttcaacgagtacacctctgttgcaggctatggcccagtacacactcacgcaagatggttcaatgatatgatcaatgtggtattctcgtcaaaagcattcgtcggaggcgctgtagcatatttgttggacaataccctccagaggcatgacagcactgccaggaaggaccgggggcaccatttctgggacagattcaggtcgttcaggacagacccacgcagcgaggagttctactctctgcctttcaacctcaacaagttcttcccatccttctga</cdnaseq>

Protein Sequence

<aaseq>MAAPAPKQEELQPHAVKDQLPAISYCLTSPPPWPEAILLGFQHY LVMLGTTVIIPTALVPQMGGGNEEKARVIQTLLFVAGINTLIQSFLGTRLPAVIGGSY TFVAPTISIILAGRYNGIADPHEKFVRIMRGTQGALIVASTLQIIMGFSGLWRIVVRL LSPLSAAPLVALVGFGLYELGFPSVAKCVEIGLPQIILLVALSQYIPKLVPLLGTAFE RFAIIMSVALVWLYAFFLTVGGAYKNAAPKTQFHCRTDRSGLVGGAPWISVPYPFQWG APTFDAGEAFAMMAASFVALVESTGAFIAVSRYASATPCPPSVMSRGIGWQGVGILLG GLFGTANGSSVSVENAGLLGLTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPGPII AAIYCLLFAYVGMAGVGFLQFCNLNSFRTKFIVGFSVFMGLSVPQYFNEYTSVAGYGP VHTHARWFNDMINVVFSSKAFVGGAVAYLLDNTLQRHDSTARKDRGHHFWDRFRSFRT DPRSEEFYSLPFNLNKFFPSF</aaseq>

Gene Sequence

<dnaseqindica>3291..3509#3039..3199#2863..2940#2259..2350#2091..2149#1900..1986#1708..1804#1378..1562#1241..1300#1079..1154#870..970#579..755#395..492#190..289#gtgcagtgtgcgtgagtcatcgcggagtcgtcagtgtttcatcgtgtgcgccgcgccgctgcgtgcagtgcgttgcgttcctccactcccgcggcgaccgcttcaactcgcgcatctcgaggaggccggctcggctgctgcgcctcactctcactctcactcacactgcagtggtggtagtggtaggcaatggcggcgccggcgccgaagcaggaggaactgcagccgcacgcggtgaaggaccagctgccggccatctcctactgcctcaccagccctcccccatggcgtcagtgcccattccctctctcatcctctctctctgcattccaggagtggatcgatcgatctccatggttggctgcttgacggcgccttcggtttctttctgcagcggaggccatcctgctcggattccagcactacctcgtcatgctcggcaccacggtcatcatccccaccgcgctcgtcccccagatgggcggcggcaatgtacgtcccctcctcccgccgccgccgcggcgtcgcaccgctcacttgcttctgtgactcactcatttggctgccgatggatgcaggaggagaaggcgcgggtgatccagacgctgctgttcgtcgccggcatcaacacgctgatccagagcttcctcggcacgcgcctgcccgccgtcatcgggggctcctacaccttcgtcgcgcccaccatctccatcatcctcgccggccgctacaacggcattgccgatccccacgaggtcgccctcctcactcccccccgcacccacgcaaagtttgctcctcttctgtttgactccttgctgtattgacactgacaaatgtggcgtgctgggttcggcatggcgttgcagaaattcgtgcgcatcatgcggggaacgcagggcgcactcatagtggcctccacgctccaaatcatcatggggttcagtgggctctggcggattgtcgtcaggtgtgcatgtctcatcctcagggttcagattccaggtcgtttgatcagtgtaccttaactggccctatcattctgctaattcatgtttatattcttgtaatgttgcaggctgctgagcccactgtccgcagcaccattggttgcgcttgttggatttgggctctatgagcttggattcccaagtgtgagtattttgtactacaattgtacatgtacagtcgtctggatgtatttgcaacagtggtatgacagcataaatttactatgcaggttgccaaatgtgtggagattggccttccacaaatcatactgctggtggctctttcccaggtatacatcaagatggctattgtgtgaattctaacggtggatgaatccttatgaatgttgtgtaaatctttgtgcagtacatacctaagctggtgcctttgttggggactgcgttcgagcgtttcgccatcataatgtctgtggcccttgtctggctttacgccttcttcctgactgttggtggggcgtacaagaatgctgctccgaagacacaatttcactgtcgaactgatcgatctgggcttgtagggggtgctccatggtaataccatgcatctatttccatgccatcctaacgtcggaaaggcgttacattacatctgtttgcatttatatcctgcaattggcagtttggcactaaagaaaagattagctaatataaatagattttcgtctgcattttataggataagtgtaccttacccattccagtggggagcaccaacgtttgatgctggtgaagcttttgcaatgatggcagcttcttttgttgctcttgtggaggtactgtggatatatctatggtttttagggggaggtgcagtatgttagagggcattatgcatcaaccagctaatattccttactgtctaatgcagtctactggtgcattcattgctgtctcacggtacgccagtgcaacaccatgccctccttctgttatgagtcgcggcattggttggcaggtaccatctagactccttaatctgcaaatattttgtccgagttcttgacaattcaaatggcatgcaggcatcttacctactttatttgtttgtgtgttgcctagggggttggtattttgctgggtggcttatttggaacagctaatggatcatctgtatctgtgtaagtacattctagattactgttgcctatattttactgttttatacagtttcatattaatactagcatttgatgttggtctgagatactttgtaccgttctggaacagtgaaaatgctggtttgctaggtttgacacgtgttggcagcagacgtgtggtgcagatttctgctggatttatgattttcttctctattcttggtaagcctaatgctttgatgtaattatgtatttagatggttttgatcgtactcttctgtcaagtaaagatgtatttgtgagtttgtgagagtggaaaaggtgaagttctatatccaggctgttatccatgacctgatcaagtatttcctgtaatgttcagaggtggtttgttaatggttccaacgactgatagctggataaatagctaagcttaaaatcagttcatgaatagtttctcaaggagccgcagttagccagaagctgaatattacaggaaatactattgcacaatagcaaggctgacactgactcagatttaactaaagttaaagtcgtgattactgcataaaaacctatacttgtgatgttctctcaggctttcataatttcttttgcttatttaagcttatcatcttgtcatacaactttaaagcatccttgttatgctcctgcaatactgacaataagcatgtacttcatctggttgtactgattctgtgttgcgttcctagggaaatttggagcggtatttgcttcaattccaggcccaataattgcagctatatactgtcttctctttgcatatgtcggtatgtacaatgaagagaatcttaaatgataaatctagctttctttctatcatatttgaattatgaacacctgcaatatatttggtttctgtccacaggtatggcaggagtagggttccttcagttttgcaacctgaacagcttccgaacaaaattcatcgtgggattctccgtgtttatgggtttgtcggttccacagtatttcaacgagtacacctctgttgcaggctatggcccagtacacactcacgcaagatgggtaagacccagtaaatatactcaagtgttactactcctttcatgaacctaacaattgatggttatgtttgttcctgtttgctctttcccagttcaatgatatgatcaatgtggtattctcgtcaaaagcattcgtcggaggcgctgtagcatatttgttggacaataccctccagaggcatgacagcactgccaggaaggaccgggggcaccatttctgggacagattcaggtcgttcaggacagacccacgcagcgaggagttctactctctgcctttcaacctcaacaagttcttcccatccttctgattttgcacgccagtgttttgtatcaaattgggatagcattgtagtacgattagttcttgggtaagtaattctagcattgccagattgttgtttctcctagtgtttttatactcctgagttctgaatcctgcagaccccagtgtaaaactatctgaggaaggagaaatgactcggtatttttgggtgtatattagttcggattaacagttaaatcaacaaactgaaaatgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0823800, RefSeq:Os03g0823800