Os03g0824100

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Revision as of 13:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0824100| Description = Smr protein/MutS2 C-terminal domain containing protein| Version = NM_001058283.1 GI:115456294 GeneID:4334623| Length...")
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Gene Name

Os03g0824100

Description

Smr protein/MutS2 C-terminal domain containing protein

Version

NM_001058283.1 GI:115456294 GeneID:4334623

Length

3836 bp

Definition

Oryza sativa Japonica Group Os03g0824100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35460787..35464622

Sequence Coding Region

35461270..35461606,35461797..35461904,35461994..35462308,35463174..35463589,35463678..35464438
,35464484..35464622

Expression

GEO Profiles:Os03g0824100

Genome Context

<gbrowseImage1> name=NC_008396:35460787..35464622 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35460787..35464622 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtattccatgacctcccctccgagtcgcgcaccgcgctctcctacacctccctcatcgccgcctacgcgcgcaacgcgctgcacgaggaggcccgcgagctgctcgaccagatgaaggcctccggcgtcgcgcccaccgatccgccggtcccgttcgacatgctgctcggcctcttcgctgaaatgcgccatgacccttccccctccgttcgtcccgacctcaccacctacaacaccctcctcgccgctgccgctgtacgcgctctctccgaccagtccgagatgctgctgcgcaccatgctcgaggccggtgtcttgccggacaccgcatcttaccgccacattgttgatgccttcgctggtgctggtaacctctcccgtgtggccgagctgtttgccgagatgtcagcaacggggcacactccagacccatctgcgtatcttgggctgatggaagctcacacgctggttggtgccactgctgaagcggtagctgtgctgcggcagatgcaggctgatggctgtccgccgacagctgcgacataccgtgtcttgcttgatctgtatggcagacaggggaggtttgatggcgtgcgcgagctcttccgcgagatgagaacaactgtacctccagacacagccacatacaatgtcctgttccgcgtttttggggacggtggcttcttcaaggaggtggtggagctcttccaagatatgcttcactctgaagtagagcctgatattgatacatgtgaaaacgtcatggttgcgtgtggtcgtggtggactccatgaggatgcaagggaagttcttgactatatcacaacagaaggaatggtgcctactgcaaaggcctacactggcctagttgaagcgcttggccatgcagctatgtatgaggaggcttatgttgcattcaacatgatgactgaaattggaagcttgccaactatagagacctacaatgctcttgcaaatgcatttgcaaagggtggccttttccaggaggctgaggccatcttttctcgaatgaccaacaatgctgctattcagaaagacaaggattcattcgatgctctcattgaagcgtattgccagggtgcacagttagatgatgcagttaaggcatacatggagatgcggaagtccaggtttaatccagatgaacgctcccttgagggggtactcaatgcctactgcatagcaggtgttatagatgagagcaaagagcagtttgaagaacttcagtccatggtgactgttcctagcattattgcttattgcatgatgttgtcactctatgccaggaatgacaggtggacagatgcttatgatctgttggaagaaatgaaaacaaaccgtgctagtagtacacatcaagtgattgcttccatgatcaaaggggagtatgacgatgactccaattggcaaatggtcgaatatgttcttgacaacagtaacttggaaggctgtgactacagtttacgattctttaatgcactccttgatgtcctttggtggtttggccagaagggtcgagctgcaagggttttggatcaagcattaaaatatgggctcttccctgagttatttcgtgataccaagctggtctggtctgcagatgtgcataggatgtcagtaggtggatcattagtggctgtgtcagtgtggctcaataaactttatgatagactaaaaggcgatgaagatcttcctcagttagcctcagttgttgtattgaggggacaaatggagaaaagcacagttacaaggggattgccgattgcaaaagttgtgtactcttttctgaatgatacactatcatcatccttccattatccaaaatggaacaagggacgaatcatatgtttgaagtcccagttgaaaaagctccaggcagccatagattcttccaatggtgctgcaatttctggttttgttcccatgacaaactctcatttgccatcccctggttccaaattgtacactagggagtcccaagctgataatggttctgcccatttgactgatgaaaccttggtagaagaaaaggaatcagaactccttgcactgtga</cdnaseq>

Protein Sequence

<aaseq>VFHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVA PTDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGAT AEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTATYNV LFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITT EGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLF QEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSL EGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEM KTNRASSTHQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWF GQKGRAARVLDQALKYGLFPELFRDTKLVWSADVHRMSVGGSLVAVSVWLNKLYDRLK GDEDLPQLASVVVLRGQMEKSTVTRGLPIAKVVYSFLNDTLSSSFHYPKWNKGRIICL KSQLKKLQAAIDSSNGAAISGFVPMTNSHLPSPGSKLYTRESQADNGSAHLTDETLVE EKESELLAL</aaseq>

Gene Sequence

<dnaseqindica>3017..3353#2719..2826#2315..2629#1034..1449#185..945#1..139#gtattccatgacctcccctccgagtcgcgcaccgcgctctcctacacctccctcatcgccgcctacgcgcgcaacgcgctgcacgaggaggcccgcgagctgctcgaccagatgaaggcctccggcgtcgcgcccaccgccgccacgtacaacaccgtgctcgccgcctgcgctcgcgccaccgatccgccggtcccgttcgacatgctgctcggcctcttcgctgaaatgcgccatgacccttccccctccgttcgtcccgacctcaccacctacaacaccctcctcgccgctgccgctgtacgcgctctctccgaccagtccgagatgctgctgcgcaccatgctcgaggccggtgtcttgccggacaccgcatcttaccgccacattgttgatgccttcgctggtgctggtaacctctcccgtgtggccgagctgtttgccgagatgtcagcaacggggcacactccagacccatctgcgtatcttgggctgatggaagctcacacgctggttggtgccactgctgaagcggtagctgtgctgcggcagatgcaggctgatggctgtccgccgacagctgcgacataccgtgtcttgcttgatctgtatggcagacaggggaggtttgatggcgtgcgcgagctcttccgcgagatgagaacaactgtacctccagacacagccacatacaatgtcctgttccgcgtttttggggacggtggcttcttcaaggaggtggtggagctcttccaagatatgcttcactctgaagtagagcctgatattgatacatgtgaaaacgtcatggttgcgtgtggtcgtggtggactccatgaggatgcaagggaagttcttgactatatcacaacagaaggaatggtgcctactgcaaaggcctacactggcctagttgaagcgcttggccatgcagctatgtatgaggtcagatgttgtatcatatattgatgaattgactcttaagataccccttttgtgataaaatgtttcatgatgttatatttgattccaggaggcttatgttgcattcaacatgatgactgaaattggaagcttgccaactatagagacctacaatgctcttgcaaatgcatttgcaaagggtggccttttccaggaggctgaggccatcttttctcgaatgaccaacaatgctgctattcagaaagacaaggattcattcgatgctctcattgaagcgtattgccagggtgcacagttagatgatgcagttaaggcatacatggagatgcggaagtccaggtttaatccagatgaacgctcccttgagggggtactcaatgcctactgcatagcaggtgttatagatgagagcaaagagcagtttgaagaacttcagtccatggtgactgttcctagcattattgcttattgcatgatgttgtcactctatgccaggaatgacaggtaactatcaaagaaaccttcatgctgttttaattaaaacttatgtggttctgattgtaaatgtaaagcattgagagtgataaatagggaataactttaatcaactaaactggctggttttggggctgtagaaaaatatatttggactagctatgtggggcccaaatgtcagccacaaggaatgtttaaaggagtaaagatttgattaatcacataaatgaccataaaaatatatttagatttgattaatcactatatggaatttgaaatataaattttatatatgaccataaaaaaacttcctctaagtaacatggggctaggtctaggggcaatcgcatgtctgttttgtgaaattccataaaatttgaatggcggtttgatagattaggaattctaccccctttgttggtccagttaacttgatatgccatatgcggcatgtaatgctgtaagtctgtaacacacttgttgctccaatcttgcaattttactctcatttcatacgctgcagaactttattactctaccgattcatatttctagagaccacttgtttctttatggttcttgaggggtttgaattcatatttgtaccttaaaatttgagaaagatctgggctgtgatatctttccttttttcctttgttctctcttcctgttatttatcctgcttaaatcatttagagttttgaccagcatcattcaggtagcattgataggcacaaggccaaaacttgaatactttgatctaaaagcacttaatattagaacaacacaaggtactataaatgatgtggacatcaaaatttctagaatccttaaaatgtaatgaaactacaacataaccgatgtacaatttcaggtggacagatgcttatgatctgttggaagaaatgaaaacaaaccgtgctagtagtacacatcaagtgattgcttccatgatcaaaggggagtatgacgatgactccaattggcaaatggtcgaatatgttcttgacaacagtaacttggaaggctgtgactacagtttacgattctttaatgcactccttgatgtcctttggtggtttggccagaagggtcgagctgcaagggttttggatcaagcattaaaatatgggctcttccctgagttatttcgtgataccaagctggtctggtctgcagatgtgcataggtaatattatttatcactctcatctggttctgtgagtgatccagtttttttattcgtcaagcggtgcttaaggttgtttgcatttgcaggatgtcagtaggtggatcattagtggctgtgtcagtgtggctcaataaactttatgatagactaaaaggcgatgaagatcttcctcagttagcctcagttgttgtattgtaagcttttagcttaagatttaccatgttctatagttatatcatgatatgttctagcactgttctggaatcgagttcgtgattcccatgattatttcttgtcttttcacttgcataaagaaatgcaatacgtagctacttatacatttttccgtttgctctaattgactgacagttctctgattgccaggaggggacaaatggagaaaagcacagttacaaggggattgccgattgcaaaagttgtgtactcttttctgaatgatacactatcatcatccttccattatccaaaatggaacaagggacgaatcatatgtttgaagtcccagttgaaaaagctccaggcagccatagattcttccaatggtgctgcaatttctggttttgttcccatgacaaactctcatttgccatcccctggttccaaattgtacactagggagtcccaagctgataatggttctgcccatttgactgatgaaaccttggtagaagaaaaggaatcagaactccttgcactgtgagttttcaggagcttgctgcctccttccttttgcagatgcgatgttatctggccgaacaagggaagataagacacagaatgtctcacaattttgaagtttgggcaatcagatcgtcctaatgtgcaatgagatggccttatgcctttgcagtgctctcttgcttcactatatgcagtggacgtgactcccaatatccacaatcttgcctagaacccagcacataagcatgagttcgtgatactggatttgcgctaacttgatagacaatgctggacttccagttgtgtttcaggatgtagcacttagtagggagaatcagagtatgcatgttgttgttagttgctcacttgttctatatgacatttcgtgcctgccccattcggcaagaacgaaccctgtctggaatatatggattcactcgatgcaagtaaaacatgctgatgagtcagtggaacacatcagtcatcgatacgtttctgatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0824100, RefSeq:Os03g0824100