Os03g0832200

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0832200| Description = Similar to Calcium-binding protein precursor (Calreticulin)| Version = NM_001058334.1 GI:115456396 GeneID:4334675| L...")
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Gene Name

Os03g0832200

Description

Similar to Calcium-binding protein precursor (Calreticulin)

Version

NM_001058334.1 GI:115456396 GeneID:4334675

Length

3706 bp

Definition

Oryza sativa Japonica Group Os03g0832200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35802933..35806638

Sequence Coding Region

35803279..35803437,35803512..35803556,35803701..35803748,35803838..35803933,35804014..35804081
,35804180..35804237,35804330..35804416,35804551..35804598,35804907..35804963
,35805072..35805330,35805424..35805616,35805715..35805822,35806432..35806534

Expression

GEO Profiles:Os03g0832200

Genome Context

<gbrowseImage1> name=NC_008396:35802933..35806638 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35802933..35806638 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatccccagaaggtcggcggccgccgtcgctgccgtggtggcgctcgcgtccgtggccgctgtcgccggcgaggtcttcttccaggagaagttcgacgatggatgggaggatcggtgggtcaaatctgagtggaagaaggatgacaacagggccggcgaatggaaccacacctccggcaagtggtacggcgacgccgacgacaagggtatccagacgtcagaggactacagattctacgccatttcggccaagtaccctgagttcagcagcaaggacaagaccctcgtgctgcagttctcggtgaagcacgagcagaagctcgactgcggcggcggctacgtgaaattgctcggtggcgacgttgaccagaagaagtttggtggcgagacgccgtacagcatcatgtttggaccagatatctgcgggtatgccaccaagaaggttcacgctatccttacaaagaacggcaagaaccatctaatcaagaaggacgtgccatgcaagaccgatcaactgacgcacgtctacaccttgatcatccgtcctgacgccaaatacagcattctgatcgataacactgagaagcaaactggaagcatctatgatgattggaacattattcctccaaagaataagagggatcctgaagccaagaagccagaagactgggacgacaatgaatacattcctgatcctgaggacaagaagcctgagggctatgatgatatccctaaggaaattactgacccagaagcaactaagcctgaggactgggatgatgaggaagatggagaatggacagctccaaccattccaaaccctgagtacaagggaccatggaaccaaaagaaacttaagaaccctaattacaagggcaaatggaaggcaccattgatccccaacccagattacaaggatgatccttacatctacgcttttgatagtttgaaccacattggcattgagctgtggcaggttaagtcgggaactttgtttgacaacattcttatcactgatgaccctgagtatgccaagaaatttgcagaagaaacctgggccaagcataaagatgctgagaaagccgcctttgatgaagctgagaagaagaggcttgaggaggaatctgcaaactctaaaatcgacgacagcgacgacgacgctagtgatgatgaggatgaggcggacgatgacaaggctgatgtcgttgctgagcagaccaaggacaagggtgatgagaaaccgcaggacatcaaggtctctgctgatgagaagccaaagagcagcaaggatgattcttccgctgcgaagaaggacgagctttag</cdnaseq>

Protein Sequence

<aaseq>MAIPRRSAAAVAAVVALASVAAVAGEVFFQEKFDDGWEDRWVKS EWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFS VKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKN HLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPE AKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPEDWDDEEDGEWTAPTIPNP EYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIELWQVKSGTLF DNILITDDPEYAKKFAEETWAKHKDAEKAAFDEAEKKRLEEESANSKIDDSDDDASDD EDEADDDKADVVAEQTKDKGDEKPQDIKVSADEKPKSSKDDSSAAKKDEL</aaseq>

Gene Sequence

<dnaseqindica>3202..3360#3083..3127#2891..2938#2706..2801#2558..2625#2402..2459#2223..2309#2041..2088#1676..1732#1309..1567#1023..1215#817..924#105..207#attttctcaggtggttttctggttcagtggagaaaaaaaaaggttagaattagacttctttggaaggttctagaggtttctagataccgccgtcccggggggtgatggcgatccccagaaggtcggcggccgccgtcgctgccgtggtggcgctcgcgtccgtggccgctgtcgccggcgaggtcttcttccaggagaagttcgacggtgagtcgccggatctaacaacctgtgtcgtcgtgtaatgtggatccagtagactggtaatgcgtttgaatttttttcgttggttcgttggatgatgacgttgatctggtcagtttcttagcctgttcatgatgcatgatcccgttgtttccgtggaattcatcagtggcatttgcgacgaagcgagtctgaggaattctggagttcatgtgccatctcgtaaccgttactgttttggcctcgcgatccacagctttaggatgttcccgtttgcggtttcaaaaaaaagatgttcccgtttgcgtggcgcaccgtttttgcttcgcatgaatggatccatttagttttttttttttaacggaaggatccatttagtttcagtagtctcagtagcgatcgcgtgctttctacgcgttcatttctcagatctccggagaattcgaagggaaaataggatttcctttcgtgaaaaattaaggccggggttcagggtttattacttgattttttgagagattatttttttcctcttttccctgatcctgttggtggatatgtagaatattaaaattggttggtttctgaattctgaattgtgtgtgaaaacagatggatgggaggatcggtgggtcaaatctgagtggaagaaggatgacaacagggccggcgaatggaaccacacctccggcaagtggtacggcgacgccgacgacaagggtgaggatcgatgcacacaccacgctgctgatttcgttttttcttctttttttttttctgttcaggcatgtgcgaagttactctgcttctctgtgcaggtatccagacgtcagaggactacagattctacgccatttcggccaagtaccctgagttcagcagcaaggacaagaccctcgtgctgcagttctcggtgaagcacgagcagaagctcgactgcggcggcggctacgtgaaattgctcggtggcgacgttgaccagaagaagtttggtggcgagacgccgtacaggtgatggtttaatttgatcacttcgcattcccctctgtgtgctcatttcagagcgcaacatctttgattgatcagtttcttttgaaattgcagcatcatgtttggaccagatatctgcgggtatgccaccaagaaggttcacgctatccttacaaagaacggcaagaaccatctaatcaagaaggacgtgccatgcaagaccgatcaactgacgcacgtctacaccttgatcatccgtcctgacgccaaatacagcattctgatcgataacactgagaagcaaactggaagcatctatgatgattggaacattattcctccaaagaataagagggatcctgaagccaagaaggtaacttagagataattcactggttgttctgacttctgaataggctgtctatgctcttctatttttacagaggtcataacttatatggtaatatgttactgtttgcagccagaagactgggacgacaatgaatacattcctgatcctgaggacaagaagcctgaggttgctttcctttgtttgtgcaactttagatgatatttctgtctgaagattaattgagtttttactaataccactctactgagattctgcatgaaaatgggtggcaatactgcactgtatgttgtgagcttgctgctactcagatagcagcagagtacattgcactacccattttattttgagtaaatctaaccacactaccacagcacagcattataaatttctaaactgaactatatatactgttattttcccttgatgcttctctctgatggtttcttttacttatgaataattgtcgtttgaagggctatgatgatatccctaaggaaattactgacccagaagcaactaaggtatgtgttgccatttttattttaaatggacattttccattcttctcatacaagttcgatgagatgcatcaaccagtatgcgatttcacatcattttgtccaacatgcaacttcacattatgcaatctgtacagcctgaggactgggatgatgaggaagatggagaatggacagctccaaccattccaaaccctgagtacaagggaccatggaaccaaaaggtatgagtgtgactgaatagttcatttactctagacaagctaggttcagcatcacgattactcactaattgcatgaaattttgtgtgtttagaaacttaagaaccctaattacaagggcaaatggaaggcaccattgatccccaacccaggtatacaccaaacatattttttctagaaagaaacaaggtaatccagcgatttgtatatgcttttatcgctcatgtgaattcctttcttgtttgtgcagattacaaggatgatccttacatctacgcttttgatagtttgaaccacattggcattgagctgtggcaggttagtgctgaattccatgaaactgaaattaatttctgtagttctgttgaaacattaataattcaatgtattggtaacaggttaagtcgggaactttgtttgacaacattcttatcactgatgaccctgagtatgccaagaaatttgcagaagaaacctgggccaagcataaagatgtgtgttgtcttatctttggtgcacattactgttttattttgtttcagtttctagttgtgaagaattaaatcgtgatttgtctgtgtaggctgagaaagccgcctttgatgaagctgagaagaagaggcttgaggaggtaggcaggaaattttctttttctgagccatatcttgctgttgcttcttgtttgaactatagatgcagaaaataacctgtaatacatgacagaactaacaaaagcatttttcagctctaacttttaattgttccttcttgctaggaatctgcaaactctaaaatcgacgacagcgacgacgacgctagtgtaagctccagaccgcgctagatacagtatacactaaccttgtgctaaacaccatgccataatttgtatgtcaggatgatgaggatgaggcggacgatgacaaggctgatgtcgttgctgagcagaccaaggacaagggtgatgagaaaccgcaggacatcaaggtctctgctgatgagaagccaaagagcagcaaggatgattcttccgctgcgaagaaggacgagctttagatattttattattattagatgataatatgtcatgacgaagaggcaactgaatcaggtgttggtgctaaatatttcctaagcaggggatcagagaagaggagcagagaagcttgtgctagttttaactggtttctttacttgcttgcttgagggctgaacagtacacttgcttgtacgttgggcagcacaccatcatcagtctatacacatgcactggctttctatttataggcttgataaaccgatatgtaagaagcttcaggacctagctagagacttgtagtactactacattgtcaaacttcactggtactagtactactgtaaaatcacatcatgcatgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0832200, RefSeq:Os03g0832200