Os10g0370700

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0370700| Description = Similar to Nitrate transporter (Fragment)| Version = NM_001070995.1 GI:115481733 GeneID:4348473| Length = 3805 bp| ...")
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Gene Name

Os10g0370700

Description

Similar to Nitrate transporter (Fragment)

Version

NM_001070995.1 GI:115481733 GeneID:4348473

Length

3805 bp

Definition

Oryza sativa Japonica Group Os10g0370700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11948299..11952103

Sequence Coding Region

11948493..11949306,11949685..11950211,11950305..11950522,11950620..11950722,11950964..11951014

Expression

GEO Profiles:Os10g0370700

Genome Context

<gbrowseImage1> name=NC_008403:11948299..11952103 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11948299..11952103 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcatctgatgaggacaggccactgattcatcacctgcctccacaggaacaatgttcaaaatacacatgcgatggaacggttaatattgacagtaagcccgcgctgaagcagagtacggggaattggagagcatgtttcttcattttaggtgttgaattcactgaatgcatctgcttctacggggtttcaaagaacttagtcacatacctcacaagtgtgctccatgaaagcaacgtcaatgctgcacaaagtgtgtcgatctggatcggcagttgcttcttcacaccactcattggagccttcttggctgacacatattggggaagatactggacagtagtaatgtccatccttgttatcatccttggaatgatcgttctgacggtttcggcatcaccattgttcctgaatgcttctttctacaatgggggtatttctcgtctaactgtctacctagggctctacctttttgcccttggaactggaggtataaagccaaacattccggccttcggagctgatcaattcgacggcgccgacccggtggagcgggtgacaaagggctcattcttcaactggtactacttctcaatcaacgtgggctcgctgctgtcgtccaccgtggttgtctgggttcaggacaacatagggtggagtgtcggttttgctggcccaatgctactcttggggttcggcctcgccatgttcatcgccggtaggagggcgtacaggtacaagaaactgggagggagccctctgacaagggtctttcaggtgctggttgcagctgtaagaaatcataggctgaacttgcctgatgatagctcactcctgcatgagcttccaggagtgactgaaggtgactacagaactcaacatacctatcaattcaggtttttggacaaggctgccatcttgtcggacaagaactgcgcgccggcggcgccgtcgagcccatggaggctgtgcaccgtgtcgcaggtggaggagctcaagatgctgctgcggacgttcccggtctgggcgtcgctggtcggcttcttcatggtgaccgcgcagatgacgtcgaccctgatcgagcagggcgtcgccatggacggccgcgtcggccgcttcaccgtgccgccggcctcgctcgccaccttcgacgtcgtcgccgtcctcgccctgatcccggtctacgacgccgcgctggtgccgctggcgcggcgcgtcaccggcagggacaggggcgtctcgcacatgcagcgcatcggcgtcggcctcgcgctgtccgcggtggccatggcgtactcggcgctggtcgaggcgcggcgtctggcgatggcggcggcggcggcggggacgcggatgagcatcgcgtggcaggtgccgtccttcttcgtgctgggcgccggggaggtgttcgccgtcatcggcatgctggagttctgctacgagcagtcgccggcgtcgatgaagagcctcggcacggcgctcgtgcagctcgccgtcgccgtcgccaactacctcaactccggcatgctcagggtggtggcggcggccacggcgcgcggcggcggcgccgggtggatcccggacaagctcgacgagggccatctggactacttcttctggatgatggctgcactcagcgtgctcaacctgctgcagttcctgcactgctcaatcagattcagaggcaacaacacactgtcatcatcgtga</cdnaseq>

Protein Sequence

<aaseq>MEASDEDRPLIHHLPPQEQCSKYTCDGTVNIDSKPALKQSTGNW RACFFILGVEFTECICFYGVSKNLVTYLTSVLHESNVNAAQSVSIWIGSCFFTPLIGA FLADTYWGRYWTVVMSILVIILGMIVLTVSASPLFLNASFYNGGISRLTVYLGLYLFA LGTGGIKPNIPAFGADQFDGADPVERVTKGSFFNWYYFSINVGSLLSSTVVVWVQDNI GWSVGFAGPMLLLGFGLAMFIAGRRAYRYKKLGGSPLTRVFQVLVAAVRNHRLNLPDD SSLLHELPGVTEGDYRTQHTYQFRFLDKAAILSDKNCAPAAPSSPWRLCTVSQVEELK MLLRTFPVWASLVGFFMVTAQMTSTLIEQGVAMDGRVGRFTVPPASLATFDVVAVLAL IPVYDAALVPLARRVTGRDRGVSHMQRIGVGLALSAVAMAYSALVEARRLAMAAAAAG TRMSIAWQVPSFFVLGAGEVFAVIGMLEFCYEQSPASMKSLGTALVQLAVAVANYLNS GMLRVVAAATARGGGAGWIPDKLDEGHLDYFFWMMAALSVLNLLQFLHCSIRFRGNNT LSSS</aaseq>

Gene Sequence

<dnaseqindica>2798..3611#1893..2419#1582..1799#1382..1484#1090..1140#agtactgctatagtgtgagctacgattggggagcggcaaccacaccaaccccatctccatctccctcccagaccgacctcccaccgccgcttttgcccttccctctccaatcgtccatcgctcactctcctcaggtctcatctctctctctctctctctccacctggtacttttgctggaatcgatggcttacatatgtttttagaggattttagggatagatataagcatgcttgttgcaggccaaatctttcttcatttttggaattaatactgcacctgaactttttttggataaaaaagaaagtgtatcagctttgaatgaagcctactagttctttatgagtagtgtgtggtcattttcccctggttaaattgtgggatggatgtttgcttcaaagaaataaaagaaattgtgggatggacctgatggttcaaggctaattttgttttgacacttcatttcttaggtttttggtgtgtttgtgttcaagattgaataggacaagacataggggttagctctcaatttaaatgcccaagttaaaaagattgtaataattgtcaaaaaaatttgcatggaatgcttccttctctagaaagtaggaagtctgacggtctgaccccccaaaaaaaggtcagtttgtcctcttctgtttttatgataattactttcctaatttcccagctgacagaagggtgttgcttgcaagaaatagttgtttacagaattatgtagtcaatagagttcatatataacttccagtaccaaaattgcgtgattgtgctaatcaaaatgcagaattggatatgagtaatcaatcagaaaaagtgcgagtgatatgctagtggcctaatgtcactgaattttcagaagaccaagacagcacaaatgggtgttgtcgggtatgtgatgcaatttgttagataatttcttatttatcttctaacaatttcttatctcatcattgcccacatagatggcttacgaaaaattccttaggtgcaagattatactgaattaattgcaagtagcttagagtcgtcggttttcttccaacaaaattgctgaagaagccagaggctcaaatggaggcatctgatgaggacaggccactgattcatcacctgcctccacaggtattaatcgataaccttcccattatcttttttttttttttgcctaggtaggtaccaaacttttgtatctccatgtgaccccatgacatgtacagttgatactttgccactttggcttcagtttgttacacagaaacaaaaaaaatgagttcttgcagtttcttgttcttcagcgaatctttgcatatatttaatgttaaatcctgtgcaacatacattagttttggcatttgtcattcaggaacaatgttcaaaatacacatgcgatggaacggttaatattgacagtaagcccgcgctgaagcagagtacggggaattggagagcatgtttcttcattttaggtacttctgagaagttcacaaaattattctgttgatgctcataaacttccttcttcaacatacacaactgacctattgagtcctgaacatgtcctaggtgttgaattcactgaatgcatctgcttctacggggtttcaaagaacttagtcacatacctcacaagtgtgctccatgaaagcaacgtcaatgctgcacaaagtgtgtcgatctggatcggcagttgcttcttcacaccactcattggagccttcttggctgacacatattggggaagatactggacagtagtaatgtccatccttgttatcatccttgtaaggccaacaagcagagcagcaactgaaagatacaatctgtagttagtttcatgtgtcatttgcaactctgaaacagttctattttgtcagggaatgatcgttctgacggtttcggcatcaccattgttcctgaatgcttctttctacaatgggggtatttctcgtctaactgtctacctagggctctacctttttgcccttggaactggaggtataaagccaaacattccggccttcggagctgatcaattcgacggcgccgacccggtggagcgggtgacaaagggctcattcttcaactggtactacttctcaatcaacgtgggctcgctgctgtcgtccaccgtggttgtctgggttcaggacaacatagggtggagtgtcggttttgctggcccaatgctactcttggggttcggcctcgccatgttcatcgccggtaggagggcgtacaggtacaagaaactgggagggagccctctgacaagggtctttcaggtgctggttgcagctgtaagaaatcataggctgaacttgcctgatgatagctcactcctgcatgagcttccaggagtgactgaaggtgactacagaactcaacatacctatcaattcaggtattgctcattgcatcaaaattaccacaagagttgtcggacaaaatagtcaaacctgttttaatttactatagaacaaactaagtgaattagtaggaacaaattccactgtcaagaaagattcttttaagatattgccatgttattctagaccataatgttttagaagttccaatggttgatttgactcctatcatgtatgagtgtgccatcacttatcaatcaagggtaatatggactttccatagttataaaaggaaataaatgatatacttcgattatgatggtaaatctaaaaacgtagtaaatcttgttatgttaaattgtgtaagtttctataaattgattatttaactttaacatttccatgatgtccaggtttttggacaaggctgccatcttgtcggacaagaactgcgcgccggcggcgccgtcgagcccatggaggctgtgcaccgtgtcgcaggtggaggagctcaagatgctgctgcggacgttcccggtctgggcgtcgctggtcggcttcttcatggtgaccgcgcagatgacgtcgaccctgatcgagcagggcgtcgccatggacggccgcgtcggccgcttcaccgtgccgccggcctcgctcgccaccttcgacgtcgtcgccgtcctcgccctgatcccggtctacgacgccgcgctggtgccgctggcgcggcgcgtcaccggcagggacaggggcgtctcgcacatgcagcgcatcggcgtcggcctcgcgctgtccgcggtggccatggcgtactcggcgctggtcgaggcgcggcgtctggcgatggcggcggcggcggcggggacgcggatgagcatcgcgtggcaggtgccgtccttcttcgtgctgggcgccggggaggtgttcgccgtcatcggcatgctggagttctgctacgagcagtcgccggcgtcgatgaagagcctcggcacggcgctcgtgcagctcgccgtcgccgtcgccaactacctcaactccggcatgctcagggtggtggcggcggccacggcgcgcggcggcggcgccgggtggatcccggacaagctcgacgagggccatctggactacttcttctggatgatggctgcactcagcgtgctcaacctgctgcagttcctgcactgctcaatcagattcagaggcaacaacacactgtcatcatcgtgacgtactccattcttccgtctcaagggctcatgccctgcgtatatactcctgcaaatgtgttctcatttcttgttctgtctccaggattgagaaaacggagtaacaggaagccccggattttattttaacagaaatgtaagtgcaaaacaaataattttataatataagagtaacacaagaatgatcgattaact</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0370700, RefSeq:Os10g0370700