Os03g0832600

From RiceWiki
Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0832600| Description = Similar to Galactokinase (EC 2.7.1.6) (Galactose kinase)| Version = NM_001058338.1 GI:115456404 GeneID:4334679| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0832600

Description

Similar to Galactokinase (EC 2.7.1.6) (Galactose kinase)

Version

NM_001058338.1 GI:115456404 GeneID:4334679

Length

5461 bp

Definition

Oryza sativa Japonica Group Os03g0832600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35825452..35830912

Sequence Coding Region

35825538..35825733,35825830..35826002,35826917..35826963,35827093..35827187,35827281..35827363
,35827878..35827946,35828421..35828606,35828921..35829055,35829321..35829455
,35829695..35829765,35829940..35830017,35830173..35830314,35830487..35830597

Expression

GEO Profiles:Os03g0832600

Genome Context

<gbrowseImage1> name=NC_008396:35825452..35830912 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35825452..35830912 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctcgggtgcccggaggaggaggcgccgccgcggcggcggaggcggaggttgtcccgacgttctcctccctggagccgatctacggcgacggctctccgctcgacgaggcgcgcctccgcttggcccgcctcgccgacaagttccacgccgtctacgccgcgcgccccgcgctcttcgcccgctctccggggcgggtgaatctgataggggagcacatcgactacgaggggtactcggtgttgcccatggccatccggcaggacatgatcgtcgccatcaggagggcagaggggaaggaggtgcgcgtcgccaatgtcgacgacaagtaccccatctgtgtctacccggccgaccccgacaaggaaattgacataaaaaaccacaaatggggccactatttcatgtgtggatacaagggagtttatgagtattgtaggtcaaaagggatagatatgggtggacctgttggccttgatgtagttgttgatggcacagttcctacaggatctggactttcaagctcagcagcatttgtctgttcagcaacaattgctatcatgggagttcttgagaaaaatttcccaaagaaagaagttgcacaattcacctgtcaatctgagcgccacattggaacacaatctgggggcatggatcaggctatatctatcatggccaaacctggatttgctgagttgatagatttcaatccaatccatgccactgatgtgcaactacctccaggcggtacatttgtgattgcccattgcctggcagagtccaagaaagcagagacagctgcaacaaactataacaaccgtgttgttgaatgtcgcctggctgcaattgttcttgccatcaaactagggatggaaacaaaaaaggctgtctcctctgttaccaccctctctgatgttgaggggttatgtgtctcttttgctggaaaagagggttcttctgatcctggagttgccgtgaagaaactattacatgaagaatcatatacaacagaagaaatagagaaaattacaggtcaaagcctgacatctatcttccagagctctcaaacttccttggatgttctaagagcagcaaagcatttcaagttatttcagcgtgcctttcatgtgtactcggaagcaaggcgggtttatgccttcagagatactgtattgtcaaaactcagtgcggaagatatgcttcaaaaactgggcgatcttatgaatgaaagtcactatagctgcagtgtgttatatgaatgcagctgtcccgagttggaagagcttgtaaaagtatgtagagacaacggagcactcggagcacgtcttactggagcagggtggggtggctgtgcagtcgctttggttaaggaaggcattgtcccgcagtttattctcaatttaaaggaaacgtactataaatcaaggatcgaccggggagtgatcaaccagaaggatcttgggttgtacgtgttcgcgtccaagccgtcgagtggagcagccatattcaagctgtag</cdnaseq>

Protein Sequence

<aaseq>MAARVPGGGGAAAAAEAEVVPTFSSLEPIYGDGSPLDEARLRLA RLADKFHAVYAARPALFARSPGRVNLIGEHIDYEGYSVLPMAIRQDMIVAIRRAEGKE VRVANVDDKYPICVYPADPDKEIDIKNHKWGHYFMCGYKGVYEYCRSKGIDMGGPVGL DVVVDGTVPTGSGLSSSAAFVCSATIAIMGVLEKNFPKKEVAQFTCQSERHIGTQSGG MDQAISIMAKPGFAELIDFNPIHATDVQLPPGGTFVIAHCLAESKKAETAATNYNNRV VECRLAAIVLAIKLGMETKKAVSSVTTLSDVEGLCVSFAGKEGSSDPGVAVKKLLHEE SYTTEEIEKITGQSLTSIFQSSQTSLDVLRAAKHFKLFQRAFHVYSEARRVYAFRDTV LSKLSAEDMLQKLGDLMNESHYSCSVLYECSCPELEELVKVCRDNGALGARLTGAGWG GCAVALVKEGIVPQFILNLKETYYKSRIDRGVINQKDLGLYVFASKPSSGAAIFKL</aaseq>

Gene Sequence

<dnaseqindica>87..282#379..551#1466..1512#1642..1736#1830..1912#2427..2495#2970..3155#3470..3604#3870..4004#4244..4314#4489..4566#4722..4863#5036..5146#agagacgaggcgtgaggaagaagacgacgactgattcgctagacagcgcgagaagcggaagaggaggaggcgagagagcaccagcgatggcggctcgggtgcccggaggaggaggcgccgccgcggcggcggaggcggaggttgtcccgacgttctcctccctggagccgatctacggcgacggctctccgctcgacgaggcgcgcctccgcttggcccgcctcgccgacaagttccacgccgtctacgccgcgcgccccgcgctcttcgcccgctctccgggtaggttgatagatggatgggtaccactctaggtttcggtggatgcgtttgatttgatctgacaaggatggattgcgtgtgcgtgtgtgtgtgcagggcgggtgaatctgataggggagcacatcgactacgaggggtactcggtgttgcccatggccatccggcaggacatgatcgtcgccatcaggagggcagaggggaaggaggtgcgcgtcgccaatgtcgacgacaagtaccccatctgtgtctacccggccgaccccgacaaggttaattttgccagcattctactctgctttgcccctgttcctagattaatcctgctcagtttgagtggattttgttaattttttgctttttcgttcgttggttgagattgattgaagaacgtaggtccttatcagttatcgcggggaatgtttttagttgagattctaaagagaaaaagggagagagttttctgtagcgcatcggattccattttttttcggtggaggtagagacaatctccttactattttaggatgggtgggtggttgcgttattaccccattaattaatttattatcataacaagaagcccgtgatacagtttcgttgccctgcccgtgagcttaatttgttgtccccgcgggcttgtggcccacagagataatggtgtggaagtccatgcttcccctttgttttgttttaggctggtggccttcaaatggattgcaaacattccttgtggactcccattcagcccttcgatgggggcttaatactgcattgcatccagcctcatccagccttatcagccaaaatttgaatttttaatcttaaatttggagttgattttgaggttttttcattgaagtttatttttcagccttagcttttaaatcgctaagaacactaatataaaagttttatttataaattatttttcgttttcaaatatgccgaataagccaaacgatgggggccatcatgttgcagttgcaaatggattttcatatactagtactattgcttcattcttaattctatttgacttggaataatatgaaatggaaaatgctatctctggcttcggaattgtgccatgatccgtctgaagttgctgttttttcttagcttcagttatttgattatttctttgatatattgatttggttgttgataaatatttttcatgcaggaaattgacataaaaaaccacaaatggggccactatttcatgtgtgggtaagttaattcttataatattgtataatgttgcataaatagcgaaatttgttcactttttcatacacttcattggccacaagaaaaagaaaacgaacatatcctgtctgttcaattctctatctgcagatacaagggagtttatgagtattgtaggtcaaaagggatagatatgggtggacctgttggccttgatgtagttgttgatggcacagttcctacaggtatatttttgatattttgttttgggattctttcacttccaaataataagcatgttaagtttgacatgattgcgtgttgttactcttatgtaggatctggactttcaagctcagcagcatttgtctgttcagcaacaattgctatcatgggagttcttgagaaaaatttcccaaaggtatcccttgctacgaatcgaacaactcccttgccattatcttcacatagctcccttattgccagtactgtccacaaaacaaaataatattaattgcctaaactgatagtgaagtaattttttaattcgtatgggaggcatgaagcctaccaaactcctctgaaaaggattgcaaacaactgaaacactgtataagggtgagatggatggatagaatgatgaatcttgagttttgctgaagtgattttataccataaaatttggggaaaaaagaactgctcttttgtacataatgggtatgtatttgttatagaaaatggtacaccaagaacttgaacagtgcaaacttgagagataaaattgatcctggtggctctaagtttaaactggagcctgacatgttcacctcatagtctaagttcaaacttctgtaatttcagtttcctttttgcattcattattcagaaaagttcaagagatttttttttctaatttttccattcaaatcatgcagaaagaagttgcacaattcacctgtcaatctgagcgccacattggaacacaatctgggggcatggatcaggtaaatagttcatagttttctaactgattatggtaatactcagttctttttgtactttaacttattattatgccacctgtcatgtaaatcaaagtacatctgtctaaaggaaaatgtcatttgttggggttagcttatggacgagatattactatgtttgtaatatggacatccaaatatactacttcgtaaattgtatcgcttattgttcatataatcctttgactatttgtgttcttctgaaactttttgttaatataatcatgcttacgtgcaaaaaaccatcgtggttccaagtattgattacaaaatcaactcatgacaggatgaccatcaataaattttgcagaactttttatatattattactgtgtgtacaagcaatgctatttatataatgaataacatattttagttggcctttttattttgaactaccctgttgtctgttaacatttcattatattttcccaggctatatctatcatggccaaacctggatttgctgagttgatagatttcaatccaatccatgccactgatgtgcaactacctccaggcggtacatttgtgattgcccattgcctggcagagtccaagaaagcagagacagctgcaacaaactataacaaccgtgttgttgaatgtcgcctggctgcagtaagtgatttatttcggactgaacatgtttaaacactagtttcagacatctttattttgcacatgtgtgacttggcagctgtaaattgactttaattttgaattgaaattttaagaatattcaaaggttcccagattcctttctgttgtgctgctgcacaatgcaagtgaccttaacatgtttattcagcttctagggcaattttaaaattttactttggaactggatttgagctggctgctatatcaccaacaaagtaatgatatttctttttcatttgttcatttaatattgctgttttgcatttttgcagattgttcttgccatcaaactagggatggaaacaaaaaaggctgtctcctctgttaccaccctctctgatgttgaggggttatgtgtctcttttgctggaaaagagggttcttctgatcctggagttgccgtgaaggtacaaaattttatcaggaacttagattatcctctcatgaaggatatacgtacgttccatctatttattcgagaaaagagatgatcggtacaagttaggcaagttatgtttcattattttgtactcatatgggacacttggttacaatatgttgtaattagcgtttgggtgtatataattttttttataaaagtaatgctggaaagttctttttgttctgtcttatcatgtactcatctgattgtgttattgtgtaattttgcagaaactattacatgaagaatcatatacaacagaagaaatagagaaaattacaggtcaaagcctgacatctatcttccagagctctcaaacttccttggatgttctaagagcagcaaagcatttcaagttatttcaggtgatttccctttgatgcagtcctactcagtagaacaactcttctgtggaaaatctgttttttaaagatattttgtcattctattatacatgtctctttgtttttgcgtggtacttttttttttgcattattttttgctgaagttcgctttagttttgtgtaactcaggaatatgtttgactgtgccctttgatgatatgccaattggttataagtttctaatgtgtgtttactttcagcgtgcctttcatgtgtactcggaagcaaggcgggtttatgccttcagagatactgtattgtcaaaactcaggtacgttcattaattgcagtcaccatgcatattctggttattttcttgtttgtttcttcccaactattctcttactacatttatcctcacagctgtcatggacgattagcagcccgtatacgaacatttatttctaaattgagagatctaactgttgctatcttttttctgcagtgcggaagatatgcttcaaaaactgggcgatcttatgaatgaaagtcactatagctgcagtgtgttatatgaatgcaggtaccatttttagtagtgtactttaactacgatgggtatcgttcctgagcagacacattgatacttaaaactcgtattgacacttcggatgtcatgaaaacagtcctctctttcagaaaaaaagttatagcatactgacatattccattgcccagctgtcccgagttggaagagcttgtaaaagtatgtagagacaacggagcactcggagcacgtcttactggagcagggtggggtggctgtgcagtcgctttggttaaggaaggcattgtcccgcagtttattctcaatttaaaggtaaattaaatctgtaagctcttgtctttatccaataagcaacatatatgcatgataatacatacataatccacgcagacaactatagtctacatatttcaagtgaaacagcagcacccaactctgtttattggaggtgatcctcactgacaagatatacattttattgcaggaaacgtactataaatcaaggatcgaccggggagtgatcaaccagaaggatcttgggttgtacgtgttcgcgtccaagccgtcgagtggagcagccatattcaagctgtaggccaccaatccaccattctttcgccacctgtaaatcgattcagaccagaagcgccacgacgcaagcacgcaggttcctacatgacctaagtccacccacacgtcaatgtatctttatacaagtacttattagaaacaataaatcatgtctattaatctattactatgccgggacacaaccaatagagacttcaaaacaatgatgcatcagtggttagtagggtgtcgatggaggttgcttttttttttttttcttatacagtgatacgatgatacttctagtacttgcagtggacctttggactttggtcaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0832600, RefSeq:Os03g0832600