Os03g0835100

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0835100| Description = Similar to Chloroplast protein import component Toc159| Version = NM_001058350.2 GI:297601944 GeneID:4334695| Length...")
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Gene Name

Os03g0835100

Description

Similar to Chloroplast protein import component Toc159

Version

NM_001058350.2 GI:297601944 GeneID:4334695

Length

3913 bp

Definition

Oryza sativa Japonica Group Os03g0835100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35936865..35940777

Sequence Coding Region

35936888..35939125

Expression

GEO Profiles:Os03g0835100

Genome Context

<gbrowseImage1> name=NC_008396:35936865..35940777 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35936865..35940777 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaggttttcccaattgaatcatctgtgcccctgcaagtccctcctactacggtcagtgttcctaggaaaaatgtggcttctagccctgtgttggaagtggctcctaaccctgataatgagatgactgaagaggagaggaagttgtacagaaaggtggacgtggcacgaatcaagtatttgcgtcttattcatagactggggtatgacactgaacatcatatagctatacaagtgttgtatcggcttagtcttgttgaaggattcaggcgcataaaggtggcaaatcattcctctgagcttgagagtgcctggaagaaggctttgcaacttgaagcagagggaacagaggacttggaattctcatgcaatgtattggtccttgggaagacaggtgtggggaagagtgcaacaataaactccatatttggggaggacaaatccaaaacgagtgcttttcttcctgcaacaactgcagtgaaggagatttctggggttgttggtggtgttaagtttcgtgttgtcgacaccccgggacttgggactactcacatggatgaaaaatcaaacaggaaagtgcttaactcagttaagaagtatatcaagagatgccctcctgatgttgttttatatgttgatcggattgatacccagcgtcaggatgcaaacaacttatccttactgcaatgtattaccagtgtgctaggctcgtcaatatggtccaaaaccattattactctcacccactcagcagcagctccacctgaagggcctagtggcatcccgttgaattatgagatgtttgtcactcagcggactcatgcaattcagcaaagtatccggcaggcaactaatgatcctcggtttgagaacacatcagctcttgtggagaatcatcacctctgtcggaggaacacagagggtgaaaaggtgcttcctaatggccttatttggaggcgcctgctcctcctcctgtgctactcagtgaagacagttgagactaacagcctgtcagcccgggttgcttctcccgcaaacctctttagcctgcgttttcggatgcctccacttcctcacttcttgtcatcattgttgcaatctagagagcacccaaggtgtgctgctgaccaagatgttggagatattgatcctgatgagttgataaatgaggatgaagaagatgactacgatcaacttccaccctttaagccattaagtaaatcacaggttgcgaaactctccaaggagcaacagaaattgtactttgatgagtatgactaccgaaccaagcttcttgagaagaaacagttgaaggaacagctccgaagactaaaggaaatgaagatagagggaaataaccatgatgtacttggggacaatgataatcctgatgatgaatatgagacagaaagatctgtcatgccagattgggccttgccatcttcgtttgactctgatgatccagcataccgttatcggtgccttgaccctaagccaaactttctggtgcgtgctattaccaaccctgatggatgggatcatgattgtgggtttgatggtgtgagccttcaatatagccttgatgctgccaatgcgtttccagcttctctgtgggtccaagttaacaaggacaagagagaatccaccattcatttggtgtcctcaatatcagctaagcatagggaaaatgtttcaagccttgcaggcttcgacatccaaaccataatggaccagcttgcttacactcttagaggggagagcaaattcaagaactccaagaaaaacacaactaccggaggtttgtccatgactttcttgggagatactatggtgaccggagcgaagtttgaagacaagctatcagtaggtgatagattaacattgttagcaaacactggtgctgtgtccattagaggtgatactgcatatggagtgaatatggaggcaactctgcgagagaaagactatctgatgggtcaagaccttgcaattttgggagcatccctggttagatggcataaagaatggagcatggctgcaaagttggattcccagttctctatgggaagagcttcaaacgtggctgttcatgttgatttgaccaacaaattaactggacgggtcagcataaaggctaatacatcagagcagttgaagattgccctattaggtgtctgttcaatgacaatgtatttatggaacaggatgcatccttttattgatcgtaattattaa</cdnaseq>

Protein Sequence

<aaseq>MAKVFPIESSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMT EEERKLYRKVDVARIKYLRLIHRLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSEL ESAWKKALQLEAEGTEDLEFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTA VKEISGVVGGVKFRVVDTPGLGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDT QRQDANNLSLLQCITSVLGSSIWSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHA IQQSIRQATNDPRFENTSALVENHHLCRRNTEGEKVLPNGLIWRRLLLLLCYSVKTVE TNSLSARVASPANLFSLRFRMPPLPHFLSSLLQSREHPRCAADQDVGDIDPDELINED EEDDYDQLPPFKPLSKSQVAKLSKEQQKLYFDEYDYRTKLLEKKQLKEQLRRLKEMKI EGNNHDVLGDNDNPDDEYETERSVMPDWALPSSFDSDDPAYRYRCLDPKPNFLVRAIT NPDGWDHDCGFDGVSLQYSLDAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVS SLAGFDIQTIMDQLAYTLRGESKFKNSKKNTTTGGLSMTFLGDTMVTGAKFEDKLSVG DRLTLLANTGAVSIRGDTAYGVNMEATLREKDYLMGQDLAILGASLVRWHKEWSMAAK LDSQFSMGRASNVAVHVDLTNKLTGRVSIKANTSEQLKIALLGVCSMTMYLWNRMHPF IDRNY</aaseq>

Gene Sequence

<dnaseqindica>24..2261#gagctgccacacctggacaaggcatggccaaggttttcccaattgaatcatctgtgcccctgcaagtccctcctactacggtcagtgttcctaggaaaaatgtggcttctagccctgtgttggaagtggctcctaaccctgataatgagatgactgaagaggagaggaagttgtacagaaaggtggacgtggcacgaatcaagtatttgcgtcttattcatagactggggtatgacactgaacatcatatagctatacaagtgttgtatcggcttagtcttgttgaaggattcaggcgcataaaggtggcaaatcattcctctgagcttgagagtgcctggaagaaggctttgcaacttgaagcagagggaacagaggacttggaattctcatgcaatgtattggtccttgggaagacaggtgtggggaagagtgcaacaataaactccatatttggggaggacaaatccaaaacgagtgcttttcttcctgcaacaactgcagtgaaggagatttctggggttgttggtggtgttaagtttcgtgttgtcgacaccccgggacttgggactactcacatggatgaaaaatcaaacaggaaagtgcttaactcagttaagaagtatatcaagagatgccctcctgatgttgttttatatgttgatcggattgatacccagcgtcaggatgcaaacaacttatccttactgcaatgtattaccagtgtgctaggctcgtcaatatggtccaaaaccattattactctcacccactcagcagcagctccacctgaagggcctagtggcatcccgttgaattatgagatgtttgtcactcagcggactcatgcaattcagcaaagtatccggcaggcaactaatgatcctcggtttgagaacacatcagctcttgtggagaatcatcacctctgtcggaggaacacagagggtgaaaaggtgcttcctaatggccttatttggaggcgcctgctcctcctcctgtgctactcagtgaagacagttgagactaacagcctgtcagcccgggttgcttctcccgcaaacctctttagcctgcgttttcggatgcctccacttcctcacttcttgtcatcattgttgcaatctagagagcacccaaggtgtgctgctgaccaagatgttggagatattgatcctgatgagttgataaatgaggatgaagaagatgactacgatcaacttccaccctttaagccattaagtaaatcacaggttgcgaaactctccaaggagcaacagaaattgtactttgatgagtatgactaccgaaccaagcttcttgagaagaaacagttgaaggaacagctccgaagactaaaggaaatgaagatagagggaaataaccatgatgtacttggggacaatgataatcctgatgatgaatatgagacagaaagatctgtcatgccagattgggccttgccatcttcgtttgactctgatgatccagcataccgttatcggtgccttgaccctaagccaaactttctggtgcgtgctattaccaaccctgatggatgggatcatgattgtgggtttgatggtgtgagccttcaatatagccttgatgctgccaatgcgtttccagcttctctgtgggtccaagttaacaaggacaagagagaatccaccattcatttggtgtcctcaatatcagctaagcatagggaaaatgtttcaagccttgcaggcttcgacatccaaaccataatggaccagcttgcttacactcttagaggggagagcaaattcaagaactccaagaaaaacacaactaccggaggtttgtccatgactttcttgggagatactatggtgaccggagcgaagtttgaagacaagctatcagtaggtgatagattaacattgttagcaaacactggtgctgtgtccattagaggtgatactgcatatggagtgaatatggaggcaactctgcgagagaaagactatctgatgggtcaagaccttgcaattttgggagcatccctggttagatggcataaagaatggagcatggctgcaaagttggattcccagttctctatgggaagagcttcaaacgtggctgttcatgttgatttgaccaacaaattaactggacgggtcagcataaaggctaatacatcagagcagttgaagattgccctattaggtgtctgttcaatgacaatgtatttatggaacaggatgcatccttttattgatcgtaattattaatagcactggttagtacaacaatttagaatttcttgaccattttatgcttttcttgccaattctgttgtgtttctgcttgttatttcaaacttccgttaaaattcctccagctctactgtcaactcatgttcgccttgtgttcttgtttattttgcacatgtataagtaaaaaaacaacataggagggctatgtttttttgttagagtactattgttgctgactagatttcctcctattcattactcatgtacactgtggcttttcattgtagaactgttttctacatgttctttcttttttaacaacaaagggactgtctatctgttatcctttgtattgtataattatccttggttccttccagccttccatatttaaatcattttgagaagaatttaggagctcatataatatactgtatatatattggaccattttttccagactggttggaaatagggattatgtgcataaaaatgtgatgggctaaattcaatttgtattggccaattgggctaaatggctttgagagaatgagggttacggggtcaaatgactaaaaaaggaacaaacttcagttgatggctacatttcaactaaattaacaaactctaattcccaagtgttttaaggtcaggttataaatctaattcccaagtgttttaaggtccagttataaattagtgttgtatgacaacccattagacaaaattcaaacagctatatgaatctactttcttctgctcaggttatttatatttcaaaactgaatttctcttggaaggtcatgtaaaggttctgtcctttcttggagtcctccattccaaggtaaaccatcatagtgcccaatctttttaagtcttttataattttagtagataaaagtcacttaagtgaaaatcagtgttttagctgataagttgctatatgggctagtaaaacttgtcagatgtgcaacgatcattagtctgtcggtaaagaagctgggaacttattgttggttacttaatggaaattgtgatggtgaactgtgttttacccaaatacttattagaagtagtgagtgaagctttgttatgtgaattttgctgatacatctagaaaatgatattgtgcccaagttcttatacatcattttcacccttaacttgtgattccataggtgcgttgggaagtgctcggaagcttcagagttcaggctcctactactcagctagggatataagttgaaccatcactttcagtcaagaatcaagacaagtgtagctgtgctgccatttgatgtttgcttccctccctccgatgtgcagttggtggacaactttaagagcagaagaagatctactcttgttttggagaaacttgtgatcagtagcagctgttaaaccataataccattgtaagttattaccatcttaccatctttttttttctctgtgttgcccctttcgatgaagcaactaaagttcgacaaatacaagaaatctagatgttgggtaaaacaagggccatcatattgtgctatgtcaatggttggtaaactttttgaactactatgcttatgccctttgtgctggacatctgataagcatgacacctgagaaattatagtttctgttagttgttgccttgtgttagacaatatatatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0835100, RefSeq:Os03g0835100