Os03g0835200

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0835200| Description = Retrotransposon gag protein family protein| Version = NM_001058351.1 GI:115456430 GeneID:4334696| Length = 1758 bp| ...")
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Gene Name

Os03g0835200

Description

Retrotransposon gag protein family protein

Version

NM_001058351.1 GI:115456430 GeneID:4334696

Length

1758 bp

Definition

Oryza sativa Japonica Group Os03g0835200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35947682..35949439

Sequence Coding Region

35948532..35949344

Expression

GEO Profiles:Os03g0835200

Genome Context

<gbrowseImage1> name=NC_008396:35947682..35949439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35947682..35949439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggttcctcgtcaagcactgcctccaccaatcctctctttggcgttcaagtttcagagaaactgaccaaaggaaactatgcgctctggtcggcgcaagtcctggccgcgatacgcggcgcccgtcttgatggccacatcaccggcgccaccgccgctccatccatggagatcgagaagacggcgagcgacaagacgacggagaagatcgtcaaccccgcctaccaggagtggtttgcctcggaccaacaggtcctaggcttccttctctccacgctgtcaagagacattctcacccaagtggcgacggcatccacggcggcgcaggcatggcagcaggtgtgcgccatgttcactgcacaaaccaaagcccggtcgctcaacgtccggcttactctcaccaatacccagaaaggtaacatgagtatatctgagtattgtggcaagatgaaagcactagcagatgaaatcgctagttcagggaaaccccttgatgaggaagatttagtcgcttatgttctgaatgggctagatgatgattttgaacctgttgtatctgctattgtggcacgcaatgagtcgaccacaatggcggaagtgtactctcagcttcttaactttgagaacaggcaagctcttcggcaagctcatgcttcggcgaacgcggccgtggtggttttcagcgtggtcgcagcggcggccgtggcacacgtgggcgcagcaatcctgctgctccaggacgtgggcgcggcactggaggaaatcagactcggggtggtaatgaccgccccatctgccaagtgtgcctga</cdnaseq>

Protein Sequence

<aaseq>MAGSSSSTASTNPLFGVQVSEKLTKGNYALWSAQVLAAIRGARL DGHITGATAAPSMEIEKTASDKTTEKIVNPAYQEWFASDQQVLGFLLSTLSRDILTQV ATASTAAQAWQQVCAMFTAQTKARSLNVRLTLTNTQKGNMSISEYCGKMKALADEIAS SGKPLDEEDLVAYVLNGLDDDFEPVVSAIVARNESTTMAEVYSQLLNFENRQALRQAH ASANAAVVVFSVVAAAAVAHVGAAILLLQDVGAALEEIRLGVVMTAPSAKCA</aaseq>

Gene Sequence

<dnaseqindica>96..908#atatagtgaatcaacacgaaaccctgcgtccaccgtgacgctttcctgcatacacctgagttttatatggtatcagagcctcaaagtccggcgtgatggcaggttcctcgtcaagcactgcctccaccaatcctctctttggcgttcaagtttcagagaaactgaccaaaggaaactatgcgctctggtcggcgcaagtcctggccgcgatacgcggcgcccgtcttgatggccacatcaccggcgccaccgccgctccatccatggagatcgagaagacggcgagcgacaagacgacggagaagatcgtcaaccccgcctaccaggagtggtttgcctcggaccaacaggtcctaggcttccttctctccacgctgtcaagagacattctcacccaagtggcgacggcatccacggcggcgcaggcatggcagcaggtgtgcgccatgttcactgcacaaaccaaagcccggtcgctcaacgtccggcttactctcaccaatacccagaaaggtaacatgagtatatctgagtattgtggcaagatgaaagcactagcagatgaaatcgctagttcagggaaaccccttgatgaggaagatttagtcgcttatgttctgaatgggctagatgatgattttgaacctgttgtatctgctattgtggcacgcaatgagtcgaccacaatggcggaagtgtactctcagcttcttaactttgagaacaggcaagctcttcggcaagctcatgcttcggcgaacgcggccgtggtggttttcagcgtggtcgcagcggcggccgtggcacacgtgggcgcagcaatcctgctgctccaggacgtgggcgcggcactggaggaaatcagactcggggtggtaatgaccgccccatctgccaagtgtgcctgaagagggggcacgtcgctgcagagtgttggcataggtacgatgagacctatgtccctgatgaaaggagtgcggctgcagcagctgcatatggcatcgacaccaattggtacctcgacacaggggcaaccgaccacatcaccaacgaactcgacaagttagatgttcgggagaagtacaagggaggagacaagattcacaccgcaagcggtgcaggtatggaaattaagcacattggtgattctgtcattcatacccctactcgtgaattacatctcaaaaatattttacatgttcctcaagcgaaaaagaaccttatctctgctcatcgtttagctatggataattttgctttccttgaggttcattccaattattttttgataaaggatcgagccacgaggaacacgattcttaaggggagatgccgccgtcgcctctactcccttcctacatcacctgccaagcaagtccatgccgccacaactccttccttctcccgatggcatagtcgtttgggacacccagccgtgcccatagtcactagagttcttagcaagaataatttaccttgttctaccgtagcaaataaagactcaatttgtgatgcctgtcaaaagggcaagagtcatcagcttccctatcctaagtcttcaagtgtgtcaagtcaacctctagaacttattttttctaatgtctggggccctgctcctatttctgttggtggaaagaagttttatgtcagttttattgatgattatagtaaatttacttgggtttaccttcttaagcataagtcggaagtattccaaaagtttcaggagtttcaaactcttgttgagagattttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0835200, RefSeq:Os03g0835200