Os03g0835800

From RiceWiki
Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0835800| Description = Galactose oxidase, central domain containing protein| Version = NM_001058355.1 GI:115456438 GeneID:4334700| Length =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0835800

Description

Galactose oxidase, central domain containing protein

Version

NM_001058355.1 GI:115456438 GeneID:4334700

Length

5969 bp

Definition

Oryza sativa Japonica Group Os03g0835800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35966068..35972036

Sequence Coding Region

35966183..35966268,35966352..35966449,35966576..35966714,35966809..35966837,35966953..35967049
,35967140..35967195,35967306..35967413,35967535..35967591,35968091..35968182
,35968821..35968905,35969840..35969992,35970132..35970226,35970369..35970545
,35970633..35970791

Expression

GEO Profiles:Os03g0835800

Genome Context

<gbrowseImage1> name=NC_008396:35966068..35972036 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35966068..35972036 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccgcagctgcagccgaagcagatgcactgggcgagggccgactcctccgacttcggaggccaaatccccgcccctcggagcgggcacacggcggtgagcatcggcaagtccaaggtggtcgtcttcggcggattcgccgacaagcgcttcctctccgacatcgccgtctacgacgttgagaataggatttggtacacacctgaatgcaatgggagtggctcggatggacaggcaggccccagtccaagggcctttcacgtagctatcgtcattgactgcaacatgttcatctttggcggccgatcaggcggcaagagattaggtgacttttggatgctcgatactgacatatggcaatggtcagagttaaccggctttggtgatctaccatcacctcgagagtttgctgctgcttcagccataggaaacagaaaaattgttatgtatggcggttgggatggcaaaaaatggttgtcggatgtatacatcatggacacaatgtcacttgagtggacagaattatcagttactggatcagtgccacctccaagatgcggacattctgccacaatgatcgagaagaggttgcttgtatttggtggcaggggtggagctgggcccataatgggtgatttatgggctttaaagggtgtcactgaagaagataacgagacaccaggttggacacaattgaagctcccaggacaatctccatctccacgatgtggtcactcagtaacatctggtggaccttatctcttgctgtttggaggacatggaactggtggttggctaagtaggtatgatgtgtactacaatgaatgtattattttagacagggtctctgttcaatggaagctcttagcaacaagtaatgagccaccccctcctcgagcatatcattctatgacttgcatagggtctcgatttcttttatttggtggctttgatgggaaaaatacattcggggatctatggtggcttgttcctgaaggtgatcctattgcgaaacgagacttggttcctaatgttgattcagacagcaaacctagtaatgtgactggtggtgctcaacattccgcatcacaggaatcacaagctggggaatctccaatgattgacttggcaaaacgattgggcatttcactttctttagaagcttcagcaagttttgttgacgagatcaatgataaagaactaattgaattatcatctatgctttttggtgaatcaccccctaccggtgaccagcatgcatgcattcaggcacttcgtgatcattggacaagtattccagccaactcaatacagctccaggagctaggccctttactgagggattatcaacgcctcattcttcgccgctatttgtacggttcccattcttgcgttttccctctactgtctttatttacactttcttaa</cdnaseq>

Protein Sequence

<aaseq>MTPQLQPKQMHWARADSSDFGGQIPAPRSGHTAVSIGKSKVVVF GGFADKRFLSDIAVYDVENRIWYTPECNGSGSDGQAGPSPRAFHVAIVIDCNMFIFGG RSGGKRLGDFWMLDTDIWQWSELTGFGDLPSPREFAAASAIGNRKIVMYGGWDGKKWL SDVYIMDTMSLEWTELSVTGSVPPPRCGHSATMIEKRLLVFGGRGGAGPIMGDLWALK GVTEEDNETPGWTQLKLPGQSPSPRCGHSVTSGGPYLLLFGGHGTGGWLSRYDVYYNE CIILDRVSVQWKLLATSNEPPPPRAYHSMTCIGSRFLLFGGFDGKNTFGDLWWLVPEG DPIAKRDLVPNVDSDSKPSNVTGGAQHSASQESQAGESPMIDLAKRLGISLSLEASAS FVDEINDKELIELSSMLFGESPPTGDQHACIQALRDHWTSIPANSIQLQELGPLLRDY QRLILRRYLYGSHSCVFPLLSLFTLS</aaseq>

Gene Sequence

<dnaseqindica>116..201#285..382#509..647#742..770#886..982#1073..1128#1239..1346#1468..1524#2024..2115#2754..2838#3773..3925#4065..4159#4302..4478#4566..4724#gaggtatccccaaatttccttccgccgccgtgctgctggtcaccgccgtggcgaggcgaggcgatcaagagctgagctaccgtggaggcgtggattgagagtctgagagagagcaatgacgccgcagctgcagccgaagcagatgcactgggcgagggccgactcctccgacttcggaggccaaatccccgcccctcggaggtaatcctctcgatccaatccacctcaaatccccgccgccgctgccgccacctgaaaccatgtgaattttcgtgcctctgcagcgggcacacggcggtgagcatcggcaagtccaaggtggtcgtcttcggcggattcgccgacaagcgcttcctctccgacatcgccgtctacgacgttggtaataagccccaccgcttgcttcgcctgattgcaagtgccacgattcagacgattgattctgtttagataagagcgctgaaccttattagctgtgtgaacttccggatgcaactcgtgtttgcagagaataggatttggtacacacctgaatgcaatgggagtggctcggatggacaggcaggccccagtccaagggcctttcacgtagctatcgtcattgactgcaacatgttcatctttggcggccgatcaggcggcaagaggtctgcgattcatacggctatttgctgggatttgaaaagcaccctataaagaattgccttatttgttgtttataacatgatgttcattgcgcagattaggtgacttttggatgctcgatactggtaaacttctatactttctcaagcattttaagaccccttccttaatttgtttgggcgtatagtggaggttcccgtgattactaataaccgtcatgttgcctctttcatattccagacatatggcaatggtcagagttaaccggctttggtgatctaccatcacctcgagagtttgctgctgcttcagccataggaaacagaaaaattgttatgtaagcattccatctaatgcaagtttccctttcatttctgggtaccatcgcttatgagttatgaagaacatttggttcatcctgattcaggtatggcggttgggatggcaaaaaatggttgtcggatgtatacatcatggacacaagtaagttaacttcctgttcttattcaatcagggttgagtatttaatttattttgttcaggatggcaataaaaaaatcaatcaattaataactacactctctattggacagtgtcacttgagtggacagaattatcagttactggatcagtgccacctccaagatgcggacattctgccacaatgatcgagaagaggttgcttgtatttggtggcaggggtaacttacatttcttgacttgacttgtatttgctgatgatttttaattattaatgaatcaatgcataacttttggccatcaacatatatttctgattatttcatatatttttttcaataggtggagctgggcccataatgggtgatttatgggctttaaagggtgtcactgaagaaggtacatcttcctagttgcttgtaaatctacttatattgagagggaaggagggtgggatactaactgctatttaaaactggaaaactcaactatttgcctgggagggagggggagaagaagaggagtggccgaatggggaggtctcaggccatcctaactgctatttacaacatctgacacacaatagttggtggtttaaccatttgcctctcaatagaagcttactgtagttgataatatgccacttaatagatgtgcacactccatgtattgcccactttgaccaaatatttttgcatgtttctcctgttgcaatggtgagcccacatttatttttgttttaataaacttgcctttcttagttgatgttagctattgttaattggaaatgaaaaacctggttattgccgactactgagtgtgcttacattcttattccttcaatgagattacacaattttttgattgccagcacctgatgtttattttattttggaagataacgagacaccaggttggacacaattgaagctcccaggacaatctccatctccacgatgtggtcactcagtaacatctggtggaccttatgtatgcaatttggtgtccttatatttgctttcataccatttctctttctagttgcttcgtatttaattgctgatatctcaattgagtattacgtactgcaagttctctcagttgatcgttctgttatactagaataggtatcagaaactattgcccaggagtagaaatggaatgctggttcacatttaatacttgttgacacagtacaaacagcaaactagggatgctcagtgttttgccatcacactattcaatgttgatgttaagttttctgctacaatgaatataatggtttttcagtatatgacatactgtagttggtcataccaaaatttttattttttcaaagcccgcctgtcttattctttacttggagactccacaaagtaatgcttttgttcataccaggtagctttgcaaatttacgctatccatcagttctatagtcacaaagtaattcttttgttctttactgggtagctttagcaaacttacgctatccatcagttctagagcttatgtaattggaagatgggtttcttctcctggaactatccatcagttctagacattttgttgtccaaacttttaattcattgcgcaatagcattactaacaaccatatatcttttggttagctcttgctgtttggaggacatggaactggtggttggctaagtaggtatgatgtgtactacaatgaatgtattattttagacaggggtaagcaccagcaaattttctgatttttttttcatgttgttgtgagcatgcattgggatcattgatatggaattagcattacatttttcttgatgtcaacacatgcacttattttgactgtcttgttgacacccatcagttacatgggcaaaatcccttatatcatgggacgggggtagtagatggttttcataatcacaaaagagtgcaatcagtgcatgctggtaactaaaaaataagatgtgattccacagtgatacaaaatctacttctcatactaagacagagtagctttgacaaaacattctttgcaatataactgcaaacaaatcccaacattgatcaagaaaactggaaaagtaagcgggttaatatggtactcttgatcgttactacccgaacaagcattagggaagacagctagcaggtggttggggtatcgagttatcctactactaccatggtactcaaccacatgcttcatagccagcttgggacttgacacccataagagtaattctgtaacctcaacaacttacagcagcaattattatagatacactaacagaaagcatatgtgctctcctccttaagtcatggctaccttacatgtcctgcactctttgaggcattcagcgcacacatcatatgtctgctctgcaccgctgtgtgaaattgtgatcacatgcatccacttccctgatcttcatgttctagagtccagacaatcccaaatatcatgtcttacagagcattctgttgcttatgaccagcggatagaacttatatctgttaggttgttagcataccacttggccatctaatttagttttgtacttttcttccatttttttcttctcttgtagcaaccagcagtacttatagtttttcatcatcaccaactatatttgctgactaaaatttggcatctcagtctctgttcaatggaagctcttagcaacaagtaatgagccaccccctcctcgagcatatcattctatgacttgcatagggtctcgatttcttttatttggtggctttgatgggaaaaatacattcggggatctatggtggcttgttcctgaaggtatggtcactgttcaactgaagaagattctttattgatataatggagtgcagtttttattcttacagctttactccataatgcttgatgggaaaatatttttcttctttctgaaaactctacctgatcgaatgctcaggtgatcctattgcgaaacgagacttggttcctaatgttgattcagacagcaaacctagtaatgtgactggtggtgctcaacattccgcatcacaggtatgtatttttgcgtgcttgtgtgagtaacgattgacctgtggttcagaaggtttcctggagagtaaaagtgagaaaccaatctggaaacttgagatgatgataaaaaaggtatagttactaaaagatgcacttatcgcaggaatcacaagctggggaatctccaatgattgacttggcaaaacgattgggcatttcactttctttagaagcttcagcaagttttgttgacgagatcaatgataaagaactaattgaattatcatctatgctttttggtgaatcaccccctaccggtgaccagcatgcatgcattcaggtgctcatgtctcagctattctgtaaccagatccagtcgcattggtctatgaagaaatgtgatgttttttttttgtgcatggtacaggcacttcgtgatcattggacaagtattccagccaactcaatacagctccaggagctaggccctttactgagggattatcaacgcctcattcttcgccgctatttgtacggttcccattcttgcgttttccctctactgtctttatttacactttcttaaccatctgcgtttatgtacatcatccctcttccagaaaatgaattattatgttttgtcatggtgataaatccgagatgctagcataatttgttttgttttgcacaagtaatagtcacaagctgtacatttgtaccctttattgccaatctgttatgctcagcggtaacacatgagcatgcatagtaacctgatggccattatcaggcttagagtttttacaactcacaaaatgacaacggttctctttctattcatcaaatcaagtcctgaatttaagtgaagagtatttgttagaaaaatttttaattgattatgattttactagtacttccttcttgcaacggttacagggaaaattcattcacgtctttctatgagaaggaagttcaccgcttcttccatttgaaaaatgcttccgaggtatgtatagtgcatatatgatcatctcctatcagttaatgcatagttgcataaggaactttctgccattttctccttaacactgccttgtatctctggtgtacttcagttacggatggatgacatccccatcttgttgatggagtatggaaagctgctttccacctgaggctgggatagcatcttagttctgactctttacttggtaagcgtccctgaactcaaccactgtgttggacacaatttttttttctactgctagttttctgtaactatgttatgcatcaccttcatccatgtgccttgtagaaggctagacactgctcacatccgctgacgagtacttctatgtcatcagagaacattagaaggcaaggaagcatagctgcatacatggcatgctttcacgatcttcagagcttggtggcatcagagctttgctccctgctcaaaaacgttttcagcatgggcacgaacaaagttaccgcactttcgggtacaacgtcgatagaatttgtgaatcatgggcgtgttaagaacctacatgctgcattatcttaaagaaatcgaaagcgacaacacctggcggcttggtgccgagaagctggcaggaaggctcttcacatttgttcaccttgattgatgtagtattctttctttgctcactaacaaaaataattatacattcattagtggagtcaattctcatattgattctttttctttgattgatatggagtcgtggccatctcggcgacggcacatttgacatgcatgatgcatgcgttgtactggtgctgtactcgctccatcaaaaaaaaaaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0835800, RefSeq:Os03g0835800