Os03g0836800

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0836800| Description = Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)| Version = NM_001058362.1 GI:115456452 GeneID:4334707| Length = 1...")
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Gene Name

Os03g0836800

Description

Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)

Version

NM_001058362.1 GI:115456452 GeneID:4334707

Length

1868 bp

Definition

Oryza sativa Japonica Group Os03g0836800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36012039..36013906

Sequence Coding Region

36012133..36012345,36012793..36012921,36013321..36013716

Expression

GEO Profiles:Os03g0836800

Genome Context

<gbrowseImage1> name=NC_008396:36012039..36013906 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36012039..36013906 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgtcgatgcgggtttgccggcgggcgtagtcgcgtccaggccggggccgttcctcgccggctcggctcgcttcacggcgaccatcaacggtaaaggcggccacgcggcggcgccccaccacgccgtcgatccgatcgtggctgtctcttccgccgtcctcagcctccagcagattgttgctcgcgagaccgatcccctccaaggcgcggtggtgtctgtgaccaccatcaaaggaggtgaagctttcaatgtcattccggaatctgtcactctgggcggcaccttgaggagcatgacaaccgatggcatgtcttacctcatgaagagaatcagagaggtgatagaggggcaagcagccgtgaaccggtgcacggcggcggtggacttcatggaggataagctcccgccatacccagcgacggtgaacgacgaggagatgtacgcgcacgccaaggcggtggcggagagcatgctcggggaggccaacgtgaagctgtccccacagggcatgggggcggaggatttcgggttctacgcgcagaggatcccggccgccttcttcggcataggggtcggcaacgatggcggcgggatggcggagacgacgacgaagaatcagctgcactcgccgcactttgtcgtcgacgaggaagcgctccccgtcggagccgccttccacgccgccgtcgccatcgagtacctcaacaagaacgcctctggcccttcagcctga</cdnaseq>

Protein Sequence

<aaseq>MHVDAGLPAGVVASRPGPFLAGSARFTATINGKGGHAAAPHHAV DPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPESVTLGGTLRSMTT DGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYAHAKAVAESML GEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMAETTTKNQLHSPHFVVDE EALPVGAAFHAAVAIEYLNKNASGPSA</aaseq>

Gene Sequence

<dnaseqindica>95..307#755..883#1283..1678#gaagctcgtgttccagccggcggaggaggggtacgccggcgggtactatgtgctcgaggaaggcgctgtggacgatgtgcagggcatcttcggcatgcacgtcgatgcgggtttgccggcgggcgtagtcgcgtccaggccggggccgttcctcgccggctcggctcgcttcacggcgaccatcaacggtaaaggcggccacgcggcggcgccccaccacgccgtcgatccgatcgtggctgtctcttccgccgtcctcagcctccagcagattgttgctcgcgagaccgatcccctccaaggcgcggtacgtatgtacggtacattaattaactcgctcttactactttttactccattcgtcctaaaatataagggaccataacccttctcatgtatatgatttcttcatttcaataaaagttcaggctggtgtctaacactcgccgtagttttcctaaaaaaaatataagagacccaaaaacccttatattttacaaggaaggaaatattattataatcctctcctatgtttcaaaatagatactactttaggattaaaaaattatcaaaaagtgatcatgcatataatgcaataatgaatgataaacaattatactacctccgtcccaaaatgtaataacttttggctataaatctggacacacagttatacagatttataactaaaaatacttatatttttttgacagatgagtaacaaacagtgataattgatgggccatgcatgcaggtggtgtctgtgaccaccatcaaaggaggtgaagctttcaatgtcattccggaatctgtcactctgggcggcaccttgaggagcatgacaaccgatggcatgtcttacctcatgaagagaatcagagaggtactaccttcgtcctaaaataaatgtagccgtgggaatccgtgtccaacgtttgaccgttcgtcttatttgaaaaatttatgagaaaattaaaaaaagttagtcacacataaaatactattcatgttttatcatctaataacaataaaaatattaatcgtaaaaaaattttcaaataagacgaacggtcaaacgttagacatgaacagtgcaaaacggagggagtagtaaaattatgctgataaatgagccagtatatatctagtactagtacatgcatataatataggagtttttttttttagaaattttataatataggagtatccttgtattttttttttcttcttggggaaaacatattttttttgttgaacttacatactggaatatatgaaggtgatagaggggcaagcagccgtgaaccggtgcacggcggcggtggacttcatggaggataagctcccgccatacccagcgacggtgaacgacgaggagatgtacgcgcacgccaaggcggtggcggagagcatgctcggggaggccaacgtgaagctgtccccacagggcatgggggcggaggatttcgggttctacgcgcagaggatcccggccgccttcttcggcataggggtcggcaacgatggcggcgggatggcggagacgacgacgaagaatcagctgcactcgccgcactttgtcgtcgacgaggaagcgctccccgtcggagccgccttccacgccgccgtcgccatcgagtacctcaacaagaacgcctctggcccttcagcctgatgcgtcccgtcaaggagcttaaatcgcctatgcatggcttggtaatggggttatctaagactataataatatccaaaaataatggtcctactagctactagctgcccaagaacaggccgttacaaaaacgtgtaaaaactattccagttggtcagcacaagcagtgataataaattcccggattgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0836800, RefSeq:Os03g0836800