Os03g0837000

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0837000| Description = Dcp1-like decapping family protein| Version = NM_001058364.1 GI:115456456 GeneID:4334709| Length = 5478 bp| Definit...")
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Gene Name

Os03g0837000

Description

Dcp1-like decapping family protein

Version

NM_001058364.1 GI:115456456 GeneID:4334709

Length

5478 bp

Definition

Oryza sativa Japonica Group Os03g0837000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36019334..36024811

Sequence Coding Region

36019700..36019756,36020042..36020803,36020931..36021054,36021658..36021714,36022769..36022913
,36023407..36023456,36024502..36024644

Expression

GEO Profiles:Os03g0837000

Genome Context

<gbrowseImage1> name=NC_008396:36019334..36024811 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36019334..36024811 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcccgacctggcgagcgaccaggagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgacatcctcatcatcgccgcgcacgtcgtcctctacagcttcgacgacaacatccaccaatgggaacacccaacccagattccagtttattgtcatgaatcgtaaaaatacagaaaatctgaccgaagatctcttggggggttttgaatatcaagtacaagtcccttacatcatgtaccacaatgctgcagacgaaatcacaggaatttggttctatgatcctcaggaatgtgaacaagttggatatcttttcagtaggatacagaaggcattttccagggtgtccccaaaggccaaggtttctgtaactgaaagtgagtatgaaaagccggaagtagtgcctgctgttccttcgaatgaggatactctaaaacagccaacgtcatctatcatgttgctggataatgcgaagtatgatttcttgtcggctttgctaaagggtgctgcatgtgttggtgctaccatggacgaagcaagtgcagtacagtcaaacaaatctgttgggatggttcattcatctactcatgcgtcacctcatgctattccaccacaatctcctgcaatacagtcaaataaatctttcgggatggttcattcatctactcaggcacctcttgctattccaccacaatctcctgcaatacggtcaaacaaatctgttgggatgattcattcatctactcatgcatcaccttttgatatcccaccacaatctcctgcagtacagtcaaataaatctgttgggatgattcattcacttactcatgcatcgcatcttgctattccaccacaatctcctgctttgcatggtctgcatccttctcaaatttcagcagttcctgtgatgccccatgatgctcatagatctagtagcacttctaccatccagcctacaagtctagcaaatccgttgttctttcctccgatgccatctttgcagacagcttctcatgctgcttcgtcattgtgttctgctgctcctcttcatcctcccattaccgttcagcagcttcaaagtgctcccttgcaccagcccttctccctaccgactgcatcgtccattcaaccaccatatggcatgccattactgcagccatttccaccgcccaacccttccccatttcttacctcgggagtgtcttatggccgcccagtgatcacaagagaccaactgaaggatgtgctactgagtctttgtcagaatgatgaattcatcgatatgatatatcgggagttcgtgaagagacagttaccttga</cdnaseq>

Protein Sequence

<aaseq>GPTWRATRRARGRSTSRCCVASTPPSPTSSSSPRTSSSTASTTT STNGNTQPRFQFIVMNRKNTENLTEDLLGGFEYQVQVPYIMYHNAADEITGIWFYDPQ ECEQVGYLFSRIQKAFSRVSPKAKVSVTESEYEKPEVVPAVPSNEDTLKQPTSSIMLL DNAKYDFLSALLKGAACVGATMDEASAVQSNKSVGMVHSSTHASPHAIPPQSPAIQSN KSFGMVHSSTQAPLAIPPQSPAIRSNKSVGMIHSSTHASPFDIPPQSPAVQSNKSVGM IHSLTHASHLAIPPQSPALHGLHPSQISAVPVMPHDAHRSSSTSTIQPTSLANPLFFP PMPSLQTASHAASSLCSAAPLHPPITVQQLQSAPLHQPFSLPTASSIQPPYGMPLLQP FPPPNPSPFLTSGVSYGRPVITRDQLKDVLLSLCQNDEFIDMIYREFVKRQLP</aaseq>

Gene Sequence

<dnaseqindica>5056..5112#4009..4770#3758..3881#3098..3154#1899..2043#1356..1405#168..310#gtgatcaaaacctcccctcctggctccataatccagcacggaaagaaggaaaaaaaaatcccgcgccgcgcggccgctagggtttccggcgaggaggtcgaggggggcgggcgcggccatggcgcgcggcgggagcggaggcgggaggtggaggagactgaatgtgaggcccgacctggcgagcgaccaggagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgacatcctcatcatcgccgcgcacgtcgtcctctacagcttcgacgacaacatccaccaatgggtataactctggtgctaaccctacgttccccccgcgccaaagccccgactctgattcgtttttgtggctctcggcgcacgcgcgcgcgttttctgcagagccggaggcctgtggaggggtcgctcttcgtcgtcaagaggtttcgcgctcaccctagctggtggatttggttctagctgattatggtctgttgctgttgtggattagcgtggttgggattttttttttctgcggacacgctttgcatgattcccatgaactagttgctcactgccgatctgatcaataatgccgatgtttttggaatttctgaaaagggcatcgtaatgaacttctggaaaataacggcatcatggttcggttcttatattgtgttttgttgtgtgattcagcaatttcctgcataacaaagagtattagaatctgattgccaggggtagtgtgaactgtcgttacttattgttgtttctgatacacgtgccattcctaaagaattgaatcaagtaactataagatgggacattgcattgttaaatgttgatgtgcatattgatgtggcatttgcagtaccattcactgagttttgggggtaggttttattttggtgtttatattcacaagctgattagtattggtggttttagatgcttttacgaatttctagtcgatctgaatagtacatgcctacattggatcatttctttctgctgattacctgtagatacagtgatgcatgtttctgaatcagagggagtgcctattcataacatacagctaatatagaatactttggaattggacagcaggttcaggaaaacatttttcttataaatatcaatattcaacacagaaggatccaatttttatgcaagtatcgtgctgacaatttttgtcacccactactattgacactctatgtttaataagtaatacttaaggccagaagtcccttaacttttgggtctgtgaaccctgacgtgtttgcatctgctggttgtctaaaattgctcattgcttttttaacaccaaaattttcttctttcaggaacacccaacccagattccagtttattgtcatgaatcgtaaaaatacaggtaatatatctacatcggcatgctccggcagtatcatctgatataaccttaagtcccgaacctaaggcatcctaaaatcgaagctatctgttctttgaatcactgtctactctaattacaatgtaaaatgatgaaactaatgcttcctgttcatttctgttatgccatatcagtgtgtaatcaaatgtttttgcttgtagtcccttggacgactaaactatgtattgttttgaagcacatatccatgatagaaaacacttgtatggacttgaataaattgttaaaaattggtgcatcctgtaaggccgtaacatcagtacaaagctagctcactcactttcatcttacggaatcatgcttttggtctcaaaacactaacttccatatcctagttaagtgattttgtggtttccgatttctgcttactttgtatgctagtatggagattgattatgtagattatgctgtcctccccatttcctcctatgaacagaaaatctgaccgaagatctcttggggggttttgaatatcaagtacaagtcccttacatcatgtaccacaatgctgcagacgaaatcacaggaatttggttctatgatcctcaggaatgtgaacaagttggatatcttttcagtaggtaatcattttctctttcatatgtcactaaatttcatcaatagcattgttttgatctgtggagatcattagtaggcttgtttcagatgtcttgcttctcagggtaggcgttttttcaacataaacaagagaactgattttatattggtctatttggcattccatgtttgataaggtatctgcctgtcgaaaactggagttactgaactaatatattgcaattatcaatacactgatatgacccgctaaattacaattatgtgcacactgatatggcccttctctattatcattcactgtaaagcccactaaagcctagtgtagcaatgtggtttttaggagacgtgttgaggttttcagtgctctgtgagtcatggtatctttcaggaaagcaatgctgccaaaccatcaagttgtaagcctgctgggctgcatgatacttcccgtgtatctggcatccataagaactgtgttgttttctctgatcatgcaatggcctgctgttctatccaccctattactgcaccactttaggcctttagtacatgctatcttgtgcagtttccgtatataatgttattcagtttttcaagttttaactctccaattctctgtaagcatgcatctcagtactactggaggtctgctccgaaagaatttctcttaggagttgtctcacttgtcacatcacaactaaatttggtgccttggtgccaaatatgtaaaacatgatttctaatataacaaaatgtgtagcaagataaaccactaccggctcatactttcagctgtctttgtttttggctttgaagtttgaacaagctgttttgttatttaaaattgtggctgtagtaagtcacacagtagtttagtcaatattcataatatttctatataaaatcttactctactgactgactggtagtttgttgcttgcgtccactggcttggcaatacaaaacattatgaagggcaaggcatcatttttttgtaactcttctgtgtgttctccccccatgcctgctgaactatacacctcatttgcaatggtacaggatacagaaggcattttccagggtgtccccaaaggccaaggtttctgtaactgaaaggtatttgaaactgtcatgcattttctttcctgttcacctttgcaagtggatgtaacttgtaccaattgcttagacatgaggtgataatgaattattgttatttgcttcagacattatattatttgttatttagaaatcacttccttattaagattaaatatctatttcgtatatggtcattgctcacagatcaatgttgtacgtacctattatagttgttttctcatctaatgtaattctaacctgaacaaaattcattcctaaaagaaaaaaaaatcgttgaagagtgttatttaccaatatcctagttgaaaagagttttttcctagtttgcaatatgagggcctttttagatcacaagcttaaaaattgcaggaataaaattttgagcaggtgatgctccatgtgaactgctactggatgattcaaaggaaaaatgagttagttcagtaaattgtagggaacaagaaggaaatgcagattcactgtggtatctagttgggtcgaattgatcccttcgattcagaacaatgttacccaaaatcaatgaggaactgaggctgtcaattatagtgaaattctcttttgttttgctcctttcagtgagtatgaaaagccggaagtagtgcctgctgttccttcgaatgaggatactctaaaacagccaacgtcatctatcatgttgctggataatgcgaagtatgatttcttgtcggctttgctaaaggtgaggaaaattgacatctcttattgaccttgttcgtatttatctgatgcttagcaatctaggatcattttgcaattttcctgagaaaatagattttatgtgtgaatattgaaaactctttgatcagggtgctgcatgtgttggtgctaccatggacgaagcaagtgcagtacagtcaaacaaatctgttgggatggttcattcatctactcatgcgtcacctcatgctattccaccacaatctcctgcaatacagtcaaataaatctttcgggatggttcattcatctactcaggcacctcttgctattccaccacaatctcctgcaatacggtcaaacaaatctgttgggatgattcattcatctactcatgcatcaccttttgatatcccaccacaatctcctgcagtacagtcaaataaatctgttgggatgattcattcacttactcatgcatcgcatcttgctattccaccacaatctcctgctttgcatggtctgcatccttctcaaatttcagcagttcctgtgatgccccatgatgctcatagatctagtagcacttctaccatccagcctacaagtctagcaaatccgttgttctttcctccgatgccatctttgcagacagcttctcatgctgcttcgtcattgtgttctgctgctcctcttcatcctcccattaccgttcagcagcttcaaagtgctcccttgcaccagcccttctccctaccgactgcatcgtccattcaaccaccatatggcatgccattactgcagccatttccaccgcccaacccttccccatttcttacctcgggagtgtcttatggccgcccagtgatcacaagagaccaactgaaggatgtgctactgagtctttgtcaggtatgttcttgaatccttttgtttatttagccgtgtaaattggcgccgattttcgctcaacctttactgggtccacatgattctggtgtgctttatcctctaaatgattttatggtgtcaagtgtcaaccatagttttttgcttgcatagttttgcgttagacttctctaacatggtttgtttttccaatgcatttcctcaaaaacgcttatgtatccaaaattttgctcacactccattcttaactaagaaattttactcacgggtgaaatttgcttctggcagaatgatgaattcatcgatatgatatatcgggagttcgtgaagagacagttaccttgaggagactgtcactaccacaggctttagtttgtgtaattgtgttttaggtaggccatttttttcaaagcctgtagactaacgtacgtgcatttgacataccaaaggttagcatagtttaggtccaactatcgactagttttgagcagtattctcggagcagaaaaagtcttgctccaaataccagaaaggcagaaaccttgcatttcgcctaataccaactggaatagtttttgcacgtttttgtaacggcctgtttttgggcagctagtaccattatttttggatattactccccccgtttcacaatgtaagactttctagcattgtccatatatatatatatagatgttatatatgtttagattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0837000, RefSeq:Os03g0837000