Os03g0837300

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Revision as of 13:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0837300| Description = Nicotinate phosphoribosyltransferase and related family protein| Version = NM_001058366.1 GI:115456460 GeneID:4334711...")
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Gene Name

Os03g0837300

Description

Nicotinate phosphoribosyltransferase and related family protein

Version

NM_001058366.1 GI:115456460 GeneID:4334711

Length

6618 bp

Definition

Oryza sativa Japonica Group Os03g0837300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36041553..36048170

Sequence Coding Region

36041610..36041767,36042504..36042648,36042909..36043028,36043187..36043321,36043405..36043466
,36043685..36043760,36044141..36044242,36044395..36044511,36044717..36044775
,36045357..36045531,36046175..36046309,36046402..36046500,36046690..36046798
,36047528..36047640,36047753..36047830

Expression

GEO Profiles:Os03g0837300

Genome Context

<gbrowseImage1> name=NC_008396:36041553..36048170 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36041553..36048170 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcagcggcggcgaacggggcggggggcggaggaggggtgccgcggccgacgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcctactggaaggccggcaagcacctcgaccgcgccgtctttgatctttacttccggaaaaatccctttggtggtgaattcaccatcttcggtggccttgaggagtgtataagattcattgctaacttcaagttaacagatacggaaataacattcctgcgatctgccatgcctacatgcgaggacggcttctttgagtaccttagttcaattgactgctcagatgttgaggtttatgccatccctgagggttctgttgtattccctaaagttccactgatgataattgaaggacctgttgcggttattcaacttcttgaaacaccatttttaagtctggtcaactatgcatccttggttactacaaacgcggcaagacacagacttgtagcagggaagtcaaagaatttacttgaatttggacttagaagggcccaggggcctgatggaggaatcagtgcatcaagatattgttatatgggaggatttgatgcaacaagcaatgttgcagcaggatggttatttgggataccaatacgtgggactcattctcatgcattcgtgagctctttcatgggtcttgatgacatcattgacaggacactcgctagttctgatggttcaaacaaatgcgaagactttgtctctctggtgcagaattggcttgccaggattaaggatgctggttcattgcgtggtacctttcgtgaaacaaatctaagtgagttggctgcattcacgtcatatgcgctggcatttccaaattccttcctggctttggtggacacatatgatgtcatgagaagtggagtgccaaacttctgtgctgttgctttagccctcaatgatatggggtataaggcggctggaattagattagactctggtgacttagcatacttatccgttgaaactcgtaagttcttccgtgcaattgaagaagaatttgggtttattggctttggaaaaatgaatatcacagcgagcaatgacctaaatgaggaaacaattgatgccttgaacaagcagggtcacgaggtagatgcatttggcattggtacctaccttgttacatgctatgcacaagcagcgcttggttgtgtgttcaaattagttgagattaacaaacaacctcgcattaaactgtctgaagatgtgacaaaggtatccataccatgtaaaaaacgatgctacaggttgtttggaaaagaaggttatcctttggttgacataatgactggagaagatgagccagccccaaaggttggtgagaggctcctgtgtcggcatcctttcaatgaatcaaagagggcatatgttgttccacagcatgttgaggagttattgaagtgctactggcctggaactacatccgaaccacgggaagagctaccatccatcaacgaaataaggagtcggtgcatgggctatctggaccgtatgaggccagaccacatgaggaggctgaatccaacaccgtacaaggttagcgtgagtgctaagctgtacgatttcatccacttcttgtggctcaacgaagctccggtaggcgaactgcaatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAANGAGGGGGVPRPTNPMVTPLLTDLYQFTMAYAYWK AGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECIRFIANFKLTDTEITFLRSAMPTCED GFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIEGPVAVIQLLETPFLSLVNYASLV TTNAARHRLVAGKSKNLLEFGLRRAQGPDGGISASRYCYMGGFDATSNVAAGWLFGIP IRGTHSHAFVSSFMGLDDIIDRTLASSDGSNKCEDFVSLVQNWLARIKDAGSLRGTFR ETNLSELAAFTSYALAFPNSFLALVDTYDVMRSGVPNFCAVALALNDMGYKAAGIRLD SGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASNDLNEETIDALNKQGHEVDAFGI GTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVTKVSIPCKKRCYRLFGKEGYPLVD IMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLKCYWPGTTSEPREELPSIN EIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ</aaseq>

Gene Sequence

<dnaseqindica>58..215#952..1096#1357..1476#1635..1769#1853..1914#2133..2208#2589..2690#2843..2959#3165..3223#3805..3979#4623..4757#4850..4948#5138..5246#5976..6088#6201..6278#actcgagtgctccggcgcacgagcggcacgcgcgcaccgccaccaccaccgagaataatggcggcggcggcggcagcggcggcgaacggggcggggggcggaggaggggtgccgcggccgacgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcctactggaaggccggcaagcacctcgaccgcgccgtgtcaggatccctcattcccttcccctcctcgatcccctctccatgaatccatccttttttttagacgcgtgtttccgctgctatccgatccgtcgtgctcgtcagctcttaagctcatgcgacggggtggtgatttagggacagtggaggaggagagggacgatcggttttggtgaatgctcggatatggcgtggaagaggcccaattggttattggtcctgagttttcgatctgtgttatgtgaattcatgtgcggtgcggattcgagatttccaactagcttttttctcaatttgatgatccacttaactgtaaccacgggtatttcgattcgagatttttctgtatgcagatgttgtttgaacaacatgtatgtaaagtggtagatatatgtcatcatagctgatgtaataaagtgaacatagtgtcctttttaaccttgtttaagaactcatatagaacactatcacctgtcatgtactgtgacgtgtgaacagatagaggagaaattgagaaatccatgtgcattaaaaagtcaaccaccataaggttttgcaaaggttataactaatctaattatccaatacggagtatgagattgtatgtcaccacatcacttcttcagtttgtcaatcttcagattgaatatatcaaatacaatactcttgtacccgctgatatattgtcttgaaagaaatacctgctaatatttactgtcacctttaatattttcagctttgatctttacttccggaaaaatccctttggtggtgaattcaccatcttcggtggccttgaggagtgtataagattcattgctaacttcaagttaacagatacggaaataacattcctgcgatctgccatgcctacatgcgaggtaggaattccaaacttgtagagaaaattgatgtgacattctgcattctataaatcttatgctcatcaaattcatgcatgaatgggcaaatcattttgagtgttcatacaactgaagggaagagggggtccatcctcccaagtgctcaggagcagacgaaatacacaaaatgttatagttgtcactaacatgtttggtgttttggtaattctattaatatcttttggcagcttttaatgaatatttatttattctgataggacggcttctttgagtaccttagttcaattgactgctcagatgttgaggtttatgccatccctgagggttctgttgtattccctaaagttccactgatgataattgaaggacctgttgcggtaagtatcaggagtgagttagcagctagaatccatagcagtagttgtcacagattgacttgtccaacatatgtctctatccagcactcctaaacgttgatgtcacagattgatcttttttccttcaaaaaaatgtcttgaattttcttttgtcctaggttattcaacttcttgaaacaccatttttaagtctggtcaactatgcatccttggttactacaaacgcggcaagacacagacttgtagcagggaagtcaaagaatttacttgaatttggacttagaagggcccaggtgagtcttacttttgaccttttgtcttgctatgtttgtcatccattaaccttcacatgaacttatagccacacatctatcaggggcctgatggaggaatcagtgcatcaagatattgttatatgggaggatttgatgcaacaaggtctggtttacaaaatgaacaaatctctctggctatacagttctgtgtgtcctgatatctatctggccgtcatcagttttttcttttgtagatattaaatattcttacacaatatatttatccttggacgactttgacgtgaaagctgaaatcctacaatgcttatacaaaaaagcttactgcaataatactctgacacgcttttacaacatgagcagcaatgttgcagcaggatggttatttgggataccaatacgtgggactcattctcatgcattcgtgagctctttcatggttagtggtaatatttctgatactcgggagttatttggatttttgctttgcaccaatttagaagtatcattcatgaggaaggatgtttacatccagatagacacttagtcaggtcaaaaatcaaaaccttctggtcagcaatgttttgactgcctagatgaacatatttcacttaccaaaacagatggccatcccttctcattgatattcaaatgccctagtgttagaggcagccaggtatcaagttcatagtcgtgactaatgaaatgttttacatcatgagccattgagccttgcatctatatcattacttgttcttgccaagaaattggacatattttgtaacagtattttttctctaatatattatatgtctgtagggtcttgatgacatcattgacaggacactcgctagttctgatggttcaaacaaatgcgaagactttgtctctctggtgcagaattggcttgccaggattaaggtgtacagatgaacattgtcttgcttaacaagtggagatgatatcttctgtaatttttagttatacaatttactatacgttgtagaacttctagttagtaacaccatatgttgaactatcacaactaaagatcgtcattatgatattctcaggatgctggttcattgcgtggtacctttcgtgaaacaaatctaagtgagttggctgcattcacgtcatatgcgctggcatttccaaattccttcctggctttggtggacacatatgatgtatgtcaatctttctctgcagttgtatattgaaactttcaatggcgtggccaaatttccaattgtttaatgattgctttactgtatctgcctaggctgtaaaccttgtgcatgctcaaaatgatgtgtgaccttgacagaactaatgtgacaaatcgatttctatcagaacgcagctgatatttaaatatgtgtggtttgctaggtcatgagaagtggagtgccaaacttctgtgctgttgctttagccctcaatgatatggggtaatttagcctcaactcttctcggtaatacttgtgtttgcacaacttgcttctattacatgggaagttatagccaatgaataacacaactaaaaaaggagggttctcactctgggtgtcaccttgctattaaattctactacgtagtttccttcactgttgtcaaaaaaaagggtttgcatgggtgaatgtgtacactttcaatatatttcttttactccaatggttcgttggtgcctaagtagttactcttaggactcatttattagtaccaatgatgtgatatagtgtacaaagtagttcaaacaagcatcttgagcacaatctcccaaaacatcacatggttagtcagctccctgttttagaaattgttttccttaatgacatttttttttatatactgtacaaatatagattctgtgtattgctggaggcgcatgtcgaatgctagttgctttgatgttttaacaaatgaacctacgaatggatggattttcttgttatgctgttgcttttcctgtcatgattaaaagggaaaggtaatgtctcgcttttattgactctgaaaattttcatttcaggtataaggcggctggaattagattagactctggtgacttagcatacttatccgttgaaactcgtaagttcttccgtgcaattgaagaagaatttgggtttattggctttggaaaaatgaatatcacagcgagcaatgacctaaatgaggaaacaattgatgccttgaacaagcaggtatgctgtacttcagagtagctgtgaagaattggtttgtgatgccataccatccagtctttcaatctaactgtgttctgaagttactccctccatcctacaatataagggattttgccccttctagttgtcccacaatataagggattttgatgtactacttgtcacatccatcaactccaattcaaatttttacctattttaaccctcaactacccactcacctataatcaaatatcatttaataggggcattctagtattttcttgatatccttaaacttacccaaaagggaataatcccttatattatgggatggagggagtaactgatatattctgatttgcacaacgatttatgtcgatattaactacagattggacccagctatcctggctggtcctgctaactatatataatataaaaaattgcttaaaaatacttcttatcagctagggtgatggtgtcatggtggcattgaaatctgctactgactactgtaaaccctttgtttcttggtatttattgacaacagagttgcagaaacagtctcaaaagcctgtgttggatattcgcatgctcagtgtatcccttttataaccttgctatgatgtgggacgtgattattgataattttatgtagggtcacgaggtagatgcatttggcattggtacctaccttgttacatgctatgcacaagcagcgcttggttgtgtgttcaaattagttgagattaacaaacaacctcgcattaaactgtctgaagatgtgacaaaggtatatatgccttcactgagcaaaagtacttctacctgttcatgagactatgatgcatcagaaagacctaaaactgcagttctgtgctccaggtatccataccatgtaaaaaacgatgctacaggttgtttggaaaagaaggttatcctttggttgacataatgactggagaagatgagccagccccaaaggtaaacaacatccacgttataatcattaaacttgtcattcggaaaagaatatatatattttttctacttcaaaacgctacgtgcttccagttagcaactagtatcttttattgcttgctctagttctccaaactcctgtagcacatctgatatatctgttgattttgtcatttctggaacccttgataggttggtgagaggctcctgtgtcggcatcctttcaatgaatcaaagagggcatatgttgttccacagcatgttgaggagttattgaagtgctactggcctggaactacatgtgagtatccacctggattactttacttatatgtctagtaactagatccggatatacgcttcacttgccatgttgattccattttgtgaagtatatattcacagaaatttggttgccataggcctgcactaatatgatcttttgcctttggctggatatttacagtttctaaaaataaagaggtctctagaaataatgatgtctatcagcactggactaccatactaaatatgtattaacaggcaacatgataacttgatatattgaattcaccaaagtaactagctatcgttgcaataatgacactgacaaacaaaccaatattgtggggttttataggcacatttattaattttaagataaaagtgtggatctattgcaacaacagtttaccgttagttgagaagtactccctcctttcaaaaatctgatacctatttctttttgcatcaaaaccaagaagcaattaactcactcaccatgtagcaaaaccaatgaacatgtaacaagtattagaatgacttcttggtttccgatcaacaatttaatttagcacatagcgactatagataggacttagatttttggaaaaaccaaagaatgaaataggtctcagatttttggaaggagggagtactaaattgatgagttcaaagtgcgttgtactctatttctcctatttgatgctacttgaaaagcccattgatagatactgttcttgttctgaagccgaaccacgggaagagctaccatccatcaacgaaataaggagtcggtgcatgggctatctggaccgtatgaggccagaccacatgaggaggctgaatccaacaccgtacaaggtcctgctcctcctttagctatagcctatatatggattttttggattataattgatctgactacctgacgtttcaaacttacgtgacactcccactgcttattccttcacaggttagcgtgagtgctaagctgtacgatttcatccacttcttgtggctcaacgaagctccggtaggcgaactgcaatgaaggaagaaaaaatgccggcgtggtcatcactgaatcaaagtttactatcttattatgagaataatgtgcgcaaaatcgtgtaccatatgggtttctttcaaaggcaatttgacactgcatcagcagagccccaaagatcagtacgcacgctatgcagtgcagactgcagagaaaatagcgttgagaattaaacatgctgttcggctacaggaattaaattttcaggcacggccttttgtctagtatgtaaagcccatatccgggggatggaccggtgtattcggccttgctaaagaaggcctacataaacactttaacctagtgatggttttttccttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0837300, RefSeq:Os03g0837300