Os03g0839000

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0839000| Description = Zinc finger, RING-type domain containing protein| Version = NM_001058374.1 GI:115456476 GeneID:4334720| Length = 278...")
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Gene Name

Os03g0839000

Description

Zinc finger, RING-type domain containing protein

Version

NM_001058374.1 GI:115456476 GeneID:4334720

Length

2781 bp

Definition

Oryza sativa Japonica Group Os03g0839000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36106601..36109381

Sequence Coding Region

36106823..36106935,36107023..36107074,36107171..36107272,36108093..36108292,36109212..36109320

Expression

GEO Profiles:Os03g0839000

Genome Context

<gbrowseImage1> name=NC_008396:36106601..36109381 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36106601..36109381 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcctcgtcggcgtcggctgtgccgccggaggacgacgtctgctcggtctgccacgaccgcttccggatcccctgccaggccaactgctcccattggttctgcggagagtgcattatccgtgtttggaatcatggaccttctgtacagccttgcaagtgtcccatttgccgtcgccttattaatcttctggtaccagcaaatgtatcaatagataatgatgatgatccgcaaattcagcatgttctaggagaggttcagcattacaaccgcatatttggtggaacaccccgcaacctgactcagaggttgcaagacctaccctttttcatcagaagactgttcagggaactactggatccccagaggaccctcccacttgtcttcagggcgaggatggtcatgatggtagccctgagtgcaatttatgtcctgagccccatcgacattcttcctgaaaacgtgctggggctgtttggattcttcgatgacttcctcgtgctgctgatcgtgttcctccaccttgctgctgtctaccgttctctgctgctctaccgccacggaggccactga</cdnaseq>

Protein Sequence

<aaseq>MSSSSASAVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVW NHGPSVQPCKCPICRRLINLLVPANVSIDNDDDPQIQHVLGEVQHYNRIFGGTPRNLT QRLQDLPFFIRRLFRELLDPQRTLPLVFRARMVMMVALSAIYVLSPIDILPENVLGLF GFFDDFLVLLIVFLHLAAVYRSLLLYRHGGH</aaseq>

Gene Sequence

<dnaseqindica>2447..2559#2308..2359#2110..2211#1090..1289#62..170#ctcttgccgacgactcggaaaaaaaccgcggacaccgcgtccgctcgacggagggaaggggatgagctcctcgtcggcgtcggctgtgccgccggaggacgacgtctgctcggtctgccacgaccgcttccggatcccctgccaggccaactgctcccattggttctgcggttcgtctcccaatcttccctcgcccttacccccccccccaacccccccgcgcgcttcctggaacctcgatccacctgtttccaccgattaggttgggagattatgcgaaactgtaggttttcatttgattccggtcgtttttttttggcttccgctggatatagaaatggtttgtattggctagaattgacaaggatgttgtagattacgcggtttttgagttggctgcatgatgagaaggctctaatttgccggtttaggataatttgtgtatgtgtgtgtcgatgccaaatgagggtttatggtggttttttggtaggttggttgaaattttggaactcatgtagctggaagactgggagtagtgtgtaatacattctacatgaactgatggaaaaccaggtcagatctaagattgtgccatacacttgaataccaatgaacaccacaattgctcatcgagcaactatgtggaaaagtcaacttcatccctaaagccaatcaaacaccatctcagtgcttgtgcgcattcatatttataggactgaattaggtttatacattaggattatttgggataaccaaatggctcttacccccttagttcaatggtattacttgtcatgttatgaaatggtagcattaattttattcactccaaaagagcaatatcttctatgatgcatgaatcaggctcaacactatgaaatcagtatgatatgatatattatactaccactttgtcttttacaacagagctacccactgcatcagttattctttttatttcagtttggccataagacctggtagcgcatatgctttttgagcatgtatttcctacccaactatacttccttcactacttctctagtattactgaaagtattagtagtaactatgctaattttgttgcaggagagtgcattatccgtgtttggaatcatggaccttctgtacagccttgcaagtgtcccatttgccgtcgccttattaatcttctggtaccagcaaatgtatcaatagataatgatgatgatccgcaaattcagcatgttctaggagaggttcagcattacaaccgcatatttggtggaacaccccgcaacctgactcaggtttatacattgttcacgaaagcttacttattttgtcttcagatttggaaatttgaatgtacataggactaatcaacatcaataaatgttgtatttgcaaacacacacacacacacacatcaataaatgttctccaaggggatatgtttcattttctcataattagctcattgttccttgcttgcatgctccccaaattcttttataggattcatagtgtagttttgattcctgcacaggttatgattgagaaatcatctgtcttctaactcctacaatgcatgcacatttcagatactggcatgcaaatgggcctctgcaccgttgagttctaaaaaatggtagcatgcatttaatattgttgctagataatctctattaggtcaggtttcataacacctagcattttatgcctttctgttggttcagtatctttagctttctatttctttgtgattgtgtatccctatacagagtaacatccatttttacataatcaaaccaacgctaatagtagcttctactcttgctctgaaaggcagtacttcaacattaatcagggtaaaatggaaacatgaacacggttactctgttatgttggaaagattatagataatagtgtgacatacccttattcatcattactctatttgtacatattgactagagttgtcatagttgttgtacgaggaatgtgactaaggtgtaacatgttgtcatatttaactatcttagatataacaaatatgagcatatctagttgactaactgcagtagctttggtagctaattacttgatgttttcacgatcttttttcagaggttgcaagacctaccctttttcatcagaagactgttcagggaactactggatccccagaggaccctcccacttgtcttcagggcgaggatggtcatgatggtaaggttttatgccattaaagtgccttttgttatctgtaaagctactatatgtttgtggaagtaaacattgtttctcactgattaaaatttgcaggtagccctgagtgcaatttatgtcctgagccccatcgacattcttcctgaaagtaagttcgatattcttctccgcgatctgaattccagtaccactgggcatacgattgttaaatgttaatgttttgaatatattatagacgtgctggggctgtttggattcttcgatgacttcctcgtgctgctgatcgtgttcctccaccttgctgctgtctaccgttctctgctgctctaccgccacggaggccactgaattgctgctgcacattacgtgatggcagatggagtacttgcgtccctggctgacgttctgagacaagagatatttcatttgtgctggaagagattgctagctaaagtcgatgatgattgatggtacgaatgatggcggcagtagtttctctccccctgtgtattctatttcgctatgctatgccttgtttggtgatattcacatggtggatttaatgagacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0839000, RefSeq:Os03g0839000