Os03g0839200

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0839200| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001058376.2 GI:297601959 GeneID:4334722| Len...")
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Gene Name

Os03g0839200

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001058376.2 GI:297601959 GeneID:4334722

Length

3538 bp

Definition

Oryza sativa Japonica Group Os03g0839200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36116939..36120476

Sequence Coding Region

36119468..36120058

Expression

GEO Profiles:Os03g0839200

Genome Context

<gbrowseImage1> name=NC_008396:36116939..36120476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36116939..36120476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttggtgatgatgcaggtggggaatgaactggggggagggaagccgaggagggcgaggatggcggcgatggtggcgctggggtgcgcggtggtgatcggggtggtgcacgtggcgtggacggcggcgttcagccgggagtgggtggagctgttcacgcgggaggcggcggtggtgaggctggcggcggcggcgatgcccatcctggggctgtgcgagctgggcaactgcccgcagaccacgggctgcggcgtgctgcgcggcacggcgaggccggccgtcggcgcgcgcatcaacctgctctccttctacctcgtcggcacccccgtcgccgtcaccctggcgttcggcgcccgcgtcggcttcggcggcctctggtacggcctcctctccgcgcaggccgcctgcgtcgcgctggtcctcctcgccgtcgtgtggcgcaccgactggcacctcgaggccctccgcgccaagaagctcaccggcctcgagatgatcgccgccgccgccgaaggcgacgacgacgagtgcaagcgcctcatcgcgccgctgccgccgcccgatggtcacgatgtcgccgtcgacgtcgtgtag</cdnaseq>

Protein Sequence

<aaseq>LVMMQVGNELGGGKPRRARMAAMVALGCAVVIGVVHVAWTAAFS REWVELFTREAAVVRLAAAAMPILGLCELGNCPQTTGCGVLRGTARPAVGARINLLSF YLVGTPVAVTLAFGARVGFGGLWYGLLSAQAACVALVLLAVVWRTDWHLEALRAKKLT GLEMIAAAAEGDDDECKRLIAPLPPPDGHDVAVDVV</aaseq>

Gene Sequence

<dnaseqindica>2530..3120#gaggcagcatagctcggagacagcaaagctacaaagtagaatcaaagacatccaagatttgccatggccatcccgctgcaggggaaggcgcagcagcagcaaggggagggcggcaagggcgacggcgcggtggatgacgacggggacgaccagccgtcggtggcgtcggagctgcgtgagctgtgggggatggcggcgccgatcacggcgctcaactgcgtcgtctacctgcgcgcgatggtgtccgtgctctgcctcggccgcctcggcccgctcgacctcgccggcggcgcgctcgccatcggcctcaccaacatcaccggccacagcgtcctcttcggcctcgcctccggcctcgagccgctctgcgcccaggcgttcggctccaagaactacgacctcctcacgctctcgctccagcgcgccgtcctgctgctcaccctcgccgcgctgcccatcgcgctgctctggcttcacgtcggccccatcctcgtcgcgctcggccaggaccccaccatctccgcctccgccgccgcgtacgccgcctacgcgctcccggacctcgccgccagcgccgtgctccagccgctgcgcgtctacctccgctcgcaggggatcaccaagcccatggccgcctgctccgccatcgccgtcgcgctccacgtcccgctcaacgtgctcctcgtgttcggcctcggcttcggcgtgcgcggcgtcgcggccgcgcaggcgctcaccaacaccaacatggtcctcttcctcctcgcctacatccgctggtcgcgcgcctgcgacgccacgtggaagggctgggcgcgccccgccgccgtggcgagcggcctcgccggcctcgtccgcctcgccgtgcccagctgcgtcggcgtctgcctcgagtggtggtggtacgaggtggtcaccgtgctcgccgggtacctgccggaccccgccgccgcggtcggcgccgccggcgtgctcatccagaccacgagcctcatgtacaccgtgcccatggcgctcgccgcctgtgtctctactcgggtacgcctctcatcactcaccaacttaatttgcactaatcactcatatcagtcactgcatcccaacgggaaaaaaataaaggtattgcatcaagattcgtgaaaacgaaactaaaatcctctagctacaatagcagattattaggtcagctgcagcacgaactctaaaagacaatgtgtgtataacagtgaaaccatatactaataatatagtaagcaaccattgtatgaattaactattagatggctataggtgaattggagttagtagttggctatactaaccttgctctaaaaagccacaaccatggtcagcttgccaacatctttacacacgaatatttggcacattgccacttttattttgattcgtgccaatccgaatgtcaacagctcaggctgagattttgctttgagttcacatcgccggagttaattcgtcaacgggtagggttgttatactttcgagaaaattcagtgagcgagtttgttatgagctagtgctgggcaacatcatcatatagtactaggcatatagcataatttgcgccgagctagatgtttttaatcctccttcttgtttgctggtgtcactgttatctgaacttatagaatagctcaagttcagatacaaacaagcgaaacgactgaatctatcaagatagatatatatatcttcgtgaacagatttgtgtcccaatcttggcacaagaagataagtgcaaccttagcacaacaagtttatcctaattgcttcctgccacacactcgtcaatcgcgaaatcatgtggctaagtgtgtgttgatgagctagatactcctaagactgaattttcgatgtatagtagtaacagataccaacattgtagcaacagattcatctctctttttttttatagcatggatatataaccaaatcttgaacatgttcatcatcttccctacacacatcaatcaacgggcaaagcaagcgagagaagcgacaaaattctgaatttttgctgattttgtacagaatcacccccttcttttaaaggctggttgccggataccatttctatcagagaatcgattttagtagcactatttactgcatgcgaaacgggacaaagcttgtgggtttttttttttggtttgtttcttcctctggccattggtggttggtcttgtcattgctcgtgcatgtcagcacagtgcacacgaacagtgcttcctctgggtgccagtgaagctcacagctgcactgtaggtgttcggagaaaagacagaatttgcacaccgcgatgtcgctgttcatccactgtttgtgaattgtcaatttgtcatgcgttgtacagtgcagaattgaatcaggagttgcaatgttgatctggtttacttcccaactttttcttcaaactttcaacttttttatcacatcgaaactttcctacacgcataaactttcaacttttatcgttctaatttcaattaaactttcaattttgtttgattggtgatgatgcaggtggggaatgaactggggggagggaagccgaggagggcgaggatggcggcgatggtggcgctggggtgcgcggtggtgatcggggtggtgcacgtggcgtggacggcggcgttcagccgggagtgggtggagctgttcacgcgggaggcggcggtggtgaggctggcggcggcggcgatgcccatcctggggctgtgcgagctgggcaactgcccgcagaccacgggctgcggcgtgctgcgcggcacggcgaggccggccgtcggcgcgcgcatcaacctgctctccttctacctcgtcggcacccccgtcgccgtcaccctggcgttcggcgcccgcgtcggcttcggcggcctctggtacggcctcctctccgcgcaggccgcctgcgtcgcgctggtcctcctcgccgtcgtgtggcgcaccgactggcacctcgaggccctccgcgccaagaagctcaccggcctcgagatgatcgccgccgccgccgaaggcgacgacgacgagtgcaagcgcctcatcgcgccgctgccgccgcccgatggtcacgatgtcgccgtcgacgtcgtgtaggacgacgtcgtttacgatcgtgcacgtacgcttttggttttgggtacacggcgacgcatggcgcggacacatgcatcgatcgatcgttgatcgtacggaccgaattggcctagctatatgctgctgatcatacgctacgcgctgcaagttggggcgtcagtggctgaagctgcgtgcgtgcgtggttggaaaatgacaggggctgaattagattaagtgggctagcaatatcaggatcaacaagctatatatagctacaagcactggtgaggtgggtttgttttgtgtgtacatgtgcgtgtttgtgtgagtgttgacaagttgagatcgatggcgatggaacatgcaacgtgtactgctagatgatcaggagctagctaggcctgcctgaatgatgatcatggagtatgatattgca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0839200, RefSeq:Os03g0839200