Os03g0840200

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0840200| Description = TolB, C-terminal domain containing protein| Version = NM_001058381.1 GI:115456490 GeneID:4334728| Length = 2306 bp| ...")
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Gene Name

Os03g0840200

Description

TolB, C-terminal domain containing protein

Version

NM_001058381.1 GI:115456490 GeneID:4334728

Length

2306 bp

Definition

Oryza sativa Japonica Group Os03g0840200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36182827..36185132

Sequence Coding Region

36182883..36184949

Expression

GEO Profiles:Os03g0840200

Genome Context

<gbrowseImage1> name=NC_008396:36182827..36185132 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36182827..36185132 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccactcctttgctcgccgcgctcctcgccgccgcgctgctcgcctcgccggcggcgccggcggcgtcggccagcggcggcaccatcgtcttcaccaccctcggccgcagccgctacgagttcgacatcttctccctccccctcgcgccctccccccataaccccgccgccgccgccgagctccgcctcaccgatggcgtctccgtcaactacaacggcaacttcgcccccgcctccgattccatcctcttcgtctccgagcgcaacggctccctcaacctctacctctccccggttccctcctcccgccgcgaggcgctcgagtcggcgtcgtcgtcgtcgtcttcggcggcggcgacgatctcgccgctcctcccatgggagccaatcgcgctcaaggaccggccgtcgctcacccccgacggctcccgcctcgtctacgtctccaccgccgtccccgccgcggagccgcgcagcagctgggccgccgtgtactccaccgagctgtccaccggccgcacgcgccgcctcacgccgcttggcgttgcggacttcagccccgccgtgtcgccctcgggcgagtggacggccgccgcgtcgcccggcgccgccggttggagcggcgaggtcgaggacctgcgcactgacatctacgtcttccgcaccgccgacgggtcgcgccggtcgctcgccatccgtgacggcggctggccgagctgggccgacgagaccaccgtcttcttccaccgccgggacagcgacggttggtacggcgtctaccgcgccgagatctccgtcaccggcgacggggtcgaagcggcgtccgtggagcgaatcaccccgccggggttccacgccttcacgccggccgcgtcgcccggcgcgccggggctcgtggcggtggcgacacggcgggcgggctccgactaccgccacatcgaggtgatcgacgtgagcagcgacggcaagaacgcctacttcgaggtgaccaggcccgtggcaccgcgcgtgcaccacttcaacccattcatctcgccggacggcgcgcgcgtcgggtaccaccggtgccgggggagagggaacggcgactcgccgctgctgctggagaacatcaagagcccagggtcaccggacacgttctcgctcttcaggatcgacggctcgttcccctccttctcgcacgacggcaagaagatcgcgttcgtcgggctgccggggatgtacgtggtgaactccgacggctccggtggtcgccgcaagatcttctccgggaacgccttctcgacgtcgtgggactggaagaggaaaggcgtggtatacaccagcatcgggccggatttcgccagcgagaccacggaggtggacgtggtggccatctccctcggcgacgacgacgacgagtcaaccatctcgatgaagaagctgaccgtgggaggcgagaacaacgcgttcccgtcgccgtcgccggacgggaagtgggtggtgttccggtcggggagatccgggaacaagaacctgtacatcatcgacgccgaggacggcgaggccggcggcatccggcggctgacggaggggccatggtcggacacgatgtgcaactggtcacccgacggcgagtggatcgccttcgcctccgaccgccatgccccggggagcggcagcttcgccatctacatggtgcaccccaatggcaccgggctgcggcgggtggtgcacagcggcggcagcggccggaccaaccacccatggttcagcccggactccaagagcctcgtcttcacctccgactacgccgccgtctccgccgagccggtctccaaccctcaccattaccagccatacggcgagatcttcaccgtcgacatcgacgggtccaacatccggcggctcacgcacaactcgttcgaggacggcacgccgtcgtggacgccatacttcctggagccccgagacgtcggcgagacgctgcaagcctcgggcaggtgcgcgttccaggattgccactggctcaacatccaagatgctgcccaacctgaagagctcaactatggcaagagctgctga</cdnaseq>

Protein Sequence

<aaseq>MATPLLAALLAAALLASPAAPAASASGGTIVFTTLGRSRYEFDI FSLPLAPSPHNPAAAAELRLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPS SRREALESASSSSSSAAATISPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRS SWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDI YVFRTADGSRRSLAIRDGGWPSWADETTVFFHRRDSDGWYGVYRAEISVTGDGVEAAS VERITPPGFHAFTPAASPGAPGLVAVATRRAGSDYRHIEVIDVSSDGKNAYFEVTRPV APRVHHFNPFISPDGARVGYHRCRGRGNGDSPLLLENIKSPGSPDTFSLFRIDGSFPS FSHDGKKIAFVGLPGMYVVNSDGSGGRRKIFSGNAFSTSWDWKRKGVVYTSIGPDFAS ETTEVDVVAISLGDDDDESTISMKKLTVGGENNAFPSPSPDGKWVVFRSGRSGNKNLY IIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFASDRHAPGSGSFAIYMVHPNGT GLRRVVHSGGSGRTNHPWFSPDSKSLVFTSDYAAVSAEPVSNPHHYQPYGEIFTVDID GSNIRRLTHNSFEDGTPSWTPYFLEPRDVGETLQASGRCAFQDCHWLNIQDAAQPEEL NYGKSC</aaseq>

Gene Sequence

<dnaseqindica>57..2123#ataggcaaaaaaatccccaaatccaacaacctgtagcccgcttcagtccgacgaccatggccactcctttgctcgccgcgctcctcgccgccgcgctgctcgcctcgccggcggcgccggcggcgtcggccagcggcggcaccatcgtcttcaccaccctcggccgcagccgctacgagttcgacatcttctccctccccctcgcgccctccccccataaccccgccgccgccgccgagctccgcctcaccgatggcgtctccgtcaactacaacggcaacttcgcccccgcctccgattccatcctcttcgtctccgagcgcaacggctccctcaacctctacctctccccggttccctcctcccgccgcgaggcgctcgagtcggcgtcgtcgtcgtcgtcttcggcggcggcgacgatctcgccgctcctcccatgggagccaatcgcgctcaaggaccggccgtcgctcacccccgacggctcccgcctcgtctacgtctccaccgccgtccccgccgcggagccgcgcagcagctgggccgccgtgtactccaccgagctgtccaccggccgcacgcgccgcctcacgccgcttggcgttgcggacttcagccccgccgtgtcgccctcgggcgagtggacggccgccgcgtcgcccggcgccgccggttggagcggcgaggtcgaggacctgcgcactgacatctacgtcttccgcaccgccgacgggtcgcgccggtcgctcgccatccgtgacggcggctggccgagctgggccgacgagaccaccgtcttcttccaccgccgggacagcgacggttggtacggcgtctaccgcgccgagatctccgtcaccggcgacggggtcgaagcggcgtccgtggagcgaatcaccccgccggggttccacgccttcacgccggccgcgtcgcccggcgcgccggggctcgtggcggtggcgacacggcgggcgggctccgactaccgccacatcgaggtgatcgacgtgagcagcgacggcaagaacgcctacttcgaggtgaccaggcccgtggcaccgcgcgtgcaccacttcaacccattcatctcgccggacggcgcgcgcgtcgggtaccaccggtgccgggggagagggaacggcgactcgccgctgctgctggagaacatcaagagcccagggtcaccggacacgttctcgctcttcaggatcgacggctcgttcccctccttctcgcacgacggcaagaagatcgcgttcgtcgggctgccggggatgtacgtggtgaactccgacggctccggtggtcgccgcaagatcttctccgggaacgccttctcgacgtcgtgggactggaagaggaaaggcgtggtatacaccagcatcgggccggatttcgccagcgagaccacggaggtggacgtggtggccatctccctcggcgacgacgacgacgagtcaaccatctcgatgaagaagctgaccgtgggaggcgagaacaacgcgttcccgtcgccgtcgccggacgggaagtgggtggtgttccggtcggggagatccgggaacaagaacctgtacatcatcgacgccgaggacggcgaggccggcggcatccggcggctgacggaggggccatggtcggacacgatgtgcaactggtcacccgacggcgagtggatcgccttcgcctccgaccgccatgccccggggagcggcagcttcgccatctacatggtgcaccccaatggcaccgggctgcggcgggtggtgcacagcggcggcagcggccggaccaaccacccatggttcagcccggactccaagagcctcgtcttcacctccgactacgccgccgtctccgccgagccggtctccaaccctcaccattaccagccatacggcgagatcttcaccgtcgacatcgacgggtccaacatccggcggctcacgcacaactcgttcgaggacggcacgccgtcgtggacgccatacttcctggagccccgagacgtcggcgagacgctgcaagcctcgggcaggtgcgcgttccaggattgccactggctcaacatccaagatgctgcccaacctgaagagctcaactatggcaagagctgctgagtgaagccatggcactggctgatcacgctgaattaagccaataaaccatggatattggagtgcatgaatgtagatataatactgttatgtagtagcatgaatctaccaggaataagatcatgtacactgatgccatcttcagggcaaacgatatcagaattgctacatatctagttttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0840200, RefSeq:Os03g0840200