Os03g0840800

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0840800| Description = Similar to Phospholipase D| Version = NM_001058384.1 GI:115456496 GeneID:4334732| Length = 4702 bp| Definition = Or...")
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Gene Name

Os03g0840800

Description

Similar to Phospholipase D

Version

NM_001058384.1 GI:115456496 GeneID:4334732

Length

4702 bp

Definition

Oryza sativa Japonica Group Os03g0840800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36200928..36205629

Sequence Coding Region

36200982..36201275,36201702..36201905,36202023..36202193,36202449..36202597,36202927..36203074
,36203161..36203229,36203314..36203574,36203770..36203964,36204319..36204441

Expression

GEO Profiles:Os03g0840800

Genome Context

<gbrowseImage1> name=NC_008396:36200928..36205629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36200928..36205629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggatggtgtcatgcatacacacgacgaggagaccaaaaagtttttcaggcattcaggtgttcactgtgtgctggttcctcgctatgccagcactaagcttagcattttcaagcagcaggtagtgggaactttatttacacatcatcagaaatgtgtgcttgttgatacacaagctactgggaacaaccgcaaaatcactgctttcattggtggtctagacttgtgcgacggcagatacgatacacctgaacataggcttttcaaagatcttgataccgctttcaacaaggacttccataatcctacatttcctgttaattcatatggaccaagacagccatggcatgatttacactgcaagattgagggccctgctgcctttgatatactgacaaactttgaacagcggtggagaaaagcaaccaaatggaaggtcaatcttaagaaagttgcaagttggcatcatgacacgctgataaaaataaaccggatgtcctggattgttaccccagctgcagatgaggctaatgcacatgtttgtgaagaaaaggacccagaaaattggcatgtgcaggtgttcaggtcaattgattcaggttctgtaaaggggttcccaaaaattgttcaggaggcagagtctcagaatcttgtctgtgcaaagaatctaaagatcgacaaaagcatacacagtgcatatgtcaaagcaatcaggtctgcgcagcacttcatatacattgagaaccagtatttcattgggtcatcgttcttatggtcctcacataaaagcgcaggtgctgataacttaatacctgtggagctggccttgaagattgcaagcaagatcaaggcaaatgagcagttcgcggtgtacattgtcctaccaatgtggcctgaaggcatcccaaccgcggcaccgatgcagcaaatcctcttttggcagagccaaacaatgtctatgatgtacaagatcatagcggacgctctgcagatgcagggattggttgaagctcaccctcaagattatctgaatttctactgcctcggcaagcgcgaggtcgccgccggtgacagcatgtcccagacgagcttatgcaatgacaactccactctgcgctcggcacagaagctccggagattcatgatctatgtgcactcgaaagggatggtggtggacgacgagtacgtcatcatcggatcggccaacatcaaccagaggtccatggaaggctgcagggacaccgagatcgccatgggcgcctaccagccacactacaagtggtctgctgatcacggccaaggccctcctcgtggacaggtgtacgggtacaggatgtcgctgtgggcggagcaccttggggcggtggaggagtgcttcgggcggccggagacgggggagtgcgtgaggcgggtgagggagatggcggaggagaactggagggcgtacgtgtcgccggagatggaggagacgaaggggcacctgatgtgttacccgttgaaggtggacaaggacggccgcgtccgctctctccccggccacgactgcttccccgacgtcggcggcaaggtcctcggcactcaaacctcgctccccaatgccctcaccacctag</cdnaseq>

Protein Sequence

<aaseq>MQDGVMHTHDEETKKFFRHSGVHCVLVPRYASTKLSIFKQQVVG TLFTHHQKCVLVDTQATGNNRKITAFIGGLDLCDGRYDTPEHRLFKDLDTAFNKDFHN PTFPVNSYGPRQPWHDLHCKIEGPAAFDILTNFEQRWRKATKWKVNLKKVASWHHDTL IKINRMSWIVTPAADEANAHVCEEKDPENWHVQVFRSIDSGSVKGFPKIVQEAESQNL VCAKNLKIDKSIHSAYVKAIRSAQHFIYIENQYFIGSSFLWSSHKSAGADNLIPVELA LKIASKIKANEQFAVYIVLPMWPEGIPTAAPMQQILFWQSQTMSMMYKIIADALQMQG LVEAHPQDYLNFYCLGKREVAAGDSMSQTSLCNDNSTLRSAQKLRRFMIYVHSKGMVV DDEYVIIGSANINQRSMEGCRDTEIAMGAYQPHYKWSADHGQGPPRGQVYGYRMSLWA EHLGAVEECFGRPETGECVRRVREMAEENWRAYVSPEMEETKGHLMCYPLKVDKDGRV RSLPGHDCFPDVGGKVLGTQTSLPNALTT</aaseq>

Gene Sequence

<dnaseqindica>4355..4648#3725..3928#3437..3607#3033..3181#2556..2703#2401..2469#2056..2316#1666..1860#1189..1311#cgtgcccccgcccgcgccgccatctctctccttcctcctgtattgttacgcaagccatccgagccaagcaggagaagaggaagaggaagaggaagaggaagagcatgcccccctgcgcggcatggggaaaagctccgccgacttgtccgcctcctcggagtcggccgtgctcctgcacggcgacctcgacatttggataaccgaggccaagtgcctccccaacatggacatcatgtcggagcggatgcgccgcttcttcaccggctacggcgcctgcggctcctcgtgcggcggcaccggcgacaacgcgcgccgggccggcggcggcgtcaggcccaagaagatcatcaccagcgacccctacgtctccgtctgcctcgccggcgccaccgtcgcgcagacgcgggtcatccccaactccgagaaccccaggtgggaggagcgcttccgcgtcgaggtcgcccacgccgtctccaggctcgagttccacgtcaaggacaacgacgtcttcggcgcgcagctcatcggcgtcgcctccctccccgtcgacaggatcctctccggcgcccccgccgagggctggttccccatcgacggccactgcagcagcaaccccatgcggccgccgccggagctccgcctctccgtccagtacaggcccatcgacgacaaccccctctacaggggcggcgccggcgccgtccccaacgcctacttccctctccgccgaggtggcggcgtcaccctctaccaggacgcccacgtcgccgacggcggcctcccggccatccagatcgccggcggaagggcgtacgagcacggccgatgctgggaggacatctgccactccatcgtggaggcgcaccacctcgtgtacatggtcggatggtccatctaccaccccgtcaagctcgtcagggagcccacccgggcgctccccggcgagacgccatcgacgctcggcgagcttctcaagaaaagggctcgcgagggcgtccgcatcgtcatcttgctctgggacgacaagacgtcgcatgacaagttccttctcaaaacggtagtatatctatctatcatcttttttatatcctttcttcttcttcttcttcagttgtactctctgatgaattgatatcgtcaaactcacaagaattcggaaatgatattgtgagaaataattcaggttgaatgcaggatggtgtcatgcatacacacgacgaggagaccaaaaagtttttcaggcattcaggtgttcactgtgtgctggttcctcgctatgccagcactaagcttagcattttcaagcagcaggtcagaaatctttgtctgatatagcgctataatttaactgcctcattagttattactagtacatgaacataagtatagtaattacttgttattgaatataatacctactagtacacactatccaattatgcctgcttttacaaatcacatacaagtaggttctcactagttcatgttctgttgcttatctgcatttgtcaggatgaatagtcctgatgttctttctgagtctgagaaagctacactaaatattcatgcagcaaactcatgccttaccatttgttcatttgcctgttaatagttcataaaaaacctttcgatgatgcttgctaatgtaatatttctcttctccaggtagtgggaactttatttacacatcatcagaaatgtgtgcttgttgatacacaagctactgggaacaaccgcaaaatcactgctttcattggtggtctagacttgtgcgacggcagatacgatacacctgaacataggcttttcaaagatcttgataccgctttcaacaaggacttccataatcctacatttcctgtaagttctccagttcataagctgttatcagatcatggagttccttcatagatgtttacacaaattcatgtgaattgctaaatatctccataaaatgtattggcagcacgttgtacaatctgacttttctataaaatatatcttctctatctgataagaatatgaacgccgaggatcctttctcctgatctacaggttaattcatatggaccaagacagccatggcatgatttacactgcaagattgagggccctgctgcctttgatatactgacaaactttgaacagcggtggagaaaagcaaccaaatggaaggtcaatcttaagaaagttgcaagttggcatcatgacacgctgataaaaataaaccggatgtcctggattgttaccccagctgcagatgaggctaatgcacatgtttgtgaagaaaaggacccagaaaattggcatgtgcaggtataagactttgttttagtcttacatgaactacagtaacatcttagatggtacttcctcatacttattttggtgctcggctaggtgttcaggtcaattgattcaggttctgtaaaggggttcccaaaaattgttcaggaggcagagtctcaggttagtgtcctttgccatgcaccacagcaccagctaaaagtgcatctttcaacaattgtttagttattttcccttttcttctgcagaatcttgtctgtgcaaagaatctaaagatcgacaaaagcatacacagtgcatatgtcaaagcaatcaggtctgcgcagcacttcatatacattgagaaccagtatttcattgggtcatcgttcttatggtcctcacataaaagcgcaggtaaatctgtcttcagttctgctttaggtgaagcttatgaaatgccatttcactacaaatttctttgcttggcaaccaacagttaacatcttgtagttgtagacttgatcagcctaacaatcacatacatgtttatgctatgacttgcgaacagcaattggattgttcagatgcacgatggcaaacgacacattagaacctgaaaatggcataagagatagtaggattagtgtttcagtacctgtcaggctgtttgttactcacatttggtaatgactacaagggcattctgcattcatattacgattggaatgctctggtgagatcaggtgctgataacttaatacctgtggagctggccttgaagattgcaagcaagatcaaggcaaatgagcagttcgcggtgtacattgtcctaccaatgtggcctgaaggcatcccaaccgcggcaccgatgcagcaaatcctcttttggcaggtctgcaggcatttattcatgcaaataactactacctccgtttcaggttataagactttctaacattgcccacattcatatagatgttaatgaatctaggcacacattaacaaatgaatctagacacattcatttgtgcctagattcattaacatctatatgaatgtggacaatactagaaagtcttataatataaaacggaggaagtacaaattaattaagatactgatgttttgatctggtattcttttgaagagccaaacaatgtctatgatgtacaagatcatagcggacgctctgcagatgcagggattggttgaagctcaccctcaagattatctgaatttctactgcctcggcaagcgcgaggtcgccgccggtgacagcatgtcccagacgagcttatgcaatgacaactccactctggtacagtacagcagcaggatactactccgtagtccgtagtaggtaaatgtattactactacgtgtggtgaaatactcgtggctgatcattgttgcaaattaacaatcatgcatccagcgctcggcacagaagctccggagattcatgatctatgtgcactcgaaagggatggtggtggacgacgagtacgtcatcatcggatcggccaacatcaaccagaggtccatggaaggctgcagggacaccgagatcgccatgggcgcctaccagccacactacaagtggtctgctgatcacggccaaggccctcctcgtggacaggtacagttcatccaaagagcttcattacgatcgatgacgagagagagagagatgtgtgtttgcattgcagatgtagagaaacgaggattttcttgctaactccacaaggtgttgaactagccaacctaggttcaaaagcctcaccccttttaattatttgatattaggtagggttcactctatcggttttagcccatttgatcggagttcaccgaaatcccgaaatttcggaaattttggtccgaaattttgaacaaaatttagttgaatttgaacaaatattaccaaaattcacgaaaaaaattaaaaaaatttagccgaagtaatatcgtatcggaggggaccaaaatgaccgaaatttcggttcgaaatttccaactctgatattaggttattcactaatattcacttttttttgcattgcaggtgtacgggtacaggatgtcgctgtgggcggagcaccttggggcggtggaggagtgcttcgggcggccggagacgggggagtgcgtgaggcgggtgagggagatggcggaggagaactggagggcgtacgtgtcgccggagatggaggagacgaaggggcacctgatgtgttacccgttgaaggtggacaaggacggccgcgtccgctctctccccggccacgactgcttccccgacgtcggcggcaaggtcctcggcactcaaacctcgctccccaatgccctcaccacctagtacctgtaccatatcccgcgtgaatatgaatatgaatgaatgccactgttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0840800, RefSeq:Os03g0840800