Os03g0841800

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0841800| Description = Similar to Shaggy-related protein kinase kappa (EC 2.7.1.-) (ASK-kappa) (AtK-1)| Version = NM_001058389.1 GI:11545650...")
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Gene Name

Os03g0841800

Description

Similar to Shaggy-related protein kinase kappa (EC 2.7.1.-) (ASK-kappa) (AtK-1)

Version

NM_001058389.1 GI:115456506 GeneID:4334738

Length

6026 bp

Definition

Oryza sativa Japonica Group Os03g0841800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36236689..36242714

Sequence Coding Region

36237029..36237117,36237450..36237552,36237654..36237737,36238051..36238146,36238233..36238283
,36238352..36238492,36238645..36238701,36239636..36239710,36240802..36241074
,36241155..36241214,36241301..36241393,36241743..36241895

Expression

GEO Profiles:Os03g0841800

Genome Context

<gbrowseImage1> name=NC_008396:36236689..36242714 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36236689..36242714 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctattctggactaaggcatggcggcgttgggagctcctctcggccgggacatggattcaagggcccggctagttcggttgaatgtctaggaagggagatgctggaaatgcaattgagggattccaaaccagatgttggtgatgaaaagaacactgaacgagatgtagtcgacggctctagcgctgaagctggtcacataatagctactacgatccgtggccgaaatggtctacctaaacagtctgtcacttatattgctgagcatgtggtcggaactggttcttttggggttgtatatcaggccaaatgtcgagaaacaggagaaattgttgccattaaaaaggttcttcaagataaacgttacaagaacagggaattgcaaattatgcatatgctggatcatcctaatattgttggtcttaagcattacttcttctcaaccactgaaagggatgaactttacctcaatcttgtccttgagtatgttccagagacagtaaaccgaattgcgagacagtacagcagaatgaatcaacgggtgcccctcatttatgtcaaattatacacttatcagatatgccgagcacttgcttacatacataactgtgttggcatctgccaccgtgatataaaaccacagaatgttcttgttaacccacatacacaccagctcaaaatatgtgattttggcagtgcaaaagttttggtcaaaggagagccaaatatctcctacatatgctcaagatattacagggcaccagagctcatatttggtgcaactgaatatactactgccattgatttgtggtctacaggctgtgtcatggcagagcttctgcttggacagcctctgttccctggggaaagtggagttgatcagctggtcgagattatcaaggttttgggtactccaacaagggaagagatcaagtgcatgaatccgaactacacggagttcaaattccctcaaattaaggctcatccatggcacaaggttttccaaaaaaggcttccacctgaagcagtggaccttgtaagcaggtttctgcaatactcaccaaatcttcggtgcaccgctatggaagcctgcatgcaccctttctttgatgagttgagagatccaaacactcgtctacctaatgggcgtcctcttcctcctctcttcaacttcagaacacaagagctaaatggcatccctccagaagccatcgaacgtctggttcccgagcatgcgagaaggcagagtttgttcatggcgctgcgcacctag</cdnaseq>

Protein Sequence

<aaseq>MAYSGLRHGGVGSSSRPGHGFKGPASSVECLGREMLEMQLRDSK PDVGDEKNTERDVVDGSSAEAGHIIATTIRGRNGLPKQSVTYIAEHVVGTGSFGVVYQ AKCRETGEIVAIKKVLQDKRYKNRELQIMHMLDHPNIVGLKHYFFSTTERDELYLNLV LEYVPETVNRIARQYSRMNQRVPLIYVKLYTYQICRALAYIHNCVGICHRDIKPQNVL VNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDLWSTGCV MAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKV FQKRLPPEAVDLVSRFLQYSPNLRCTAMEACMHPFFDELRDPNTRLPNGRPLPPLFNF RTQELNGIPPEAIERLVPEHARRQSLFMALRT</aaseq>

Gene Sequence

<dnaseqindica>5598..5686#5163..5265#4978..5061#4569..4664#4432..4482#4223..4363#4014..4070#3005..3079#1641..1913#1501..1560#1322..1414#820..972#gcctattcttttttaccagaaaaggaaaagtttggaaggagaagagcagctgccctccactacctcactccactctccccccctacctaacctacttgctccacaccagagagagccccaaaccatctcatctcatcctcttccgattccctgctcgcccataattattccaagagcactggagcctgttgatctgcttgctccaagaatttttctttcatctctgtgggattttggctccaggtactgtggctccagattctttgatcccaccagagagaaaaaaaagggtcgttttttaatgctccttcggacccggtttgcggcggtttggacccaattatcgagttataggatttgggatggatcgcacggtttattttcggaggatctttgggccatttttgagattgatctgttcgggatttagtgcaagttttgcggtttttcttgatgattatttagtggcccttcttgatcgctgtgtggctggaaatccggatgccttttggagtagtgtactaacagacgaattatgtgtttcgtacttgagtgcagtgtacttacttcctgaagattttttggatgttcttcatcagttataaattgatgaagcaacttttacaagaaaaatttcctactatgccatagaaggttcatctcgatcttgacacatttttatggaatgtgtatgcagctgttgctgaagtgatgctggaggaaacggcattgcaatggcgggctgatcttctgcaagcaatggagtgaatactggtctgtttttcttgtcctgacctggggaatctcgggtagtgggggatggcctattctggactaaggcatggcggcgttgggagctcctctcggccgggacatggattcaagggcccggctagttcggttgaatgtctaggaagggagatgctggaaatgcaattgagggattccaaaccagatgttggtgatgaaaaggtaggtttctgttcgtgtttgtttgtcactgagtgaactagtgttgatgtaggatgaagagtcacctgtcaccagaatcaaactcttgtttctgtggttcctgttattttgttcacctcctgtagcaatgagccactgtgcctttctgagaaagtagtaaataatcactgcataacttcaaaaaatttgtctgtaatttgctactctgcaaatttgacatgttgtccaccctagaaaagcatggttttatgacactgcttcatacttctacggctcatgaatattcacagaaagcctacggaaatatgaaccaagactgcactttggtttaccaacaattcatttgcagaacactgaacgagatgtagtcgacggctctagcgctgaagctggtcacataatagctactacgatccgtggccgaaatggtctacctaaacaggtaaaaatagtttcgctttcatccttgcaatttgtgatgtttggccatgaaacaatgctgataaagtggttatggtaatggaacagtctgtcacttatattgctgagcatgtggtcggaactggttcttttggggttgtatatcaggtaagcctgtggctttttcattgtaaaaatttctctatgtgactgtgaaaggcaaataacctgttcgtgtcaactcttaggccaaatgtcgagaaacaggagaaattgttgccattaaaaaggttcttcaagataaacgttacaagaacagggaattgcaaattatgcatatgctggatcatcctaatattgttggtcttaagcattacttcttctcaaccactgaaagggatgaactttacctcaatcttgtccttgagtatgttccagagacagtaaaccgaattgcgagacagtacagcagaatgaatcaacgggtgcccctcatttatgtcaaattatacacttatcaggtcagccctgatttgttgtctatttttctgagtgactcgcctttgcattggaccagtaacctttaggaaataatataattttccatctcatgccccattccaaaccgattgcttctatagattcaagagaataaactctttggatgtccggtcataatctatttttggttatcttattttcgaggaacaagggggcacatttgcaaagttcttaatttttcagctgggttatccagtgccttcgggcatgcatgccacactagagcttatcaatagttgatgcatatttttttcctgtaaaatatcaatggaccatgttcaaccatctgcaagggagcactgagtgccataatttttatgtaatgtaggcattcatgctctcccaatttgtttgcatgttctaaaacctgtcatgtgaagcatggttcaaacttggtggcagtcatgtgttgtccttgtgtccactcgagtattatcttcaagtagcccaggactgcactggaacgtttagaagttttggattaatgattcagattgatttcttccatggagaatcggcatttaaacatctactcaagccagcttgtcaattttcctgacttcatatgtatgttcaacagcttgcttcttgtttgtctagctaaacatcaagcgctatctacttatctaataatttttctgtcatatgatttgagatgatagtgaaatataacatttttcatgagataagtagcacatcattttggccggtaaaaaaattctgagatttgattgcgtgacttcaatctactctctaggaaccagcagagatcatttactgtttaactgaaaattttcacattagtgcatgtaattgtttatatactcttaactaatggttagatttatctatttactccagttagaattctagctaatgagttgttctatacacctgtttgctctctgtagctgttgaaataaattctcccaacatgcactaaaccgtgcttccagttgtatttttctttatgatatcatatcttaagacaaaatttgattatttattaactactaagtcatctaaatcgttgttcctgttgtctttgcagatatgccgagcacttgcttacatacataactgtgttggcatctgccaccgtgatataaaaccacagaatgttcttgtgagattttaacccctttattttctatgcttaatatgttttgctgtacagatcctcaaatataaattaatggggatcatggaaaataaaacataactaattggtacatgaaggagttgcatatatgtaacattgtctacttttaactatatgaaatattcacagcaaactctatatcctgtagagaaggtgcataatgttggtaataaagctttgcatttttatgtatctgcatttccctgaaaatattagtcataattcataaatgaacttgggcaatcttattttctccttttgttccattgagctttcatatgtttactgttgcatatttctgaagagcataaagtatattgctcattgggactgagattctggttcatatgtatccaaatatcttaattattggttggttccacatacatgatataacattctgaaactgaaaaaagcaatccacatgtgcattatttagtttcctatagctgagccatcccatgtgcattgtttggtgccaatgctacatgttatcaacttatcatattatcaaactgtatgttactgtttatattgttttgcttgttgatgatattggctgatggaagagcactttggttatacatagtcatttttgttctttattgaaagagaaaatatccatggctccacatatttggattgcatcaactaccactaggtccactactaggactatgatgccaaattatttgacatatagaacagcaggatttaagattaagtctcatatataagattattaaaacggtataaactgcacatataaaggaacatttatgcagacaaactgttagtacttcaattatttattttaaaaccgtgatcatgcatgtacttacagactgaaattcactaagttttgatggtactaataaggtcttccttcgcactgtaggttaacccacatacacaccagctcaaaatatgtgattttggcagtgcaaaagttttggtaagttctgaatttggcagaaatttaaattcacaagcatttctgttttctgaatggacacactgggttttcttgcaaggaaatgtgaacttaggcaggtagcctacacatgatagtcttaaattgcagctttttccccgccgaatgtgcaggtcaaaggagagccaaatatctcctacatatgctcaagatattacagggcaccagagctcatatttggtgcaactgaatatactactgccattgatttgtggtctacaggctgtgtcatggcagagcttctgcttggacaggtttcattcatgcatacaatattttgcttttgttcaatttcttattctaataacattcatccatgcagcctctgttccctggggaaagtggagttgatcagctggtcgagattatcaaggtaacatttttctatgatgtcctaaactgttctctcctgtgaccattgatcttgacaataacatgtttagtcatagcgccttgcaggttttgggtactccaacaagggaagagatcaagtgcatgaatccgaactacacggagttcaaattccctcaaattaaggctcatccatggcacaaggtattctgcccatccttgacaaaactaatgcaatatcgatgtccgatttggtacatacttttgggacagggagatcttttaacgcaaattactatgctgttaaattttgaaatatttgttgaagacaaaaaggattaaaaaccaaatggaaaagaaatccaatttctgtgttaccatttgcgcttcgacattcctattagttgggtcctgcgtgtgtgagcaatgtccatattatgtgtgtgttcaattggaaaattaaacaatactttctcactgttctttttgtaactcaaaagttttgttttttacccaggttttccaaaaaaggcttccacctgaagcagtggaccttgtaagcaggtttctgcaatactcaccaaatcttcggtgcaccgctgtaaggccacatgagattttggttgttatgatggcctgagcagcctgatgtggtatactgttagatttctctctcatctaacctatttaattattctccagatggaagcctgcatgcaccctttctttgatgagttgagagatccaaacactcgtctacctaatgggcgtcctcttcctcctctcttcaacttcagaacacaaggtatcatagctgaatgaaacagcgataacagcatatgaaccttagcatttgctgatttgattctcatcaacctaaacattcctaaatctctctgcctcgtctaacacctcatgtagacagtatttatgtgagctgagagaattatttcatgaattatgttcaaaatggtacctagcatttaggtgaacaaactgaagccaatgctcgatcttccacttcccgaaatggcagaattgttccgttaattgtttgttcgcctcaatgtcaaaatgaatcctgctgctttgaatttatcctcagctaaactgatacaacatttgcaacattggcagagctaaatggcatccctccagaagccatcgaacgtctggttcccgagcatgcgagaaggcagagtttgttcatggcgctgcgcacctagttctctagctcttcttttttcgcagtttttcttcctgagggaagctctgtaaaggtgtagtggcttctatgtgcccatctcagtgtggataaggtctttggctagagttgttgttgttgttgttcatggcaggatgtgatgtgagtgaggttggagaagaagaggcttgtgctttggtgtgcttgtgcagttggtttgaggttggaatctatgcttcagggttccaggctgtgtaactcctccagttctctttggactttggtttgaagattgtgtgcagtaacagtgcttggttcaacttcagttcagagtggtctggtgatgataaagaaaatcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0841800, RefSeq:Os03g0841800