Os03g0843600

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0843600| Description = Protein of unknown function DUF1012 family protein| Version = NM_001058400.1 GI:115456528 GeneID:4334751| Length = 6...")
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Gene Name

Os03g0843600

Description

Protein of unknown function DUF1012 family protein

Version

NM_001058400.1 GI:115456528 GeneID:4334751

Length

6964 bp

Definition

Oryza sativa Japonica Group Os03g0843600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36304155..36311118

Sequence Coding Region

36304205..36304630,36304714..36304785,36304852..36305466,36305800..36305982,36306151..36306210
,36306280..36306483,36307044..36307292,36308307..36308405,36309215..36309409
,36309528..36309620,36309812..36310078,36310431..36310649

Expression

GEO Profiles:Os03g0843600

Genome Context

<gbrowseImage1> name=NC_008396:36304155..36311118 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36304155..36311118 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccctggaccccgactcctcgccggcgccgccgcaccgggactggttcttcccgccggcgccgcccttcctcccgtcctccagagcccgaacgccgagggcccccttcccctccacctcccgctcctccaatccatactccttcccggaccgccggccgcctcctaccccgcgctcccgctcccgctcccccctcccgccgccggagcagcagaagcagcagcagccgcccccgacgacgcctcctcccgccccgcgccgtcgcgacccccggtatgctggcgtccgccgtggcgatgtccgaacgctcaccgccgagaaagcggcggcggcggcggcggttcctacggccgcgcaggtgcacgggagcaagtcagcggcgtcggcgaccaccctccgatggtcagggatggtatccgtggcggctattgtgctctgcttctcttcccttgtccgcagtaactcctcgctacatgatcaggtccaccatttgaaggctcagcttgcggaagctactacaaaattgcagtcttgtattacagagtcctcgatggatatgagtagcatattatcatatcagagcaataacagtacttcgcagaacagaggtcttaagaatttctcattgctgctctcgctttctacgctgtacgccccattactcattcttaagtacatggaccttttcttaaagctgaggagttcgcaagactccgaagaagaagttcccataaacaagcggttggcataccgagttgatatatttttatcacttcaaccatatgctaaacccttggttctacttgttgctacattgttacttattggtcttggtggcctggctctttatggtgtaaatgatgatagccttttagattgcctctggctgtcctggacctttgttgctgattcgggcaaccatgcaaacgcagaaggctttggaccaaagttagtttcagtttcaattagtatcggtgggatgctggtttttgccatgatgcttgggcttgtaacagattcgatctctgagaagtttgattcactgaggaaaggaagaagtgaggtcatagagcaaagccacacgctggtccttgggtggagtgacaaactgggatcattgctgaaccaaattgctattgctaatgaaagtttgggaggaggaaccattgtagtgatggctgagaaagacaaagaggaaatggaagcagacattgctaaaatggagtttgacttgaaaggaacagctataatttgtagaagtggaagccctctgattctagctgacttgaaaaaggtctcagtttctaaagcgcgtgcaattgtggttttagctgaagaaggaaatgctgaccagagtgacgcacgcgcattgcgaacagtcttgagtttaactggggtcaaagaagggctaagaggtcacatagttgttgagcttagcgaccttgacaatgaggttctagtcaaacttgttggtggagaccttgtggaaactgttgttgcacatgatgtgataggtcgtttgatgatacaatgtgcacgtcagccaggccttgctcagatatgggaagatatccttggcttcgaaaactgtgagttctatattaaaagatggcctcagttggatggtatgcaatttgaagatgtgctcattagctttcctgatgccattccatgtggcataaaggtggcatcttatggtggcaagattattttaaatccggatgacttttatgtcttgcaagagggtgatgaggtgctagtaattgcagaagatgatgacacatatgccccagcgccattacccaaggttatgagaggttacctacctaaagattttgttgttcccaagtctcctgaaagaatattgttttgtggttggcggcgtgatatggaagatatgataatggtactcgatgcttttctagcgccagggtcagagttgtggatgttcaatgacgttcctgagatggacagagaaagaaagctgatagacggaggcctggacttcagtcgtctagaaaatattactttggttcaccgtgaaggaaatgctgttattcgccgtcacttggagagcctccctttagaatcatttgattctatactgattctggcagatgaatctgttgaggattcagcaatccaagctgattcaaggtcgcttgcaacactactgctgatcagggatatccaggcaaagcgacttccattcagggaggcgatggtttcacatgttactcgaggaagcttctgtgaaggttcttggattggggagatgcaacaagcatctgataaatctgtcataatcagtgagattctggatcctaggacaaaaaatttattgtcagtgtcaaaaatcagtgactatgttctatcaaatgaactagtgagcatggcattggcaatggttgctgaagatagacaaataaatgatgtcttggaggagctatttgcggagcaggggaacgagatgcaaatacgaccagctgatctctaccttcgagaagatgaggagttaaatttctttgaggtcatgctacgtggtaggcagagaaaagagattgtcattggctaccgtcttgtggatgctgaacgcgccataatcaatccaccagacaaagtttcaaggcggagatggtcggccaaagatgtttttgttgtaattaccgagaaagaatga</cdnaseq>

Protein Sequence

<aaseq>MPLDPDSSPAPPHRDWFFPPAPPFLPSSRARTPRAPFPSTSRSS NPYSFPDRRPPPTPRSRSRSPLPPPEQQKQQQPPPTTPPPAPRRRDPRYAGVRRGDVR TLTAEKAAAAAAVPTAAQVHGSKSAASATTLRWSGMVSVAAIVLCFSSLVRSNSSLHD QVHHLKAQLAEATTKLQSCITESSMDMSSILSYQSNNSTSQNRGLKNFSLLLSLSTLY APLLILKYMDLFLKLRSSQDSEEEVPINKRLAYRVDIFLSLQPYAKPLVLLVATLLLI GLGGLALYGVNDDSLLDCLWLSWTFVADSGNHANAEGFGPKLVSVSISIGGMLVFAMM LGLVTDSISEKFDSLRKGRSEVIEQSHTLVLGWSDKLGSLLNQIAIANESLGGGTIVV MAEKDKEEMEADIAKMEFDLKGTAIICRSGSPLILADLKKVSVSKARAIVVLAEEGNA DQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRL MIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGIKVASY GGKIILNPDDFYVLQEGDEVLVIAEDDDTYAPAPLPKVMRGYLPKDFVVPKSPERILF CGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEMDRERKLIDGGLDFSRLENITLVHRE GNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPFRE AMVSHVTRGSFCEGSWIGEMQQASDKSVIISEILDPRTKNLLSVSKISDYVLSNELVS MALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEELNFFEVMLRGRQRKEIV IGYRLVDAERAIINPPDKVSRRRWSAKDVFVVITEKE</aaseq>

Gene Sequence

<dnaseqindica>51..476#560..631#698..1312#1646..1828#1997..2056#2126..2329#2890..3138#4153..4251#5061..5255#5374..5466#5658..5924#6277..6495#actcgtcagaagcatccgccgcctacctgccaacccctagaattccgaaaatgcccctggaccccgactcctcgccggcgccgccgcaccgggactggttcttcccgccggcgccgcccttcctcccgtcctccagagcccgaacgccgagggcccccttcccctccacctcccgctcctccaatccatactccttcccggaccgccggccgcctcctaccccgcgctcccgctcccgctcccccctcccgccgccggagcagcagaagcagcagcagccgcccccgacgacgcctcctcccgccccgcgccgtcgcgacccccggtatgctggcgtccgccgtggcgatgtccgaacgctcaccgccgagaaagcggcggcggcggcggcggttcctacggccgcgcaggtgcacgggagcaagtcagcggcgtcggcgaccaccctccgatggtcagggatggtatccgtggcggtaagaaatgggtgagctcgcggggttttcgcgtttgacttttgttgactgacggtttaaccgcgtaaacctgatgcttgcaggctattgtgctctgcttctcttcccttgtccgcagtaactcctcgctacatgatcaggtccaccatttgaaggtaaaattccaactgattccaatgcacattctgcataactgcgcacttatacgcggattctatcaggctcagcttgcggaagctactacaaaattgcagtcttgtattacagagtcctcgatggatatgagtagcatattatcatatcagagcaataacagtacttcgcagaacagaggtcttaagaatttctcattgctgctctcgctttctacgctgtacgccccattactcattcttaagtacatggaccttttcttaaagctgaggagttcgcaagactccgaagaagaagttcccataaacaagcggttggcataccgagttgatatatttttatcacttcaaccatatgctaaacccttggttctacttgttgctacattgttacttattggtcttggtggcctggctctttatggtgtaaatgatgatagccttttagattgcctctggctgtcctggacctttgttgctgattcgggcaaccatgcaaacgcagaaggctttggaccaaagttagtttcagtttcaattagtatcggtgggatgctggtttttgccatgatgcttgggcttgtaacagattcgatctctgagaagtttgattcactgaggaaaggaagaagtgaggtcatagagcaaagccacacgctggtccttgggtggagtgacaaactggtaatcctgcattcaatcctgctaatctttatcgcaaaattccatatttctacctacctgtcctgttatgttccttgttgtttgggaatgatgttataccaatagctattaaatatagctctaactagggacgtcattgcaactgttacattgctttttattgcatagcagtctcgctacaaaagtaaagtagttagtgaattctggtatttagtttaaatatgcaaatttcttatatatctgtttctgcagatcaactgatctgagcacaagctgttcctctccagattactgtagtctaagtgtctaacctatttccttttgtggcaacagggatcattgctgaaccaaattgctattgctaatgaaagtttgggaggaggaaccattgtagtgatggctgagaaagacaaagaggaaatggaagcagacattgctaaaatggagtttgacttgaaaggaacagctataatttgtagaagtggaagccctctgattctagctgacttgaaaaaggtaaacattgtgatgtagtgattctgctaacccgcattatgatctgttggcacttggcagtaatcaatagacaattggatggttgttatgttaatttaatgactcactattactttactaaatctatatgcaactctttgttgaactgaatctgccttcatgtacaaggtctcagtttctaaagcgcgtgcaattgtggttttagctgaagaaggaaatgctgaccaggtacattgtgctagttaatttgtattattatacatgacgctttagcttacaccattgcctcttttctagagtgacgcacgcgcattgcgaacagtcttgagtttaactggggtcaaagaagggctaagaggtcacatagttgttgagcttagcgaccttgacaatgaggttctagtcaaacttgttggtggagaccttgtggaaactgttgttgcacatgatgtgataggtcgtttgatgatacaatgtgcacgtcagccaggccttgctcaggtttctttctaatcaacagtaatttctgaacaaagttattttttgatgacacaagttctttctggataatagatacttcttcaagggaaactcatactgaacatcctgatttgattccacttattgtctgtattatggaatctcatgtcatgtgcatccagaaaacctattttagtacaaagtctgattactttttgaaactttttacacacttgtatttttcgcttgattgtggatgtaaatatgctactatgttgaccacttgacccaatttaaatcactttatagttatgctcttgtttgcactgccactaattgacttagtattttatctacttctgtggttctttttagcctggcacggcataattcttaagaaactagcctatcttcttgttctacatgcgcaataattcactcttaaatatttcctgcatgtacataatgcttactataattacctggctgtttgagtattgcatatagtctactacatgcacagccttcctatttactaatttaatgtgtccctttaaatactaatggagttgcataaacagatatgggaagatatccttggcttcgaaaactgtgagttctatattaaaagatggcctcagttggatggtatgcaatttgaagatgtgctcattagctttcctgatgccattccatgtggcataaaggtggcatcttatggtggcaagattattttaaatccggatgacttttatgtcttgcaagagggtgatgaggtgctagtaattgcagaagatgatgacacatatgccccagcgccattacccaaggtaaccattaatctgtaagaacaaaattatctgaaactttctgttctttttatatcatctatcaggacttttttttgtatcccttctggctctgtaacattaatattgaattactgttgttagtcatgccatgtttacatatttaactattttctgtacagctccttagatatcttattatcggtgcctgtcagcctgtgcattgctagtctacttgttgcatttcatgaagtatactcatcttggttgacgttgtttttaagctcattgctatttcctctcatttaccatttggcatcttttattgatatatttatctgaatcactagccatatcctatttacaacttactgcatcaacctaattgcttcaaaactctgtagtatttcacacgagttcttccaatggtgtcttatgcgaattcttctccttgtaatattgttaggctcttgagatccataagtgcagacaaccgcatggttgtcaatagaattttagcttctgcccaactggaactagattgcttttgcacaattcaaaagtaatttctcctgctttgctcattaagcaccggaaaagacaactgcatgagtcaatttatgccttatagatggcaattactccctccattccagaatataacaacttttagctatgaatctggactagtgcatgtccagatttgtagctaaaagttgctatattttgggatggtggtagtattagcctttgttgttacttgctaaaagcctaaaactacaaaagctagctaacttactaggaaagttctaacatagatactgcacatatatagagcatcctgtaacgaagcttacaaaagcgaagtcaattttattattcaggttaaagaagctgtttacatagacattgttcaccccgaaagaaatcctcagaagattcttctttgtggatggcgacgggatatagatgatatgattgtggtaagcctttcgttgaagctcctaatattcctttttctgtaaaactctgcaggttatgagaggttacctacctaaagattttgttgttcccaagtctcctgaaagaatattgttttgtggttggcggcgtgatatggaagatatgataatggtaacttgatgatagatcgaaaacaacattttgtgtcctctattggaatataatattcctattgctatggtagtactaaaggttttggagccaaaatttgcctgtgtcaaaactatgaaaagatataatatcccttcctgttctgagctttacttatttctaattactgccacggcagcatggttgatggaacaagccaatgtgccattaagtgcttagtgttttggaaaacagacctgatatttcttatttttgccctgtgttttatctttctcagtgtttttatcccactgtggtgctgtccaatttttgtagtgactagtgagtttgtactggcatttggccttttgtttcttcacatgatcagatccatggttagctctaatatcatgagcaactatagtgtgttttgcatgatttccccatgagttaatactgtagtttgatacatatgttgaaatggttgcattaacttaaacatctataatcatatgctgtgcttggcttctccaattgtcatacatttctttttatatttttgcatttagtataataaaaaatatattcaaacccttttgtactgaatgtccatcaaaaaatgcaggcctgtccatttgaaaatgtaagtactatgagaattttgtttatatatgctcattttttttcttaaaaaaaagagttatgtttatatagcaacatatgattaccaaatgatgtacgttgcagtgcatgattttttgttttgatgaatggataatgcatttaattacgatctagagcaacagtgtgacttggttttaggtattcaggtactcgatgcttttctagcgccagggtcagagttgtggatgttcaatgacgttcctgagatggacagagaaagaaagctgatagacggaggcctggacttcagtcgtctagaaaatattactttggttcaccgtgaaggaaatgctgttattcgccgtcacttggagagcctccctttagaatcatttgattctgtaagttctgagaacatagactgtagttcctttaggaaaaaagcagtactgttgaaccttcctatgagtacaattgcttgcttctttcctccggctgatgcttatatgcaacacacagatactgattctggcagatgaatctgttgaggattcagcaatccaagctgattcaaggtcgcttgcaacactactgctgatcagggatatccaggttctctctagccatggggaactaatttaaactgttgttcaattttggattttacttaggattgctttagatcatatctctgatcacatgcagttgtcttcgatcatgtactatttttcatttctcaagcctacattagaatattttgcatttaaacaaagatagttggctcacacctttaactactgcaggcaaagcgacttccattcagggaggcgatggtttcacatgttactcgaggaagcttctgtgaaggttcttggattggggagatgcaacaagcatctgataaatctgtcataatcagtgagattctggatcctaggacaaaaaatttattgtcagtgtcaaaaatcagtgactatgttctatcaaatgaactagtgagcatggcattggcaatggttgctgaagatagacaaataaatgatgtcttggaggagctatttgcggagcaggtatgattctcagagctgatggctccatcgtctattgtatgaactagagttgctcctaaaaaggctataacaatctgatcacatgtttcctcacaaacatatatgcaaatgatgttgaagttgtcatcatttaataatattttatcggagcatctgattttaaaataaatactaggggtctgaacctggcactacgatagggaattccattgactttacctgttggctatagagacgttatcgtgcaaagatgttgtgttgggttttctctcgtccaaatgtctgttgtcagacatgttctctggtttctggctgaccaatgtccaagttggcatctgaactttccttgcaggggaacgagatgcaaatacgaccagctgatctctaccttcgagaagatgaggagttaaatttctttgaggtcatgctacgtggtaggcagagaaaagagattgtcattggctaccgtcttgtggatgctgaacgcgccataatcaatccaccagacaaagtttcaaggcggagatggtcggccaaagatgtttttgttgtaattaccgagaaagaatgagttacatcatttagcaaaccatgagaaatcaccactagtaaggcaaaattgacagcagtgcacgtaagagatcaacacgagcagacgactgttgcattgcagaattgacatccggaagaaggccaagcactaactgcgtcagcgcgagagagcaatgcataaccagattttgggatcaatctcgggctatgacttgccaattgcaatgtacataagtgcggaatgatccatgccattgcgcagaaaggatgagaagagaaacaccaagcacgatttgcttagatcagttttgtttttttagagaggggcttcgatcctgtttattgtatagtattacatcttttttgtgtactctgttagaaacttccaaatactccgttggctccgattgctgtacacgcgaacaacaaattcgtatcttacactaatgtatgacaaaagatggcaaagtaacctggtacaattggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0843600, RefSeq:Os03g0843600