Os03g0847600

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Revision as of 13:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0847600| Description = Similar to GAMYB-binding protein| Version = NM_001058421.1 GI:115456570 GeneID:4334774| Length = 5032 bp| Definitio...")
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Gene Name

Os03g0847600

Description

Similar to GAMYB-binding protein

Version

NM_001058421.1 GI:115456570 GeneID:4334774

Length

5032 bp

Definition

Oryza sativa Japonica Group Os03g0847600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36484399..36489430

Sequence Coding Region

36485251..36485258,36485339..36485417,36485675..36485743,36485826..36485915,36486260..36486398
,36486484..36486586,36486671..36486723,36486869..36486935,36487448..36487556
,36487635..36487700,36488013..36488081,36488162..36488219,36488320..36488424
,36488509..36488543,36488632..36488677,36488829..36488913,36489004..36489124

Expression

GEO Profiles:Os03g0847600

Genome Context

<gbrowseImage1> name=NC_008396:36484399..36489430 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36484399..36489430 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaaggtacaaagtgataagggagataggcgatggcacctgtgggaatgtttttagggcttataacactgaaacaaatgaaattgttgcagttaaaaaaatgaagaggaagtttttccaatgggaagagtgcattagtctgcgagaggtgaaggcacttcaaaaactgaatcatcccaacattgtgaagttaaaggaggtgactatggaaaatcacgagttgttcttcatttttgaaaacatggaatgcaatttgtatgatgtcataagagaaaggcaagctgctttctcagaagaggagatacggaactttatggtgcagatactgcaaggtcttgcatatatgcataacaacggttatttccatcgtgacctgaaacctgaaaatctgttggtgacagatggcactgttaaaattgctgactttgggttggcaagagaagtatcttccagtcctccttatactgactatgtttccaccagatggtatcgagctccagaggtgctgctacaatcgtcagcttacacacctgctattgatatgtgggctgttggtgcaattttggctgagcttttcacactgtctccacttttccctggtggaagcgagactgatcagctatacaaaatatgtgctgtgcttgggacaccggatcatactgtctggccagagggaatgaacctgcctcgttcaagcagctttaattttttccagatcccaccaagaaatctatgggagcttattcctaatgctactttggaagctatcgacttgattcagcaactttgttcctgggatccacgaagaaggccaactgctgagcaatcactacagcatccgttctttaatgtgggcaactgggtaccaaggccactccatgcctctcacacaaagacaattgaaactagaccgaatccaaggttggaactgaacctgtgggattttggtacagaacctgaggacaactaccttgatttaactctgagtctaaagccaagttttcctggaacagatttttctaacaatgttccagagcatacaaaagaggaaattctgctgtacccaggatttgaaaatcctcctgtgcagtcagggttttggcctctcgttgcatcagaccggccaatgggcgatgttccagccatgtcatcctggccacaggcatatgtggttgacggccaagccacacttccagctgttggattctctggttctccattcggtttgtcccccttacaaccaaatctgtttgagaaccgttcgttcgcaacacccatccggcaggtcaatttcttctga</cdnaseq>

Protein Sequence

<aaseq>MERYKVIREIGDGTCGNVFRAYNTETNEIVAVKKMKRKFFQWEE CISLREVKALQKLNHPNIVKLKEVTMENHELFFIFENMECNLYDVIRERQAAFSEEEI RNFMVQILQGLAYMHNNGYFHRDLKPENLLVTDGTVKIADFGLAREVSSSPPYTDYVS TRWYRAPEVLLQSSAYTPAIDMWAVGAILAELFTLSPLFPGGSETDQLYKICAVLGTP DHTVWPEGMNLPRSSSFNFFQIPPRNLWELIPNATLEAIDLIQQLCSWDPRRRPTAEQ SLQHPFFNVGNWVPRPLHASHTKTIETRPNPRLELNLWDFGTEPEDNYLDLTLSLKPS FPGTDFSNNVPEHTKEEILLYPGFENPPVQSGFWPLVASDRPMGDVPAMSSWPQAYVV DGQATLPAVGFSGSPFGLSPLQPNLFENRSFATPIRQVNFF</aaseq>

Gene Sequence

<dnaseqindica>853..860#941..1019#1277..1345#1428..1517#1862..2000#2086..2188#2273..2325#2471..2537#3050..3158#3237..3302#3615..3683#3764..3821#3922..4026#4111..4145#4234..4279#4431..4515#4606..4726#cgttttttcccccaatttctcgtctccccccttcctccaatatatcggcggcgatcccggctcgaggagaggaggctccgccgcgattttttcggtgtcgcatcgaaattatggtgagttggtttcctccctccccctaattcccgatccgcaattcgattgcgatctccattgcttgggttctgccttttttgggggaatattttgggcgatatcggcgaatatatgctgggctctcgcgcgattcctttttgattatggtggttggtgttcggtgcgttttggttgaggaattttggctctaattcggtgccattaggtgggtttgtgtttaatttggggatgtttctgaattgtttccgtgcgtttcagattggggaatgctgtgtttcgccgagattttctcatcttccatatgtgatatcagattataattgtatgtgtttttgtttcgctgcaaattaattatattgatgcgaagtttctctgcatttgattgcagattttcgatgcattttaggctaaaagtgctcgggtctgaaacctacgtgcttttcttgtcgccgaagatggtgtcagcaaatatacatcgacgcacatgaacagcgatgatgcgttgctgaatccgtctgaagctgcaataagcatgacggttttgcaaattatgatactaaaccattcatgctgctacgccctcgtctggaactttcttcttctgatgcaaccgtgcacaagcaaacctagcctcgaagcgattgtgatgagttttagaggtggtgcgggttcgatcacgtggagttctattggtgttcagtgactcttggcaaaagttctcttgtaaaatcgacgacgatggaaaggtcagcagtaattatctcgcgaatcatattatttgttgcgtgcgcactaatttctgacatggcatctaatttcttctcaggtacaaagtgataagggagataggcgatggcacctgtgggaatgtttttagggcttataacactgaaacaaatgaaattgtaagtgcagctcttggcatagtacatatggttacttggatcttttcatgttaattcagttgccttctgctccttatatctactaacctataaaggaacgaacagtattatttgttgcacctaatcacctatgaatttcccacttgagggaaatgctagcaataatcatcttctacatcaccccagatggctacctattcgagcttgcaccttgtttgttggcttattatgttaacatttccccgaatactgtgcaggttgcagttaaaaaaatgaagaggaagtttttccaatgggaagagtgcattagtctgcgagaggtgaaggtaatatatctcatgtgttatcaaatgaatacaaatttgttttcaaatctgtgtgcttaaaaggagaaccatccttctgcaggcacttcaaaaactgaatcatcccaacattgtgaagttaaaggaggtgactatggaaaatcacgagttgttcttcatttttgaaaacatggttggtctcaagtcattcttggcatacttttttactactttctttatgagcaggaaaaaaaagaggaaaggctaaactattactagcccatatcgctatgatcttctagagttttgtggccagttccattaaaaatactggcatgaatattctatcgtctacaaattacgtgtatatcttgcggttctaatgattatagttctatagtttgtatgcctgttgcatttgttgtgacattacattacgtgtatatctgctgaatcttttggttcacacttctctcacctggagctgttaaatatttagcttttcacttactctggtatcattgtttcttttcacaggaatgcaatttgtatgatgtcataagagaaaggcaagctgctttctcagaagaggagatacggaactttatggtgcagatactgcaaggtcttgcatatatgcataacaacggttatttccatcgtgacctgaaacctggtatacctttcgactatattctgttgaagttataggctgtctatataccctagaagttaattagccttctctctttcctctttagaaaatctgttggtgacagatggcactgttaaaattgctgactttgggttggcaagagaagtatcttccagtcctccttatactgactatgtttccaccagatggtgagtttgtgtttcaaatttatctctgtataaccagtgaatatgtatacaccactttatccaaattattgtgaaatggtgaaggtatcgagctccagaggtgctgctacaatcgtcagcttacacacctgctattggtgatgcctattatcccagcccctgcattttactacttccatttttattaatgccagctcaacatgaaatttgagtttgtgcatataaaactcgcattgcatgaaactactgaattatataactgatagatgtgcacttcctcagatatgtgggctgttggtgcaattttggctgagcttttcacactgtctccacttttccctggtggaaggtatgtatgatactgttgtttgggtaccatgattatgttgcctctgtagttggtaatatccataatttactgtattcatgtattgatgcatatatgctgtctgcttacgcatgttttgatttgagcagtcaacagatcacccttttgatttctgttgaagtgaactcttgtttcttcttttggtgattagttgtgttctttttattttgtggatagttggcctgggaattttggggatttcatgccactatctctgagttgcatttattaattccaaggctgtaaaattattgttgttctgaatactgtaacaacaatattttttccctcatgttagtatttttagctcttatgatgcctatgttgttttcttatacgattaagcctatacttctccatactttttcttaagcccagttcatcttgcacagagtagacctagaccatttgtacttatatttccttgtttatggtgattctgctttgcttttaattattttatttgcttacagcgagactgatcagctatacaaaatatgtgctgtgcttgggacaccggatcatactgtctggccagagggaatgaacctgcctcgttcaagcagctttaattttttccaggtgaaattacttctgtctacaaccattaggataagttgcctttgacactgatttccttttcttttgcttgttcaaaagatcccaccaagaaatctatgggagcttattcctaatgctactttggaagctatcgacttgattcaggttagttatgacacatgagtcttgtttcttacatgtttgatttatatattgttatatgaaccccatgtttttttgtccagttgcttatgtaagtactaacatcaagttaattaatataacatcttacttatatattatattgttttaagtaatttaccatgacaattcacaataaattgcactaattactagtttgtaaatagtgtaaggtatgggtttgtaacatgttgatgatatagcttttgttgcttgatgttatttgtctgagaataatgctctatattaacatggtagtatttgtcattctgacagcaactttgttcctgggatccacgaagaaggccaactgctgagcaatcactacagcatccgttctttaatgtactaatttacacattgagttattcatgggaactatacttcgcttttctttatgtacctaagacttttgagttgtctaggtgggcaactgggtaccaaggccactccatgcctctcacacaaagacaattgaaactagtgagtttctcccctttttctttcaggaaatgataatttatgtattctgttttggtgatttgttgttgtttctcctattgaactccttttatttttgtaggaccgaatccaaggttggaactgaacctgtgggattttggtacagaacctgaggacaactaccttgatttaactctgagtctaaagccaagttttcctggaacaggtgcctaacataatttttcctttgaaattccttccggttattatcttttgttttattggcttatatttccttttctgcttgtagatttttctaacaatgttccagagcatacaaaagaggtgagattttatttgcatgacgtgggaacatatatttgcatgagagtggaatgggtgttatcctgaagttcgctatcatatcatgcaggaaattctgctgtacccaggatttgaaaatcctcctgtgcagtcaggtccgttctttgtctctctgccctcctccatttttgacttatagttcaggactgtatttgcttgcttttttgcgccaacagccagatggttatagatttaattgagatgcgtggtgctcaaacatggcttcctttttacattatttagcagggttttggcctctcgttgcatcagaccggccaatgggcgatgttccagccatgtcatcctggccacaggcatatgtggttgacgggtaagcatcagcatgtcctttacgaatgagttaatctcccaaagccagacttttatatccgctaagtgctatcattattctgtacttcagccaagccacacttccagctgttggattctctggttctccattcggtttgtcccccttacaaccaaatctgtttgagaaccgttcgttcgcaacacccatccggcaggtcaatttcttctgaggggatacaattaacagattgagcactgaaactatttttcagtccatacattcaacttgttcctttatacattgaactcaaataaacgggggcggcagatgaaatgtatataatcgtagcttgtttcctttttcttttctccccatctaaattcccctcacggagtaccctataatgtcagattctatatttatctagattgtgaatatgtgactttccaaaacagttttgtacgtcgatttgtcaaatgataacagcaagtatggatgagcgataactgacgatttgtgaagctgtttttgtatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0847600, RefSeq:Os03g0847600