Os10g0374666

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0374666| Description = Protein kinase-like domain containing protein| Version = NM_001189193.1 GI:297727516 GeneID:9268377| Length = 4495 b...")
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Gene Name

Os10g0374666

Description

Protein kinase-like domain containing protein

Version

NM_001189193.1 GI:297727516 GeneID:9268377

Length

4495 bp

Definition

Oryza sativa Japonica Group Os10g0374666, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12135982..12140476

Sequence Coding Region

12135982..12136108,12136176..12136225,12137176..12140041,12140118..12140476

Expression

GEO Profiles:Os10g0374666

Genome Context

<gbrowseImage1> name=NC_008403:12135982..12140476 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12135982..12140476 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatccatgtccggcaccatcatttaaggagagcactgtccaatagaagctgtccatatataccatcagacattcagagtttcagacggcacaagttttcattccatatcatcaggagaacttcagaaagtaacatcatgcatgatctagggcataatgatctcctgttgaacctgctgccagaaaagtgcttcaaaatgtttactgccctaaaattgcttctcttgccatatctgctcctactggcatcagcttcatgtactcaaggattgcctttcagcaataacactgatctggatgccttgctaggattcaaggcaggtctaagccatcagtcagatgcactggcttcatggaacacaacaacaagctactgtcagtggtctggtgtcatctgcagtcataggcataagcaaagggtattagcactgaatctcacctcgactgggctccatggctacatatccgcttccattgggaatctcacatatttgagaagtctagatcttagttgcaatcaactttatggtgaaatccctttgacgattggttggctgtcgaagttgtcatatctcgacttgtcaaacaattcattccaaggtgaaattcctaggacaattggccagctaccacagttatcctacctgtacctgtcaaacaattcacttcaaggcgagatcactgatgaactaaggaactgcactaaccttgctagcatcaaacttgacttaaacagcctgaacggaaaaatccctgattggtttggaggttttctgaagctcaattccatttcagtagggaagaacatcttcaccgggatcatcccgcaatcacttggcaacctctcggcgctgtcggaacttttcctcaatgagaatcacctcactggaccaatccctgaggcccttggcaagatcagcagtcttgagaggttggcactgcaagtaaatcatctgtcaggcaccatcccaagaacactcctcaacctttcctcgctgatccacattggcctgcaggagaatgagttgcatggaagattgccttctgatttgggcaatggcctaccaaaaatccaatacttcatcgttgccttgaaccatttcacaggaagcatcccaccttcaatagcaaatgcaaccaacatgcgctccatagacctctcttctaacaacttcactggaatcatacctccggagattggaatgctctgcctgaaatacctgatgctgcaaagaaaccagctgaaggcaaccagtgtcaaggactggaggttcatcacgttcttgacaaattgcacaagacttcgtgctgtgacaatacaaaacaacaggcttggtggagcactgccaaactctatcaccaacctatcagcacagctcgaactcctggatatcggatttaacaaaatttcaggtaaaataccagatggtattaacaacttcctcaaactaattaagttgggtctctctaacaatcgtttcagtggtccgatacctgacagcataggaaggcttgaaacactgcagtacttgacactagaaaataacctattgtctgggatcataccatcctcactcggaaacttaacgcaactgcagcaactctctctagataacaatagcttggaggggccattgccagcaagcattgggaacctgcaacaacttatcatcgcaaccttttcaaacaataaacttagagatcaattacctggagatatttttaatcttccatccttgtcgtacattctggatctgtcaaggaatcattttagcggttctcttccatcagcagtaggtggtctcacaaaacttacatacttatacatgtacagtaacaacttttctgggttgctaccaaatagtctcagcaactgtcagagcttgatggaacttcatttggacgataacttctttaatggtaccattcctgtatcagtgagcaaaatgcgaggattagtactgctaaatttgaccaaaaatagccttcttggtgcaattcctcaggacttaagactcatggatggactgaaagagctatatctttcacacaataatctatctgcacaaatcccagagaacatggaaaacatgacatcattatattggcttgacatatcctttaataaccttgatggccaagtcccagcacatggagtgtttgccaatttgacaggatttaagacaggatttaagtttgatgggaatgataagctttgtggtggtatacgtgagcttcatttgccttcatgcccaaccaaacccatggaacatagtcgaagtatacttctagtcactcaaaaagtggttattccgactgctgttacaatctttgtgtgctttatcctggcagctgttgtcttctctatacggaagaaactaagaccttcatccatgcgaacaacggtagcacctctgccagatggcatgtatcctcgagtatcctattatgaactgtttcaatcaacgaatggcttcaatgtcaacaatttggttggcactggacggtatggatctgtttataaggggacaatgctgctcaaaaagtcggaaactactgtagctatcaaggttttcaatcttgaacaatctggttcttccaaaagttttgtggctgagtgtaacgcaattagcaaaatccgccatcgcaacttgattggtgtcataacttgctgttcttgctctggcttgaatcaaaatgactttaaagccatagtattcaagttcatgcctcacggaaaccttgataaatggttacatccggaggtacactcatcagatccagttaaagttctaacactagtgcagagattgagcattgcttctgatatcgccgctgcactagattatttgcacaacagctgccatccaacaatagttcactgtgatttcaagcccagcaacattcttcttggggaggacatggttgcgcatgttggagaccttggccttgccaagattctcactgacccagaaggagagcaattgatcaattcaaagagttctgtagggctaatgggaacaattggatatattgctccagaatatgctgaatgtggtcaaatttctccatctggtgatgtatatagctttggtatagtgctccttgagatgtttacagggaaggcgcctacaaatgacatgtttactgatggattgacattgcagaagtatgcagaaatggcatatccagcaagactgatcgatattgttgacccccatctgctatcaattgagaacacattgggagaaatcaactgtgtcatgagttcagtcacaagactcgcactggtatgcagtaggatgaaaccaactgagaggctgcgcatgagagatgttgcagatgagatgcagacaataatggcttcttatgttacagaaatagacaaagtttctctatga</cdnaseq>

Protein Sequence

<aaseq>MIHVRHHHLRRALSNRSCPYIPSDIQSFRRHKFSFHIIRRTSES NIMHDLGHNDLLLNLLPEKCFKMFTALKLLLLPYLLLLASASCTQGLPFSNNTDLDAL LGFKAGLSHQSDALASWNTTTSYCQWSGVICSHRHKQRVLALNLTSTGLHGYISASIG NLTYLRSLDLSCNQLYGEIPLTIGWLSKLSYLDLSNNSFQGEIPRTIGQLPQLSYLYL SNNSLQGEITDELRNCTNLASIKLDLNSLNGKIPDWFGGFLKLNSISVGKNIFTGIIP QSLGNLSALSELFLNENHLTGPIPEALGKISSLERLALQVNHLSGTIPRTLLNLSSLI HIGLQENELHGRLPSDLGNGLPKIQYFIVALNHFTGSIPPSIANATNMRSIDLSSNNF TGIIPPEIGMLCLKYLMLQRNQLKATSVKDWRFITFLTNCTRLRAVTIQNNRLGGALP NSITNLSAQLELLDIGFNKISGKIPDGINNFLKLIKLGLSNNRFSGPIPDSIGRLETL QYLTLENNLLSGIIPSSLGNLTQLQQLSLDNNSLEGPLPASIGNLQQLIIATFSNNKL RDQLPGDIFNLPSLSYILDLSRNHFSGSLPSAVGGLTKLTYLYMYSNNFSGLLPNSLS NCQSLMELHLDDNFFNGTIPVSVSKMRGLVLLNLTKNSLLGAIPQDLRLMDGLKELYL SHNNLSAQIPENMENMTSLYWLDISFNNLDGQVPAHGVFANLTGFKTGFKFDGNDKLC GGIRELHLPSCPTKPMEHSRSILLVTQKVVIPTAVTIFVCFILAAVVFSIRKKLRPSS MRTTVAPLPDGMYPRVSYYELFQSTNGFNVNNLVGTGRYGSVYKGTMLLKKSETTVAI KVFNLEQSGSSKSFVAECNAISKIRHRNLIGVITCCSCSGLNQNDFKAIVFKFMPHGN LDKWLHPEVHSSDPVKVLTLVQRLSIASDIAAALDYLHNSCHPTIVHCDFKPSNILLG EDMVAHVGDLGLAKILTDPEGEQLINSKSSVGLMGTIGYIAPEYAECGQISPSGDVYS FGIVLLEMFTGKAPTNDMFTDGLTLQKYAEMAYPARLIDIVDPHLLSIENTLGEINCV MSSVTRLALVCSRMKPTERLRMRDVADEMQTIMASYVTEIDKVSL</aaseq>

Gene Sequence

<dnaseqindica>1..127#195..244#1195..4060#4137..4495#atgatccatgtccggcaccatcatttaaggagagcactgtccaatagaagctgtccatatataccatcagacattcagagtttcagacggcacaagttttcattccatatcatcaggagaacttcaggtacaaactgcactttctttgtttccgttcatattttgccaggccggttactgttcatgttcctcagaaagtaacatcatgcatgatctagggcataatgatctcctgttgaacctggtaggctatgcttctatttttgatataagctaccaagtcattatattataatagacaaaaaaaatggcaaaaccaaccagaggttaatcgactggagattctgagttcctgacctgatttttcttatacctgtacaaacagattgaaaatttaattcacgtcttgtttttcctgctttgcttttagaaattcaatttcaacgaagaaaggttcaaggtgtgaccaaattgccacatatatgagaacacgtgaatggcatatttaatgaaacactcattcgttttggacaataccagagcatgtttacttattttaaagagagcggagatcatttttatgattagaaaaataaaatgtaaggatttagctgaataactcttaactagccatggagattatcgacaaaaatagatgcaacctatcatgcataataacaacctattcggcgaacaaccaccgctgttgtacttcttctccaaaccatcataccagttaaaaaatatatttaaacaaatgcatcaccatgtcattgtcctcagtcataatgcacacatgacaagaactgtttacaaaactacaacagggattatttgcacatgtcctcatattttggagggtggaattctcgatttcatgttccaggaggttaagtaggccaaaccactgtatcatgcaggcggttaagtttccaacctttaaactttcaaaagtttagattgatacatgtagatttgcttgagtactttcatagcattataacactaatgagctttataaatagtattttatataaagatcagatatcaaagttttatttgggagaccatgtcaatgtccaaaatggcgtatttctgagttgtgaccgatgggagttttttctggcacacttattattccaagtgaaacttacctgggcatggaattgaagactaattcttttttgtttttagctgccagaaaagtgcttcaaaatgtttactgccctaaaattgcttctcttgccatatctgctcctactggcatcagcttcatgtactcaaggattgcctttcagcaataacactgatctggatgccttgctaggattcaaggcaggtctaagccatcagtcagatgcactggcttcatggaacacaacaacaagctactgtcagtggtctggtgtcatctgcagtcataggcataagcaaagggtattagcactgaatctcacctcgactgggctccatggctacatatccgcttccattgggaatctcacatatttgagaagtctagatcttagttgcaatcaactttatggtgaaatccctttgacgattggttggctgtcgaagttgtcatatctcgacttgtcaaacaattcattccaaggtgaaattcctaggacaattggccagctaccacagttatcctacctgtacctgtcaaacaattcacttcaaggcgagatcactgatgaactaaggaactgcactaaccttgctagcatcaaacttgacttaaacagcctgaacggaaaaatccctgattggtttggaggttttctgaagctcaattccatttcagtagggaagaacatcttcaccgggatcatcccgcaatcacttggcaacctctcggcgctgtcggaacttttcctcaatgagaatcacctcactggaccaatccctgaggcccttggcaagatcagcagtcttgagaggttggcactgcaagtaaatcatctgtcaggcaccatcccaagaacactcctcaacctttcctcgctgatccacattggcctgcaggagaatgagttgcatggaagattgccttctgatttgggcaatggcctaccaaaaatccaatacttcatcgttgccttgaaccatttcacaggaagcatcccaccttcaatagcaaatgcaaccaacatgcgctccatagacctctcttctaacaacttcactggaatcatacctccggagattggaatgctctgcctgaaatacctgatgctgcaaagaaaccagctgaaggcaaccagtgtcaaggactggaggttcatcacgttcttgacaaattgcacaagacttcgtgctgtgacaatacaaaacaacaggcttggtggagcactgccaaactctatcaccaacctatcagcacagctcgaactcctggatatcggatttaacaaaatttcaggtaaaataccagatggtattaacaacttcctcaaactaattaagttgggtctctctaacaatcgtttcagtggtccgatacctgacagcataggaaggcttgaaacactgcagtacttgacactagaaaataacctattgtctgggatcataccatcctcactcggaaacttaacgcaactgcagcaactctctctagataacaatagcttggaggggccattgccagcaagcattgggaacctgcaacaacttatcatcgcaaccttttcaaacaataaacttagagatcaattacctggagatatttttaatcttccatccttgtcgtacattctggatctgtcaaggaatcattttagcggttctcttccatcagcagtaggtggtctcacaaaacttacatacttatacatgtacagtaacaacttttctgggttgctaccaaatagtctcagcaactgtcagagcttgatggaacttcatttggacgataacttctttaatggtaccattcctgtatcagtgagcaaaatgcgaggattagtactgctaaatttgaccaaaaatagccttcttggtgcaattcctcaggacttaagactcatggatggactgaaagagctatatctttcacacaataatctatctgcacaaatcccagagaacatggaaaacatgacatcattatattggcttgacatatcctttaataaccttgatggccaagtcccagcacatggagtgtttgccaatttgacaggatttaagacaggatttaagtttgatgggaatgataagctttgtggtggtatacgtgagcttcatttgccttcatgcccaaccaaacccatggaacatagtcgaagtatacttctagtcactcaaaaagtggttattccgactgctgttacaatctttgtgtgctttatcctggcagctgttgtcttctctatacggaagaaactaagaccttcatccatgcgaacaacggtagcacctctgccagatggcatgtatcctcgagtatcctattatgaactgtttcaatcaacgaatggcttcaatgtcaacaatttggttggcactggacggtatggatctgtttataaggggacaatgctgctcaaaaagtcggaaactactgtagctatcaaggttttcaatcttgaacaatctggttcttccaaaagttttgtggctgagtgtaacgcaattagcaaaatccgccatcgcaacttgattggtgtcataacttgctgttcttgctctggcttgaatcaaaatgactttaaagccatagtattcaagttcatgcctcacggaaaccttgataaatggttacatccggaggtacactcatcagatccagttaaagttctaacactagtgcagagattgagcattgcttctgatatcgccgctgcactagattatttgcacaacagctgccatccaacaatagttcactgtgatttcaagcccagcaacattcttcttggggaggacatggttgcgcatgttggagaccttggccttgccaagattctcactgacccagaaggagagcaattgatcaattcaaagagttctgtagggctaatgggaacaattggatatattgctccaggtactcaatactattttccaataaatcttatggtttgagccatgcaatacttaattatcacgtttacgcactgcagaatatgctgaatgtggtcaaatttctccatctggtgatgtatatagctttggtatagtgctccttgagatgtttacagggaaggcgcctacaaatgacatgtttactgatggattgacattgcagaagtatgcagaaatggcatatccagcaagactgatcgatattgttgacccccatctgctatcaattgagaacacattgggagaaatcaactgtgtcatgagttcagtcacaagactcgcactggtatgcagtaggatgaaaccaactgagaggctgcgcatgagagatgttgcagatgagatgcagacaataatggcttcttatgttacagaaatagacaaagtttctctatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0374666, RefSeq:Os10g0374666