Os03g0850400

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Revision as of 13:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0850400| Description = Similar to Aspartate kinase precursor (EC 2.7.2.4)| Version = NM_001058441.1 GI:115456610 GeneID:4334794| Length = 5...")
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Gene Name

Os03g0850400

Description

Similar to Aspartate kinase precursor (EC 2.7.2.4)

Version

NM_001058441.1 GI:115456610 GeneID:4334794

Length

5382 bp

Definition

Oryza sativa Japonica Group Os03g0850400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36640776..36646157

Sequence Coding Region

36640865..36640945,36641031..36641249,36641350..36641432,36641519..36641559,36642764..36642918
,36643663..36643812,36643933..36644028,36644285..36644401,36644516..36644635
,36644717..36644809,36644898..36645014,36645362..36645478,36645636..36645698
,36645785..36645946

Expression

GEO Profiles:Os03g0850400

Genome Context

<gbrowseImage1> name=NC_008396:36640776..36646157 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36640776..36646157 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catggcggtggcgctccggttcgcggccgtcgcgcgggactcgccggcggccgccgctccccccagggtggggagggagcagcggcggcggttgtcctcaacaaggacgacgcggcgtcggtggccgccgccgccgcctcctccgcgacggggttcaccgtcgccatgaagttcggcgggtcgtcggtggcgtcggcggagcggatgcgggaggtggccgatctcatactcagcttccccgaggagactcccgttgttgttctctccgccatggggaagaccaccaataacctcctcctggccggagagaaggctgtcagctgcggcgccccgaaggcgtctgaaattcccgagctcgcagttatcaaggagctccatgttaggactattgatgagcttggattggatagatcgattgtttcaggtttattggaagaattggaacaacttcttaagggtgttgctatgatgaaagaactaactcctaggacacgggattaccttgtttccttcggtgaatgcatgtctacaagaatatttgctgcatatttgaataaacttgggaaaaaggctcggcagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggacattcttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgaccctgctattcctatagttactggtttccttggaaaaggatggaaatcatgtgctgtcaccactttaggcagaggtggcagcgacttgactgctaccaccattggcaaagcgttgggattaagagagatccaggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtgcgaacgcgatacctgtaccctacttgacttttgaggaggcagctgaacttgcctactttggtgcacaggttttgcatccccaatcaatgagaccagccaaagaaggtgatataccagttagagttaagaattcatataaccgtcgagcacctggtactgttattactaaaacaagagatttgagcaagagtatattaaccagcattgtattgaagtcaaacattactatgctggatatagtgagcacaaggatgcttggccagtatggttttctggcgaaggttttctcaatatttgaagatttaggtatctctgttgattgtgtggctaccagtgaagtcagtatatcattgacactagatccatcaaaactatggtgtcgtgaattgatccagcaggaacttgatcatgtagttgaagaacttgaaaaaattgcagttgttcatctactgcagcacaggtctatcatctcactgatagggaatgtacagagatcgtcattgattcttgagaaggctttcaatgttctacggagaaatggcgttaacgtccagatgatctcacaaggggcatccaaggtgaacatttcattggtggtccatgatagcgaggcgaaacagtgtatacaggcccttcattcagcattctttgagaacggtttcttgtcagaagttgaggaagaggatcttcaacacaatggctctcctgtgagcccaaatggtgtcatttacggaaactag</cdnaseq>

Protein Sequence

<aaseq>HGGGAPVRGRRAGLAGGRRSPQGGEGAAAAVVLNKDDAASVAAA AASSATGFTVAMKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAG EKAVSCGAPKASEIPELAVIKELHVRTIDELGLDRSIVSGLLEELEQLLKGVAMMKEL TPRTRDYLVSFGECMSTRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYP AVAKRLQGDWIDDPAIPIVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQV WKDVDGVLTCDPNICANAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVK NSYNRRAPGTVITKTRDLSKSILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFED LGISVDCVATSEVSISLTLDPSKLWCRELIQQELDHVVEELEKIAVVHLLQHRSIISL IGNVQRSSLILEKAFNVLRRNGVNVQMISQGASKVNISLVVHDSEAKQCIQALHSAFF ENGFLSEVEEEDLQHNGSPVSPNGVIYGN</aaseq>

Gene Sequence

<dnaseqindica>90..170#256..474#575..657#744..784#1989..2143#2888..3037#3158..3253#3510..3626#3741..3860#3942..4034#4123..4239#4587..4703#4861..4923#5010..5171#aaccacccccttcgcctcgccgccacctccgcttcgatccttggaagaggtgaggagaggagagatctagaagcttcggtcggtgctgacatggcggtggcgctccggttcgcggccgtcgcgcgggactcgccggcggccgccgctccccccagggtggggagggagcagcagtatctcgcgtgcgcggcggcggcgaggccgggagggaggtgttcgaggaggaggggattggtggtgcggtgccagagcggggcggcggcggttgtcctcaacaaggacgacgcggcgtcggtggccgccgccgccgcctcctccgcgacggggttcaccgtcgccatgaagttcggcgggtcgtcggtggcgtcggcggagcggatgcgggaggtggccgatctcatactcagcttccccgaggagactcccgttgttgttctctccgccatggggaagaccaccaataacctcctcctggtaaccatttctagctctcgctgtgattgtgaaactgaaatgtatggatttttctaccgccattctgtgcttaactgtgagtggttgattggttgttcaggccggagagaaggctgtcagctgcggcgccccgaaggcgtctgaaattcccgagctcgcagttatcaaggagctccatgttaggtgcgtttcgtttttcatttttcgtcatttcaggttagtttcggagcattcactcctgattattcaatttttcttgctttgctcaggactattgatgagcttggattggatagatcgattgtttcaggtattgtccagtgcttctttcacaaaatcccccccccctccccccaaccaaccaacacacacacaaaaatcactggaagcttagtctgtctgaagcttcccattttcctttggttggcaaaaacctacactgcaaaatgtatattccaatcttgttgatgcattgatttccatcttttggcacatgtatagtcgtcaaaatattgcgatttcacagtcctggttggtgtaaggtttagaagaccttattattttaaaggccataagatggtctatcaaaactacaggtaattcagattagggcattgtcatccactaaaccacatatctgtttttattcagtataaactaaagaccaccctctgatgggattttttttttagctacacaaacagtcctcattactatacgaagaaatttgatttcagaagttagacaatatttgtggttgaggattgtcaataaacacaagaacaccaattttcctttaatgttgtatggtggtgacaagacttgaggtcgttatcatgcattttatgtcattttcagcagagtacctttctattctgtatgcaacaaggtgatcttgtgtatcctatagcttagtgcctccaccctagttggtttaactaaagtagcggtttctaaagtaatgttcatacttattctaacaatgctttgaattcatacaatggacacataatcatcgagcagtcttaaagtagatgaggcagcaattgacatggcaagtgcaggtgatatacatcacaaggaagaaaacacattgtaatgtttgttttgttccagtttctacatacaacaaccaaataatttaaatgcagcaagtatggaaaataaactccaattaccctatttagaatccccaatctaatgacaatgaaatggaacatgtggcttctctcatgatctaaacctgtcaggtttctctacttgttttatagcccaccatgttttaaacatgaaagattttagacagctgaaacatggtatgctgcatccttagttataaatcataataccattttaaactttcaccaatcattcttcagcatattatccattggtcatcaatttatttttggtcaatgtagcatttctcgtcccttttgtctttaatggaagtactttctttagcactgtaccatctataaaagcactgtatttatcactgttaatatcaacaggtttattggaagaattggaacaacttcttaagggtgttgctatgatgaaagaactaactcctaggacacgggattaccttgtttccttcggtgaatgcatgtctacaagaatatttgctgcatatttgaataaacttgggaaaaaggctcggcaggtacatgcttctagtaaatgtgttggtgcagtagtttaattgaaggcttgttgagtgctttgtttcaatttagcttctagatccttttcatgataatataattcaaatattctatctaaaaaagcaacatctggacctgtgaaaaaaatgagagaatattactaccgtagcaaattgactaggttataggaataaggtaatttgggggacttcattacatttatcccttgctcatttgatttatagagattgtacatggttattgctagtgcaatagcacaaactaagaaatttctttccttatcaatagagctgatcactttcctttaaactgccaactgaaacctgctaagaaaaaatggcgtgcgatcagtttatttataaaatatacatgagtaatccactaaaacatagttcttttcattttttcttgtttcatagttcttttcattttttcttgtttccttttaatttctcatattcatttcaccataggaacaatgctggtgttccatagtaagttgatcttattgtgcttctatatgtgtgtagtcttttttaatggattgttattataatgagtatattttaattgttatttggtacctttttgttccatcaacacctaaaagttcctaagcatgcagcgtttacatgaagtttcagtgcgagcagttattggtatatgatggtggtccaggttttagcttgacgctgtctcaactaaattttgcttgattgcagtatgatgcatttgatattggctttataactactgatgatttcacaaatgcggacattcttgaagcgacatatcctgctgttgcaaagaggttacagggtgattggattgacgaccctgctattcctatagttactggtttccttggaaaagtatgcattttcccattactcatgtttaaggccatcgcgcctattcttttgcatttatgatgctgcacttgaattagatttgttatatttgtgtttatgataatgcacatcaaattgcagggatggaaatcatgtgctgtcaccactttaggcagaggtggcagcgacttgactgctaccaccattggcaaagcgttgggattaagagagatccaggtttgtgttcctaagtttgtgataattacctgttgaaaatccacttgctcccagaactcattcaacacctttaagcttctatgtgtaaacacattttcttagatcattccttcagttttgtgttcgttctggttctgcaattgaggaagttggttagatgtttaaccatatcagctgaaaactacagatatgctttgtggtgtctctgaggttttaccggctgttataactctttttctttttaaatctctaacaggtatggaaggatgttgatggtgtgttgacatgtgatcctaatatttgtgcgaacgcgatacctgtaccctacttgacttttgaggaggcagctgaacttgcctactttggtgcacaggtattgtagagcttattaccatgtgttgatacaattatttgacactctcacggtgattgagatagcatggtcaactactgttgccctaacagaaatacgtttgccaattgttaggttttgcatccccaatcaatgagaccagccaaagaaggtgatataccagttagagttaagaattcatataaccgtcgagcacctggtactgttattactaaaacaagagatttgagcaaggttcggcatatgaatagattttgatacgtctgtttgtaaatacttcttgttaatttctgatttgtgtacattatttttcagagtatattaaccagcattgtattgaagtcaaacattactatgctggatatagtgagcacaaggatgcttggccagtatggttttctggcgaaggtattttaatatgctcattgctcttcctgtttattttgttgacttatgcatattagtaatttgttcatatttttatgctcttgtgcaggttttctcaatatttgaagatttaggtatctctgttgattgtgtggctaccagtgaagtcagtatatcattgacactagatccatcaaaactatggtgtcgtgaattgatccagcaggtgagtttgagacagatcacgtttcgatatacatgtgtgatgtgtcaaacattgggtttgggggtatgaataaaatattgtacaaaagcctgaagtttgaattgcttgcgaatagctgaatgtgtttcatttttagttttctttggctttgatgaatatagatacttggaacagtagatagcccacatctagaaacctgttagggcaatttaaacttaaaaagaacagataatggattcaagttgttctgcaggattagcactttgctgatacatcctgaaaatacgtactgcaccagctgttctcttaattcaatattcatttgttttcttgggatgatgtggcaggaacttgatcatgtagttgaagaacttgaaaaaattgcagttgttcatctactgcagcacaggtctatcatctcactgatagggaatgtacagagatcgtcattgattcttgagaaggttattatctcttagccaccgaaaactctggttggacatattgttgatgaacacgattacttgcaatcctgtatgctagggtgtacttttatttttgcagggcattgactggtttgttttttgcatctaatcatttacatttgttgctgtacgccaggctttcaatgttctacggagaaatggcgttaacgtccagatgatctcacaaggggcatccaaggtatccatctctcctccccagatgaacgaaattcttttgtgcaaatgaccaaagggtgtatgacaatactcactgtgcgtgatcaggtgaacatttcattggtggtccatgatagcgaggcgaaacagtgtatacaggcccttcattcagcattctttgagaacggtttcttgtcagaagttgaggaagaggatcttcaacacaatggctctcctgtgagcccaaatggtgtcatttacggaaactagtcgacttagcatttcctgctattgttgtatctttggaatttggataggtttaaaggtgattcaggcatatagtcatttaggccacctaggtgaaatggtgaattccctggtgttgtaagagccctacaaggagcaccctgtgttaatgataatcacgcatagcaggctcacttataatgttaagtttgctgcaataccagcggtgcgatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0850400, RefSeq:Os03g0850400