Os10g0375000

From RiceWiki
Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0375000| Description = Protein kinase-like domain containing protein| Version = NM_001189194.1 GI:297727518 GeneID:9270033| Length = 6242 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0375000

Description

Protein kinase-like domain containing protein

Version

NM_001189194.1 GI:297727518 GeneID:9270033

Length

6242 bp

Definition

Oryza sativa Japonica Group Os10g0375000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12150739..12156980

Sequence Coding Region

12153523..12156534

Expression

GEO Profiles:Os10g0375000

Genome Context

<gbrowseImage1> name=NC_008403:12150739..12156980 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12150739..12156980 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttactattctgaaattgcttccaatgctatatatgctgctaatggcatctaccgaatatgctcaagcattcagcaatgagactgatctggatgctctgctagcattcagagcaggtctaagcaaccagtcagatgcactggcctcatggaacgcaaccactgacttctgccggtggcatggtgtcatttgcagcatcaagcataagagaagggtcttggcactgaatctgtcctcagcagggcttgttggctacatagccccatctattgggaacctcacatacctcagaactctagacctcagctacaatctgctgcacggtgaaatccctccaacaattgggcgattgtcgcgaatgaaatatctcgacctgtcaaacaattcactccaaggtgaaatgccttcgacaattgggcagctgccatggttatcgacactctacatgtcaaacaattcgctccaaggtgggatcacacatggcttgaggaactgcactcgcctcgtgagcataaaacttgacctgaacaaactcaatcgtgagatccctgattggcttgacggattgtcgaggatcaagatcatgtcactagggaagaacaacttcactgggatcatcccaccgtcactcggcaacctctcgtcgttaagggaaatgtatctcaatgacaaccagctcagtggaccaatccctgagagccttggtaggctcagtaagcttgagatgctggcactgcaagtaaaccatctctcagggaacatcccaagaacgatcttcaacctgtcctcacttgttcagattggtgtggagatgaacgaactggacggcacactgccctccgatcttggcaacgccctaccaaaaattcaataccttatccttgccctgaaccatttgacaggaagcattccagcttcaattgcaaatgcaaccacaatgtactccatagatctctcaggtaacaacttcactggcattgtgcctccagagatcgggacgctctgcccaaacttcctgttgctcaatgggaaccagttaatggcaagcagggtgcaggactgggagttcatcactttattgacaaattgcactagcctccggggtgtcacactccaaaataataggcttgggggtgcattgccgaactctatcggtaacctatcggagcgcctccaactactggatcttagatttaatgaaatttctaacagaataccagatggcattggcaacttccctaaactaattaagctagggctctctagcaaccggtttacaggcctcatacctgacaacattggaaggttgacaatgctccagttcttgacactagacaataatctattgtctgggatgatggcatcctcgcttgggaacttgacacaattgcagcatctttctgtaaataataataacctggatggtcctcttccagcaagtcttggaaacttacaaaggcttgtcagtgcaacattttctaacaataagctttcaggtccactgcctggagagatctttagcctatcatccttgtcattcgttctggatttgtctaggaaccaatttagtagttctcttccatctgaggttggcggtctcacaaagctcacatacttgtatatgcacaataataagttagctggggcgctgccagatgctataagcagttgccagagcctgatggaacttcgtatggatggcaactccttgaacagtaccatcccggtgtctataagtaaaatgcgaggtttggaactgctaaatttgaccaagaacagcctcactggtgcaattccagaggaattaggactcatgaaaggcctgaaggaactataccttgcacacaataacttgtctttacaaatccctgaaaccttcataagcatgacgtcactataccaactagacatatccttcaatcatcttgatggtcaagttccaacacatggtgtgttttccaatttgacgggattccaatttgttgggaacgacaagctttgtggtggtattcaagagctgcatttgccctcatgccgagtaaagtctaatcgaaggatacttcaaattatccgaaaagcagggattctgagtgctagtgtcattttggtgtgcttcatattggtacttctggtcttctatttgaagaagagattgaggcctctgtcatcgaaagtagaaatagttgcttcttctttcatgaatcaaatgtatcctcgagtttcttattctgacttggccaaagcaacaaacggcttcacatccaacaatttggttggcacagggcggtatggatctgtttacaagggtacaatgcggttcaagaattcagtatctgacgtagctgtgaaggttttcgatcttgagcaatctggttcttctaagagttttgtagcagagtgtaaggcactaagcaaaattcaacaccggaacttggttggtgtcataacttgctgctcttgccctaatttgaaccaaaatgacttcaaagcccttgtgttcgagttcatgccttatggtagtcttgataggtggatacatccagacatagatccatcaagtccagtcgaagttcttacgttaatgcagagattgaatattgctcttgatattggtgctgcactggactatttgcacaacaactgccagccagcaatagttcattgcgacttaaagcccagcaacattcttcttggggatggcatggttgctcatgttggggattttggccttgcaaagattcttacagatccagaaggtgaacaactgatcaattcaaagagttctgtggggataatgggtacaattggatatgttgctccaggtaaatcacatttttgctgcagtagttattgtgctttgacaggaattgctaatgtcgcatatgcattgcagaatatggagaaggtggtcaaatttctccatacggtgatgtctacagctttggtatattgctccttgagatgtttacaggtaaggcgcctacacatgacatgttcagtgatggattga</cdnaseq>

Protein Sequence

<aaseq>MFTILKLLPMLYMLLMASTEYAQAFSNETDLDALLAFRAGLSNQ SDALASWNATTDFCRWHGVICSIKHKRRVLALNLSSAGLVGYIAPSIGNLTYLRTLDL SYNLLHGEIPPTIGRLSRMKYLDLSNNSLQGEMPSTIGQLPWLSTLYMSNNSLQGGIT HGLRNCTRLVSIKLDLNKLNREIPDWLDGLSRIKIMSLGKNNFTGIIPPSLGNLSSLR EMYLNDNQLSGPIPESLGRLSKLEMLALQVNHLSGNIPRTIFNLSSLVQIGVEMNELD GTLPSDLGNALPKIQYLILALNHLTGSIPASIANATTMYSIDLSGNNFTGIVPPEIGT LCPNFLLLNGNQLMASRVQDWEFITLLTNCTSLRGVTLQNNRLGGALPNSIGNLSERL QLLDLRFNEISNRIPDGIGNFPKLIKLGLSSNRFTGLIPDNIGRLTMLQFLTLDNNLL SGMMASSLGNLTQLQHLSVNNNNLDGPLPASLGNLQRLVSATFSNNKLSGPLPGEIFS LSSLSFVLDLSRNQFSSSLPSEVGGLTKLTYLYMHNNKLAGALPDAISSCQSLMELRM DGNSLNSTIPVSISKMRGLELLNLTKNSLTGAIPEELGLMKGLKELYLAHNNLSLQIP ETFISMTSLYQLDISFNHLDGQVPTHGVFSNLTGFQFVGNDKLCGGIQELHLPSCRVK SNRRILQIIRKAGILSASVILVCFILVLLVFYLKKRLRPLSSKVEIVASSFMNQMYPR VSYSDLAKATNGFTSNNLVGTGRYGSVYKGTMRFKNSVSDVAVKVFDLEQSGSSKSFV AECKALSKIQHRNLVGVITCCSCPNLNQNDFKALVFEFMPYGSLDRWIHPDIDPSSPV EVLTLMQRLNIALDIGAALDYLHNNCQPAIVHCDLKPSNILLGDGMVAHVGDFGLAKI LTDPEGEQLINSKSSVGIMGTIGYVAPGKSHFCCSSYCALTGIANVAYALQNMEKVVK FLHTVMSTALVYCSLRCLQVRRLHMTCSVMD</aaseq>

Gene Sequence

<dnaseqindica>2785..5796#gtcttgcatccgggcttccataatacgaagctgccggccggccggcaagagcgacgcgcgcggcaacggagaccacattatccgatccgatctgccgcgcgcgtgtcgcatatgatctccagggtattcttgctgctagctagctgcttggtaagtgctcgtctctaccttccccttccctatcacctacatgcgcttcgaccattcataatccattccttcatccggccgctaattgatgcgttttgttgcttgcaggttaattaagttgttgcaatagttaatcacttccatggaatgggcttgaatcgacccagctggtactgtggtacatgccttcatcttcttgttgttgtcgtcgtctttgtttatcactactctctgtttgtgtgcaacagcaacctagcttagttttacaagacatgatgcgatctaccatgctaagtagggtgtgtttagttcacgccaaaattgtaagtttggttgaaattggaacgatatgacggaaaagttgaaagtttatgtgtgtaggagtttcgatgtgatgaaaaagttggaggtttgaaaaaaaagtttggaactaaacaaggccgtagtatattacggaccgccaaattaaagtgctctcaaagttctagtggcaatgcttgcacccgcgctagccatgtatggaggttatttgtgactcgtttgatccaaggaacatatagcttacggctccttttaaacgcatgatttttacagggttaatttgggccagctctttttacggaagtttcaatatggactatagactaggggaaagacattagtttcacttttgaccaagtaaatttataaaatgtttcaatttgaaccccttcttctccatcccccctctctctcttcttgctttggcgctccggggagcaaggacaggttgagctcgagcttgagcatgaccccaatgcgtatgaaggttgaactcgagcttgagcatgaggtccaaggacatgcgtatgattgcggcctgcgggagccacctgaaccactgaaggtggtcaaggatgttcgagctcagctgttgcttaccgcggcatagcaaagtccgggagagagagagagaggacaaggagaggatggaaaaggtctaaactgaaatctttagcaatcttatccggttcaaaaatgaaaatgaagttttactcctagtccaaactgtaacattggtaaaagaaaatgtggtccaaagtgatttattgtggtccaaactacaacattaaaatcttttggcaaattttgctaaaggacatctaaaatttgtgtaatttactgatagacattggaaaaatatgtcacgccgaaagaaatctaaaaaaaatcctaaattgctagaggaaactttcggttcaattagagagataaatcttaagaaagacgagaatggccctagaaccgcatacttcaatcatggcgtcaaaataaaaatttgaaaattatgcaactctaaatttaccatcactatttaccatcactccaagtacatcactagcataaatcatattccatcttcattctatcctaagctcaaaagcttttgaccataagggcattcttatctttttgaagaatttctttctccaattgagccgaaaaagttctttaccaaattactagttttttcgagtgtctttgaaccaaccagcgaattacacaaatttttgagttccttgtgcctagacatttaaaccaagagataatccaagaaatgtcattaacaattgtccaaatccaaaaaatgcaatcgataagtgtgagttccaagaaatgccattgtaaatgactttgtcctaaaaatgccaccgccgttaggttaatggcacggaatggccggaaacctaacggcgatggtatttttgggaaaaaaaatcttttgtacgatggcatttcttgtaattcacacttgttgatggcatttattagatttggacgcttgtcaatgacatttttttattatctcttaaaccaattatcttagacaattgacattcaatacagtgcacgatgtttctcaagggaaaacaaaggtattttgcactaacttgagtcatgtgtcactgacccaaaaaatttagaaatatagcaaattggctttaaaatatcaacatttttggggtgctatctttattgagaagtaattctgaaaatatttttagatttgttgtgtgcaccaatttgatctcgtaaaatcattttttgcaaatgcttctttttgaaaaaagatttgtttgaatttgcaaccaaaaaaagtagagccatatgcaccaaattgttaaaattttagtttgaatatgatttatagaataacaaatttaggatgtattagaagtgcatttagtcaatgcaaaaacaccttggcttcgcctcaatctttagggtcagaaattaaactatcgaaaaagttgagagacatgaagtagacaatcctttataaagaccaaaccagttttaaaattaaattcagggaaaaagactaaatggtaatggaatttaaagtgtaaagcaaacctgataagaagttagaaaccaatgaaaagcctgtcataggcatagcctgtagcatattttattgcattttaattctatacagctatatacactgacaaattctgatggctcgtttatctttttctgtggaacatagagcaataatcctgagtaatttggttcaacattctcaaatggcagcgctggggacaaggtcctagtggttctggttcacaatagtcagggaactgctacacaatgtttactattctgaaattgcttccaatgctatatatgctgctaatggcatctaccgaatatgctcaagcattcagcaatgagactgatctggatgctctgctagcattcagagcaggtctaagcaaccagtcagatgcactggcctcatggaacgcaaccactgacttctgccggtggcatggtgtcatttgcagcatcaagcataagagaagggtcttggcactgaatctgtcctcagcagggcttgttggctacatagccccatctattgggaacctcacatacctcagaactctagacctcagctacaatctgctgcacggtgaaatccctccaacaattgggcgattgtcgcgaatgaaatatctcgacctgtcaaacaattcactccaaggtgaaatgccttcgacaattgggcagctgccatggttatcgacactctacatgtcaaacaattcgctccaaggtgggatcacacatggcttgaggaactgcactcgcctcgtgagcataaaacttgacctgaacaaactcaatcgtgagatccctgattggcttgacggattgtcgaggatcaagatcatgtcactagggaagaacaacttcactgggatcatcccaccgtcactcggcaacctctcgtcgttaagggaaatgtatctcaatgacaaccagctcagtggaccaatccctgagagccttggtaggctcagtaagcttgagatgctggcactgcaagtaaaccatctctcagggaacatcccaagaacgatcttcaacctgtcctcacttgttcagattggtgtggagatgaacgaactggacggcacactgccctccgatcttggcaacgccctaccaaaaattcaataccttatccttgccctgaaccatttgacaggaagcattccagcttcaattgcaaatgcaaccacaatgtactccatagatctctcaggtaacaacttcactggcattgtgcctccagagatcgggacgctctgcccaaacttcctgttgctcaatgggaaccagttaatggcaagcagggtgcaggactgggagttcatcactttattgacaaattgcactagcctccggggtgtcacactccaaaataataggcttgggggtgcattgccgaactctatcggtaacctatcggagcgcctccaactactggatcttagatttaatgaaatttctaacagaataccagatggcattggcaacttccctaaactaattaagctagggctctctagcaaccggtttacaggcctcatacctgacaacattggaaggttgacaatgctccagttcttgacactagacaataatctattgtctgggatgatggcatcctcgcttgggaacttgacacaattgcagcatctttctgtaaataataataacctggatggtcctcttccagcaagtcttggaaacttacaaaggcttgtcagtgcaacattttctaacaataagctttcaggtccactgcctggagagatctttagcctatcatccttgtcattcgttctggatttgtctaggaaccaatttagtagttctcttccatctgaggttggcggtctcacaaagctcacatacttgtatatgcacaataataagttagctggggcgctgccagatgctataagcagttgccagagcctgatggaacttcgtatggatggcaactccttgaacagtaccatcccggtgtctataagtaaaatgcgaggtttggaactgctaaatttgaccaagaacagcctcactggtgcaattccagaggaattaggactcatgaaaggcctgaaggaactataccttgcacacaataacttgtctttacaaatccctgaaaccttcataagcatgacgtcactataccaactagacatatccttcaatcatcttgatggtcaagttccaacacatggtgtgttttccaatttgacgggattccaatttgttgggaacgacaagctttgtggtggtattcaagagctgcatttgccctcatgccgagtaaagtctaatcgaaggatacttcaaattatccgaaaagcagggattctgagtgctagtgtcattttggtgtgcttcatattggtacttctggtcttctatttgaagaagagattgaggcctctgtcatcgaaagtagaaatagttgcttcttctttcatgaatcaaatgtatcctcgagtttcttattctgacttggccaaagcaacaaacggcttcacatccaacaatttggttggcacagggcggtatggatctgtttacaagggtacaatgcggttcaagaattcagtatctgacgtagctgtgaaggttttcgatcttgagcaatctggttcttctaagagttttgtagcagagtgtaaggcactaagcaaaattcaacaccggaacttggttggtgtcataacttgctgctcttgccctaatttgaaccaaaatgacttcaaagcccttgtgttcgagttcatgccttatggtagtcttgataggtggatacatccagacatagatccatcaagtccagtcgaagttcttacgttaatgcagagattgaatattgctcttgatattggtgctgcactggactatttgcacaacaactgccagccagcaatagttcattgcgacttaaagcccagcaacattcttcttggggatggcatggttgctcatgttggggattttggccttgcaaagattcttacagatccagaaggtgaacaactgatcaattcaaagagttctgtggggataatgggtacaattggatatgttgctccaggtaaatcacatttttgctgcagtagttattgtgctttgacaggaattgctaatgtcgcatatgcattgcagaatatggagaaggtggtcaaatttctccatacggtgatgtctacagctttggtatattgctccttgagatgtttacaggtaaggcgcctacacatgacatgttcagtgatggattgaccttgcagaaatatgcggaaatggcatatccagaactactgatagatattgttgacccccttatgctatcagttgagaatgcatcgggagaaatcaacagtgtcattactgctgtcacaagactcgcactagtatgcagcaggaggaggccaactgataggttatgcatgagagaagttgtagctgagatacagacaattagggcttcctatgttgaagaaataaacaaaatagtttctgactgatgcaacattagtgcgccgtttgattttttagcttcataaaaggtgttaactgcataatatcggcaaaagaaatgtaacacacagtactcttctgttaggcactcattgattttaagaccaagtacaggatcaatattttttgctgatgtaatccatttattggtgatcccaaaccattagcaatcaatggtgctaattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0375000, RefSeq:Os10g0375000