Os03g0852200

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Revision as of 13:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0852200| Description = Der1-like domain containing protein| Version = NM_001058456.1 GI:115456640 GeneID:4334809| Length = 4484 bp| Defini...")
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Gene Name

Os03g0852200

Description

Der1-like domain containing protein

Version

NM_001058456.1 GI:115456640 GeneID:4334809

Length

4484 bp

Definition

Oryza sativa Japonica Group Os03g0852200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36734388..36738871

Sequence Coding Region

36734700..36734897,36735753..36735806,36736991..36737074,36737235..36737449,36738506..36738605
,36738725..36738823

Expression

GEO Profiles:Os03g0852200

Genome Context

<gbrowseImage1> name=NC_008396:36734388..36738871 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36734388..36738871 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaggcggtggaggagtggtaccggcagatgcccatcatcacgcgctcctacctcaccgccgccgtcgtcaccaccgtcggctgcaccctcgagatcatttcgccctaccacctgtatctgaaccccaagctggtggtgcagcactacgagatctggcgcctcgtcaccaacttcctctacttccgtaagatggatttggactttctgttccacatgttttttcttgcacgatactgcaagcttcttgaggagaactcattcagaggaagaactgctgactttttctacatgctcttgtttggcgctactgtcctgactggcattgttctgattggtgggatgataccttatatttctgagacatttgccagaatcctgttcttgagcaattcattgacatttatgatggtttatgtatggagcaagcacaatcccttcattcatatgagcttcttgggtttgttcacctttactgctgcttatttaccttgggtccttctggggttctctattcttgtgggaagcagtacatgggttgatttgctgggtatgattgctgggcatgtgtactacttcctggaagatgtatacccgcggatgactgggaggcgtcccctgaagactccttcgttcatcaaggcgctatttgctgatgacaatgttgttgtggcaaggccacccaatgctgggcttggcgctggagcaaggtttggtgctatgggtgcagacccccaggcccaatga</cdnaseq>

Protein Sequence

<aaseq>MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNP KLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLF GATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFT AAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALF ADDNVVVARPPNAGLGAGARFGAMGADPQAQ</aaseq>

Gene Sequence

<dnaseqindica>3975..4172#3066..3119#1798..1881#1423..1637#267..366#49..147#actcgagactcgagagaggagagctcgcccgctagggtttcgcgggagatggcgcaggcggtggaggagtggtaccggcagatgcccatcatcacgcgctcctacctcaccgccgccgtcgtcaccaccgtcggctgcaccctcgaggtctctctctctctctctctctctccgcccgcccctctttacatgattctactctctcctcgatctggtgcttgtttgagtgcctgcgctgatggcctaatgccctccttgcctcgcagatcatttcgccctaccacctgtatctgaaccccaagctggtggtgcagcactacgagatctggcgcctcgtcaccaacttcctctacttccgtaagatgggtatgcgcctcttacctttctcttacacttgcaagattgtcagtttacaaacagtatctacttatatttactatttgtgcggatcccaatcgtaatttcaccacgtttgcatagtagtaataagagttctcaatgataattctattattgtattctgagggtatcatttcagaggtgtgaagcatagggatgtgaagttagaacggaagtattgttctgcccatgactcattgatgaaggcttatgcgcctacgtgctacttagagaatgtacagtaaggtataaagcgctagtgccaagagtgctcatgatgaggtggaggagagaaggagctgcccctcatgcaagaggcggcctgtacatgtgctccatcaccaagagagggaataggaagataaccaatagattgatatcaaacaaataaaataaaattggtattgtcctaatcgatgagtagataatgtgggcaaaaatagaggcatcagttacctctactattaaactcgctctttagcgtccttgttggacagcttcaacctgtggtattgattagggataagtgcctttgggctgcattaggagtttaggtgggacctcgtcaaagaacttatcaagtggtatacaatttgcaactctttaattatgatcacaatgtatttcaaactcataatgtgtgaaagctccttatacccacccactcaaggtccttgtttgttttcattgaattaattgtgtctaccctgtattttgttcccctaattgtatgatcctgatgtatagcgcatttagaaaattatatctaacatcttaccacgtctccagttaccattataagttaacagcggatatagatttatgttatcgtgctaatttatgtgtcctcatgtgacaccatggaagtgcttgtatattattagttcgctacacgtgtgttgcgtatgtattgcattataagtagaacatgtaagcgctgttattctagcattattgaataatttttatgcataatttaatccctttactcttattcctgaatccatcttttgttgtttccagatttggactttctgttccacatgttttttcttgcacgatactgcaagcttcttgaggagaactcattcagaggaagaactgctgactttttctacatgctcttgtttggcgctactgtcctgactggcattgttctgattggtgggatgataccttatatttctgagacatttgccagaatcctgttcttgagcaattcattgacatttatgatggtacgagattagtacaagcattatacttggtttttggttttctacaccatcgttaggggtgcaggacaaatcttagggattttctgggctctgaaaatagtcttcttgggtgcatacttagaagttgagttttagtaattcctctcgtatggacctgcaggtttatgtatggagcaagcacaatcccttcattcatatgagcttcttgggtttgttcacctttactgctgcttatttaccttgggtaagtatttttagtttcctttccatgtaccacaacatgactacatgactaatgcacacttgattctcatcttaagttaacttcctagagcctcttcatataatcatttttttcatgcctgaatgttaaatcacacgatttgaaatctgtaattgatttcatatgttttatgcaatagaattatttaaaacctcttcaatttcaatatttttctttgtttgtagagcaaaatatatgtttgattttttcccctattagccaagagcccaaaagcaaaccattttttttcccaacagttgtccatttgtcctaagcattacccaacaaatgcttttctgttggtttgttttgtgatgaatgctctcactatttcacaacatgaagtagtagtaactttatgttttggtgcaagaatggtctatttagtgtgtaaaaacgtcacaggaacttggtgtaaaatgctagacctttcctttaccatggagccaatttgttgttccagtaggtctaggttcatcttaaaaatgaatgctccctccatttcaaattacttgtcgttctagctttgccactagtcaaacatttctatttttcaccatccatttttggaaattcgtgtaggttaacatgcaatatatattatggaagtatttctcatggtgaatctaaaaacataaaccttatgatgttaaactatatgaatttctacaagttgatgttcatataaacatttgatttaggacaaagctagaacggcaagcaatttgaaatgaggggagtacctcactagagtgggaataaatttctgtattcagtactgtgtgataaagtaaaatggggaattagcaaatgtaaatgtgctctctttacagaatgccttttggatttgctaagccttcaacataaactggctgtgacaatgtacgctgaaaaggttttgtcaaccaactcctggacatccttttgcatcgcgcacatatttcattgtcagaatgtattattacaaagtagagaaacagaaactctagtggctctgatcttgtttttgctttgtagtgatccttgattttactttttcacctgatatcacacagatgaaatttcactgaaattgttcaaagtttattcaactttatatcagagatgagaaacagctgcgtgaattgttctcttttaaattgcaggtccttctggggttctctattcttgtgggaagcagtacatgggttgatttgctggtatgtttcttatcgttatgatgaatatcataatagcactgtgattttttagtgtctgtgctgccaatgctgcagttaaagaatgccttgtagaattgcaagctcagtatggtcaacggttatttcttctatcatggttttgtatgaatattgtttgtttcgttttccatgagctacaagcctgtgactggtttttattggtcatcttgctgtccaacttttatttggcattgcttatttgcaagtgtgacataagcctgtgttaaaagcttgttccattgtttttgaatgcctgaacctgggctctattttgcattttctacccagcttgccaatagatgtttctgggttagtgagctataacctgatgtaggtttaactagctacattgagatggtactagctattttcaatggttaaccttggtgttgaagtatggaagctgaaaactttattttcaacatgttagcatatttttaacagaaataagctattggtctttttgctgtctatgtgtgacgatgctggtagacatagcagcatgtattaatggtaacttggtaatggagtgctggctggctcgtgtcttctctgactggtttgtatttgccaatatcatgaacttaaaatggatcttatttgcttgtttgtattaacagagactttttcctcagagataatttatgcctgtgtactctcctgaccatcattttcatgcatctgtatttttttaatgaattattagccatgtccttattcggtatgaatgcctgatgtattgactgaattaaaattgtcaatatgctgttttcttcttggaccatatctgtaattgacaaatattgtttctttcagggtatgattgctgggcatgtgtactacttcctggaagatgtatacccgcggatgactgggaggcgtcccctgaagactccttcgttcatcaaggcgctatttgctgatgacaatgttgttgtggcaaggccacccaatgctgggcttggcgctggagcaaggtttggtgctatgggtgcagacccccaggcccaatgatcaattgccattcgaaggcagttactgattcgagagttcttttttttttttcatctgttcaaattgcgaaattgtacaagcaatgttcccgtgtatttatacaggctatagatcagagaattattgtgcataagaaagcatttagtagtatctggggcagctaaatttcttaactggacacgaagggtgaaggaaatggtttacgagtttcaaccggctggacaatgccgccatccttggttgcagaaactgatcctttttgcgacgattgacatctgaccgggatacttttcaatgtggtagtctattggt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0852200, RefSeq:Os03g0852200