Os10g0376200

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0376200| Description = Leucine-rich repeat, typical subtype containing protein| Version = NM_001071007.1 GI:115481757 GeneID:4348488| Lengt...")
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Gene Name

Os10g0376200

Description

Leucine-rich repeat, typical subtype containing protein

Version

NM_001071007.1 GI:115481757 GeneID:4348488

Length

5047 bp

Definition

Oryza sativa Japonica Group Os10g0376200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12238084..12243130

Sequence Coding Region

12239695..12239751,12239834..12241073,12241211..12241357,12242411..12242901

Expression

GEO Profiles:Os10g0376200

Genome Context

<gbrowseImage1> name=NC_008403:12238084..12243130 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12238084..12243130 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccaggatgaggtgcatcccgggtctgctcgccggcaggaggaagaaacgagtggttgctgatgccaagaaggctagtggggattgtcccaaggtgaagccggtggagttcatcgactcgccggccgccgaatgcggcgacagaaaggtcgcgccgtgcgatgtcaaggtcgtcgtcgacgacacggttgtcaccgccttggcggcgaccaaaggaggcggcggcggcgacgatcatggcggcgacatggcgttggcgaagaggggcagcatgtcgtctgacttcgagttcgagttccacgcacacgagaagcccgacggacatggcgtccccgccggcgcctcgccggacgcggtgatcgcgagcgggaaggaggtggtggtggccgacgcgtcgccgaagctgaagcggtcgtgctccaacatcgagacgaagcggccgggcacgcacgacgcggcggcggaggcggcgccggcgcggtcaagatcctacggcgacctcgggaacctgcccggcggcggaggcggcggcatctccctggagacaaccccgcgcggcgcggcgccgcaggcggaggcgagcccggcgtcggtgaggacgtcgcgcaccgccgaccgcgtgatgctgaagaagcgttcgtcgagccaggtgctcccgtcgcggagccgcaagctgtggtggcggctcttcctctggagccaccgcaacctgcaccgcccgtcgccggcggcgcgccccgcggccgccgcgtgcacacccgcgggccaccacggcggcggcggcggctacacctccgacacgctggaggaaggcccggccaccgccgccgccgaccgcaagaacaagaaggtgatggtcgacgactcgccgccgatccccaaccagtgggtcgccttctccgccgacaactccctccacgaccgcatcagcgcgtgggtgaacagcatcgacaacgacacgttccgcatcgccgaggaagacgacgacgaccaccaccaccaccaccattaccacggcgacgccgacgacgacgacggcgagcacgccatggagcacggtgactgcgtggcgcgggcgccgcgcgccctggagatcggcgagtcgtccgggaaggggcacggcaagtcgaagcgttccacggccgccgacgaggtcgcccaggccaacaccatcatccagtcgctcaacgcattctcgtcggtggcgcacatctccggcatgggcctcaaggtggtgccgatgatcgcgccgttctccagcctccgcgccatcaacctctctggcaacttcatcgttcatatctcgccgggatcgctgcccaagggccttcactcgctcgatctgtcgcggaacaagatcgccaacatcgaggggctccgggagctgaccaagctgcgcgttctcaacctcagctacaaccggatctcgcgcatcggccacgggctgtcggggtgcacggcgctgagggagctgtacctggcggggaacaagatcagcgacgtggaggggctgcaccggctgctgaagctggcggtgctggacctggggttcaacaaggtcaccacggcgagggcgctgggccagctggtggccaactaccactccctccgcgccctcaacctcgtcggcaaccccgtccaggccaacgtcggtgacgacgccctccgcagggccgtcacgggcctcctcccccacctcgcctacctcaacaagcagcccgtcaagccccgcggcgccgcccccgccgacggcgccgtgtcgcgcgccgcgctcgaggccggcggcgccgggggaggctcccgtagcgcgcggaagcggtcgtccgctgcggcggcgtcgcggaggctggggcagcgcggcgaggggagcgggagcgggaggagcaggtccaaggggaggcagccgtcgagcagcttgccggcgaggaggtga</cdnaseq>

Protein Sequence

<aaseq>MTRMRCIPGLLAGRRKKRVVADAKKASGDCPKVKPVEFIDSPAA ECGDRKVAPCDVKVVVDDTVVTALAATKGGGGGDDHGGDMALAKRGSMSSDFEFEFHA HEKPDGHGVPAGASPDAVIASGKEVVVADASPKLKRSCSNIETKRPGTHDAAAEAAPA RSRSYGDLGNLPGGGGGGISLETTPRGAAPQAEASPASVRTSRTADRVMLKKRSSSQV LPSRSRKLWWRLFLWSHRNLHRPSPAARPAAAACTPAGHHGGGGGYTSDTLEEGPATA AADRKNKKVMVDDSPPIPNQWVAFSADNSLHDRISAWVNSIDNDTFRIAEEDDDDHHH HHHYHGDADDDDGEHAMEHGDCVARAPRALEIGESSGKGHGKSKRSTAADEVAQANTI IQSLNAFSSVAHISGMGLKVVPMIAPFSSLRAINLSGNFIVHISPGSLPKGLHSLDLS RNKIANIEGLRELTKLRVLNLSYNRISRIGHGLSGCTALRELYLAGNKISDVEGLHRL LKLAVLDLGFNKVTTARALGQLVANYHSLRALNLVGNPVQANVGDDALRRAVTGLLPH LAYLNKQPVKPRGAAPADGAVSRAALEAGGAGGGSRSARKRSSAAAASRRLGQRGEGS GSGRSRSKGRQPSSSLPARR</aaseq>

Gene Sequence

<dnaseqindica>1612..1668#1751..2990#3128..3274#4328..4818#aggacactcctctcctctgcttctcttcatcccattcgcatcagtgctcagcgacctaatcaagatctttactcgaacagaagagtataagtccagcaccggagaagcatctgattctgaattcggtttgctgctgcctggggagaggaaggttaggttcctggctcctcctgactgacttaatttcctttcgctgtctttctccaccaggtgtggtgcttgtcttttgtgttcatgtgtgattcaagtgattcttgtttggtcggtctctgcctttttgttctagagagatctcctggtgctcttggggcactctctgctcctgttatactggtgatggccttctctgttcttgtgctgaaatcctgcttgaatcaacagagtttctttaggttttttttttttgattcttgattcatgtgttgttcttgaggaagaggtcaggagagttcagttgggttggagccattggttgttgccatgcatctttctcttcttgatttttatgtgtgtgtgtgcagtctctttctggatgattctgtactggcagtttgtggtacaaacaggggaagaaaccaagatcggcttcttaatgtgtagtaaacaaatttccagtcttgctggaagttgacatggttaattagagaaaggaaacaaattagagttagttttagtaaatcccaatgattccttcagggcttgtactgcatgaagccaagaatctgatagctttcaccacattagatttaacccagatatccaataaggagaaagagcatgcaaaatcactgttctttacttcttgttttctacagcagcaataattttgccatgaaatcgcatagctgtcatggcgattctcttctcaccaaccaaatttagaacagaaacccagctgtgttttccccccttttaattttaactcttctgtgaattcaccgcatgatacacgccaagaaagtgttttaaatcgctagctaaaaaacatttagcgatcggtcttctcaaacagctaatagccgattgaatggggctgtagcggctaaattctacatgaggcgagaaatagctagagacaccctcctcgaacagctatatctgaagatagcggtagctatagccggagatttaagacctcgcaagaaacagggatggtgtcacatggcataggcaagaagagtctttcttcttcctcctactcgccgccgtcttcgtcgtcgtcgccgcctcggtcttcatagctcggctgcaatgtctgatcgtcgtgcgtgtgcgtaggattcagctgagtttggttcttagtggattcgtttgaaattggtgcagggtaaggtttgccaagacggctccgcggcggcgtctccggctaatctccggtcactctggccttccccgtggcgccgccgccgcctcgcgccgtgagtgaggtgtgtggtgctgtggggcatgcgatctcctccgccgtcttcctcctcgtctcgccgtcgctgctccggagagtctctcccgtagacaacggctaaaaggtctcagaaacttactgaaatttggaacgaattcgtctgaacagaagaaaattcgaagggatttgcgagttttgagtaggtcaagatgaccaggatgaggtgcatcccgggtctgctcgccggcaggaggaagaaacgagtggtaaatgtttgatcgaattttgcctttctgtttttgtgagattttggttttgagtttgtaatggttggtgagtgttcgacaggttgctgatgccaagaaggctagtggggattgtcccaaggtgaagccggtggagttcatcgactcgccggccgccgaatgcggcgacagaaaggtcgcgccgtgcgatgtcaaggtcgtcgtcgacgacacggttgtcaccgccttggcggcgaccaaaggaggcggcggcggcgacgatcatggcggcgacatggcgttggcgaagaggggcagcatgtcgtctgacttcgagttcgagttccacgcacacgagaagcccgacggacatggcgtccccgccggcgcctcgccggacgcggtgatcgcgagcgggaaggaggtggtggtggccgacgcgtcgccgaagctgaagcggtcgtgctccaacatcgagacgaagcggccgggcacgcacgacgcggcggcggaggcggcgccggcgcggtcaagatcctacggcgacctcgggaacctgcccggcggcggaggcggcggcatctccctggagacaaccccgcgcggcgcggcgccgcaggcggaggcgagcccggcgtcggtgaggacgtcgcgcaccgccgaccgcgtgatgctgaagaagcgttcgtcgagccaggtgctcccgtcgcggagccgcaagctgtggtggcggctcttcctctggagccaccgcaacctgcaccgcccgtcgccggcggcgcgccccgcggccgccgcgtgcacacccgcgggccaccacggcggcggcggcggctacacctccgacacgctggaggaaggcccggccaccgccgccgccgaccgcaagaacaagaaggtgatggtcgacgactcgccgccgatccccaaccagtgggtcgccttctccgccgacaactccctccacgaccgcatcagcgcgtgggtgaacagcatcgacaacgacacgttccgcatcgccgaggaagacgacgacgaccaccaccaccaccaccattaccacggcgacgccgacgacgacgacggcgagcacgccatggagcacggtgactgcgtggcgcgggcgccgcgcgccctggagatcggcgagtcgtccgggaaggggcacggcaagtcgaagcgttccacggccgccgacgaggtcgcccaggccaacaccatcatccagtcgctcaacgcattctcgtcggtggcgcacatctccggcatgggcctcaaggtggtgccgatgatcgcgccgttctccagcctccgcgccatcaacctctctggcaacttcatcggtgagcacaactgacaacagtagtaacattttttgtcgctgtagcatttcaagcaaagtaactagatactgcacagtagttacttactactaccttcagttaccgaaaaatttgactgaatttgggttctaccacagttcatatctcgccgggatcgctgcccaagggccttcactcgctcgatctgtcgcggaacaagatcgccaacatcgaggggctccgggagctgaccaagctgcgcgttctcaacctcagctacaaccggatctcgcgcatcggccacggtaaccgcacatcttgcctcaccaatgtcacaatcttcagagtatcctgcatgtccaaaccctccaaattttaccctctcactagtagaattacaattttcagactataccaagtactgagtagagttcctttttccctgtggagtgatgagtgatagggacaaagattagagtttttaatctgtagcatctagtagctgacaaagccagtctggaccagaacaaaatgagcattccaggacatgtcacgttggttctagcatgaatctgcttcatgtattggctgtcactgcctcgtctgtccacagtttccgtgatccaggaacattattaatacagttggaaatggggccttatcatcatcatcatgatcaaatccctgtccctgacttctgtccatccataccctggatgtaaaagtgcactcctccataattccaacctggtccatgcatccactgaatccactgctccctaatgatctcaacttaattctctgaaaaaaaaatcaattcagagcatgactctgttttcacttgagaagaatcttgctgaaaacctgccactttggaaatgaaaaataaaaaaaaaagaaaatctctgcactgcaagtctgcaactgcatctacatgactctgcatttcttcagattttgcaatcttgagaagaatcaagttctaaccatgcaacttcggaaagaaaaagaaaaagaagaaaaaatctctacacttcaactacttcatctacatatgactcttgagaagaatcaagctcaaaccctgcaacttcggaaatgaaaagaaaaagaaaaagaaagaaaatatttacactgcaactacttcatctacatgactctgaatttctttagattttgcaatcttgcccagaattgttcaaaacctgcaactttggaaaccataaaaaaaaataatctctgcactgaaagtctgcaattgcatctagatgactctgaatttcatcaggttttgcgaaatctttcagagatgagatgatcattcatggcggctgactttgtgaatctgaacctggcagggctgtcggggtgcacggcgctgagggagctgtacctggcggggaacaagatcagcgacgtggaggggctgcaccggctgctgaagctggcggtgctggacctggggttcaacaaggtcaccacggcgagggcgctgggccagctggtggccaactaccactccctccgcgccctcaacctcgtcggcaaccccgtccaggccaacgtcggtgacgacgccctccgcagggccgtcacgggcctcctcccccacctcgcctacctcaacaagcagcccgtcaagccccgcggcgccgcccccgccgacggcgccgtgtcgcgcgccgcgctcgaggccggcggcgccgggggaggctcccgtagcgcgcggaagcggtcgtccgctgcggcggcgtcgcggaggctggggcagcgcggcgaggggagcgggagcgggaggagcaggtccaaggggaggcagccgtcgagcagcttgccggcgaggaggtgaagacggcggcggcggcggcgagtgcgaggtccattttgtgttgttgcgatacattcgaatttagaatttgaagatcttttgaatttggaatttggattggagagagagagcgtatgtattgctgcgggtgtgaagtttgactgaatattgttgttcagtttgcaaattattacagtgcatcattgcagctaatagtaggtgtgtgtgatgatgagtggaaaatgatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0376200, RefSeq:Os10g0376200