Os03g0855100

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Revision as of 13:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0855100| Description = Similar to WRKY transcription factor 12| Version = NM_001058476.1 GI:115456680 GeneID:4334831| Length = 4658 bp| De...")
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Gene Name

Os03g0855100

Description

Similar to WRKY transcription factor 12

Version

NM_001058476.1 GI:115456680 GeneID:4334831

Length

4658 bp

Definition

Oryza sativa Japonica Group Os03g0855100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36889896..36894553

Sequence Coding Region

36890088..36890599,36891275..36891418,36893779..36894286

Expression

GEO Profiles:Os03g0855100

Genome Context

<gbrowseImage1> name=NC_008396:36889896..36894553 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36889896..36894553 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatatgatggaggaggaggctgccaacgccgccactgctcaagctgctgctgctggcgacctcgccgacgtcgtggcccgtgccaatgcacgcgcattcctcgtctccacccctcaccatcacccctcacctctgcatcctcttcctcctcctcccatgcctcaggcgcctcaccaatactatcccgccccccagatcaccatcccttaccaccaccaccaccacggagagcttcggcgccctaccaccatcgcttacaccgacgcacctgtgccgttcgagacggcggggccgccatccacggtcgtcgactcataccaccacctcacacccggcgacgccggctacgggatgccgcggccgcttgctctccagatctcccagcacgccctctgtggcggcggcgacgtggtgatgggcggcggaggcgcaggcgctgccgatgatggagaagaagccatcaggatctcgccactgacgccgtctgctcatcatcaaatgatgaaaaggaagaatgaggtgaagaaagtggtgtgcatcccggcgccgccagcgacgagtagccgtggaggtggaggagaggtgatcccgtctgatctatgggcatggaggaagtacggccagaaacccatcaaaggctctccttatccacggggttactacagatgcagcagctcaaagggatgtatggcgaggaagcaggtggagcgcagccgcagcgaccccaacatgctggtgatcacctacgcggcggagcacaaccacccatggccgatgcaacgtaatgtgctcgccggatatgcccgttctcatcacagtactcatgctactgcctccagcagccgccacaagcaacagcagcagcagcagaccaaccagctgcagcctgcactgatcacaagctcatcgtcttcttcctcctccccattcaatctctacgccgacgtcgtgctcggtggccaacaggccaacatgatgatgacgacggagggcgccggcgctggacttggcatccaaccttcagcagctgatgaggtctttgcagagctggaggagttggagcctgataatcctactatgatcaatgcaaacatgcaggtgtactccaccaccagcaggccaggggtaagcagctatgatcatcagtggcacaagttctaa</cdnaseq>

Protein Sequence

<aaseq>MDMMEEEAANAATAQAAAAGDLADVVARANARAFLVSTPHHHPS PLHPLPPPPMPQAPHQYYPAPQITIPYHHHHHGELRRPTTIAYTDAPVPFETAGPPST VVDSYHHLTPGDAGYGMPRPLALQISQHALCGGGDVVMGGGGAGAADDGEEAIRISPL TPSAHHQMMKRKNEVKKVVCIPAPPATSSRGGGGEVIPSDLWAWRKYGQKPIKGSPYP RGYYRCSSSKGCMARKQVERSRSDPNMLVITYAAEHNHPWPMQRNVLAGYARSHHSTH ATASSSRHKQQQQQQTNQLQPALITSSSSSSSSPFNLYADVVLGGQQANMMMTTEGAG AGLGIQPSAADEVFAELEELEPDNPTMINANMQVYSTTSRPGVSSYDHQWHKF</aaseq>

Gene Sequence

<dnaseqindica>193..704#1380..1523#3884..4391#aatcgagctggtagtagccggccagtagcactgtgagtgcgtgcactactagtgctcctgcaggcaaggctggacgggagtgggagtgtgtgtaccagtactagctactagtgaatactgaataggcagcagcaacagcagcagcagctaattaagcatcagacagaaactagaaagagcgagcacgccactatggatatgatggaggaggaggctgccaacgccgccactgctcaagctgctgctgctggcgacctcgccgacgtcgtggcccgtgccaatgcacgcgcattcctcgtctccacccctcaccatcacccctcacctctgcatcctcttcctcctcctcccatgcctcaggcgcctcaccaatactatcccgccccccagatcaccatcccttaccaccaccaccaccacggagagcttcggcgccctaccaccatcgcttacaccgacgcacctgtgccgttcgagacggcggggccgccatccacggtcgtcgactcataccaccacctcacacccggcgacgccggctacgggatgccgcggccgcttgctctccagatctcccagcacgccctctgtggcggcggcgacgtggtgatgggcggcggaggcgcaggcgctgccgatgatggagaagaagccatcaggatctcgccactgacgccgtctgctcatcatcaaatgatgaaaaggtttggcatgctagctagctcttaacattattaattagttctctaattaattggattcatatttcgatcactcctcttcttccttaatgtatacacatcttggtccttccttcaattgatgatttgcatccctctgatcgatcccggctttgtgttaccgcttctttttatcactttgatctttttattagttcatgcatgtgtgtgtgtgcagatatctttggctctcattttcagcattcctttcgatccattacatatactgacagattatatatatatgagtcgtcattaattctgacttcatcacctttaagcaagctagcaggatttcatggattggcatttgatgcttgcaccccctacccatatcgccaaattaatattaactcgatcttactcttctcagagttttactcctcgcatatggccgttttcagtattaatgctcatatctagcaactgtacatgtacacataactctttgacaggtttggaactaaatcatacttgacttcagttcctcctaatttgcttttcacgtttctctaatgagcgaggaatacttacatcaatcgatttccaattaatcaaaagtcttaactatttagtgttagtttattttcaagcaattaattaattacttgcttgcatcctttggcatatatactacaggaagaatgaggtgaagaaagtggtgtgcatcccggcgccgccagcgacgagtagccgtggaggtggaggagaggtgatcccgtctgatctatgggcatggaggaagtacggccagaaacccatcaaaggctctccttatccacggtaaaccggccacattttcatctgtttcttcccctctttttttttttaacacgcgctcacttaatcgatctgttcatatatatcttgtacctaatgacccgattcatacatgaagtttatttgcatcaagatctcatcaaatatctttcaatcattcctattcctcccattcttgataaacaattaatcactttctgcataaatatttttatacttaatgaccgatccaatttatacgaagtttattggaatcaagagatatctcatcagatatatatgtttcgttcattcctattgtgtgcttactgcttagttatattatgttccctctaggtattaattatattcattttatattatgtaagttcattaatatttattgctcatatctctgcaggtactgtatctctgggcaaaagcatcaaaatcatggccatccttttttataagctaattaactaaaaaacaagcagcttccatatttcttgtttagacaatttcaattggtttgtcataattaaacaacttttgaaatatatatatactgatcccctatgagtccaagtgtaagccatcttagccttttttaaactctaaaagtatgttgtttcaaaatttgcaggcatcttttaatttcaacttatatttatggtttcggtgtaaaaaaacttatatttatggtttctcttgccaaataaattatatttttctcataaataaactaccaatattttccaaaacaatataaataaagggtaacaaaagtcgcttgagctatttttttttaattcttgcacataagttttaaatggcttacatatggaataaggaagtacatatatatctgtacaccccccccccccccccaattttcaattcaaacaacattttttgttagtaagccacaactttgggtttattacttagctagattacatgaagttccccattatttgcttgttggcttataagtcattgacacaatttaaattgagttaattgcactttggtccatcttttattaccaaagtttcactttttgggctaccctctagctaatattttcactttagactaggtaagattatctttgttgcagtttggaccaccccaagtcacttttctagtgcatctaccctctaatcttgtgaataatagtctacatgtgagccaggaagttagcggtttatgggtgttgatgtggttaaagtcatttatgtgctcgagaaaagtttttgggatggttcaaagtgaaacaaaggcaaactaatctagtccaaagagaaaagatgttttaaagggtagttcaaagtgaaactttggtgataaaaggtcatttactcatttattttaaagttaattttaaattatcctccttttttattttaaacttatttccaaccttggctttttaccactaatggtataaatagtatataaaaggcctaacctaaaattattttcggttgcttcgtttacttttgtataacttatcagccaaagccaaccaacgtgaatagaacccaaaattaatttactgcacaatacacatttaatataccaaatctccaatgatccaaatcaagtatacaaaacatttcttttagaaaaataattcgacagcatcataatagacaatatgcttgtctattattgattaattatttgtgtagtgttgggtttcaaacttccaatggcacttgaacgacctaataagggtttggatggatatgtatggattaatcaaacgtatataatcacttcagattgtgtcggagtttcaacattgtaccgtctgaaggttatatatacacctatgcccaagcaatccctaaaatgtaaatctatcatcaatgaattcttccatatatacatggggatctaataagtgattcatcacaattatgacccaatgtagtgtcatttgtgagaaactaatactcccaattgcaaattgcgtaaatcaaacattattaattgttgaaatagtagatattgcaagactgccacaaattaagttgcttttacttttgaggcaaaaattggaacaaaatagctatgtttgccgttttcaaattaatttaaaaggtaaaaatgaaacttcaagtacagggatcgataagcttaatttactcacaattaattaaatttctcgatgaattaacaattattctggcttagtggactcagtttgacattactgtgccatcttcaaatttgatcaaaccattcatacactgcattctaagggtatatatatatctaggcacaataattttatatatatgcggttgatcaggaaattaattaaaaaataataattcactgatgagttgattttgtgggcggtgatgatgcaggggttactacagatgcagcagctcaaagggatgtatggcgaggaagcaggtggagcgcagccgcagcgaccccaacatgctggtgatcacctacgcggcggagcacaaccacccatggccgatgcaacgtaatgtgctcgccggatatgcccgttctcatcacagtactcatgctactgcctccagcagccgccacaagcaacagcagcagcagcagaccaaccagctgcagcctgcactgatcacaagctcatcgtcttcttcctcctccccattcaatctctacgccgacgtcgtgctcggtggccaacaggccaacatgatgatgacgacggagggcgccggcgctggacttggcatccaaccttcagcagctgatgaggtctttgcagagctggaggagttggagcctgataatcctactatgatcaatgcaaacatgcaggtgtactccaccaccagcaggccaggggtaagcagctatgatcatcagtggcacaagttctaataattaaaccatgcagtacctatatatatatatatcagaacttcaatattcgagagaggagatcagaggaaattgaattctagcacgtacaattaatacatcatgactatgcaaaatttacatatatatgatatgatggtcgcctgtgcgattattagtgaccaaattaaagattgtcagagatataggcgtgtacttacgcttatatgtatcacgctgaggtatactgtatttacaagaagataaataaaatatccatatccctct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0855100, RefSeq:Os03g0855100