Os03g0856000

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Revision as of 13:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0856000| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001058480.1 GI:115456688 GeneID:4334835| Length = 1551 ...")
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Gene Name

Os03g0856000

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001058480.1 GI:115456688 GeneID:4334835

Length

1551 bp

Definition

Oryza sativa Japonica Group Os03g0856000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36954302..36955852

Sequence Coding Region

36954441..36955529

Expression

GEO Profiles:Os03g0856000

Genome Context

<gbrowseImage1> name=NC_008396:36954302..36955852 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36954302..36955852 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgttgggagaagaagccaaggaatctgggtggctcgctgccggtgcccaacgtgcaagacctcgccgcccgcccggaccacctcacgcccaccctcctccgccgctatcttcgcccgcaccacctgtccctgcccgccgacgaccaccatgccatggctatgatacctgtcgttgactttgccaggctcatcgatcaccatgaggaggccgccaagctgaggcacgcctgcgaggagtggggtttcttccaggtgatcaaccacggaatcgccgacgagacggtggaggagatgaagcgcgacgtcatggccttcttcaacctcccgctggccgacaaggcggcgttcgcgcagcagccggaatggatcgagggctacggccaggcgttcgtcacgtcggaggaccagacgctggactggtccgacctctacttcctcaccacgcagccgcccagctaccgcgatctccgcttctggccaccggagacatcctccaccttccgccgctccatggaccgctactccctcgagacgcagcgggtggccaccgagctcctccgagccatggcgcgcaacctgggcctgcgcgacgccgacaagatgacaaggctcgccgcggcgcagtccatgcggatgaactactacccgccatgcccggccaaggagagggacagggtcctgggcgtgtcgccgcactcggacgccgtggggctgacgctgctgctgcaggtgagcccggtgaaggggctgcagatcaggaggggcgacgactggatccccgtcgaccccatccccggcgcactggtggcgaacgtcggcgacgtggtcgagatggtgacgaacggcaggtacaagagcatcgagcaccgggtggtggtggacgcggcgcaggagcgggtgtccgtggcggcgttccacaacgccacgttcgggtcgacgtacggaccactggaggagatggtgggaggcggcgaggcgcgctaccggagcatcagcgtggaggactacgtcaggctcgtcgtctccagcaagctccagggcaagaacatcttggacgctgtcaagattattactacgacttaa</cdnaseq>

Protein Sequence

<aaseq>MECWEKKPRNLGGSLPVPNVQDLAARPDHLTPTLLRRYLRPHHL SLPADDHHAMAMIPVVDFARLIDHHEEAAKLRHACEEWGFFQVINHGIADETVEEMKR DVMAFFNLPLADKAAFAQQPEWIEGYGQAFVTSEDQTLDWSDLYFLTTQPPSYRDLRF WPPETSSTFRRSMDRYSLETQRVATELLRAMARNLGLRDADKMTRLAAAQSMRMNYYP PCPAKERDRVLGVSPHSDAVGLTLLLQVSPVKGLQIRRGDDWIPVDPIPGALVANVGD VVEMVTNGRYKSIEHRVVVDAAQERVSVAAFHNATFGSTYGPLEEMVGGGEARYRSIS VEDYVRLVVSSKLQGKNILDAVKIITTT</aaseq>

Gene Sequence

<dnaseqindica>140..1228#ggtgaccagctagctgatagctgagtcaatttgtgtgacttaatttgcgaccacgtagcagtatatgtatagtattagtatagccccgaagttagttgaagacctcttggagtagagatcgaggaagaagaaataatcaatggagtgttgggagaagaagccaaggaatctgggtggctcgctgccggtgcccaacgtgcaagacctcgccgcccgcccggaccacctcacgcccaccctcctccgccgctatcttcgcccgcaccacctgtccctgcccgccgacgaccaccatgccatggctatgatacctgtcgttgactttgccaggctcatcgatcaccatgaggaggccgccaagctgaggcacgcctgcgaggagtggggtttcttccaggtgatcaaccacggaatcgccgacgagacggtggaggagatgaagcgcgacgtcatggccttcttcaacctcccgctggccgacaaggcggcgttcgcgcagcagccggaatggatcgagggctacggccaggcgttcgtcacgtcggaggaccagacgctggactggtccgacctctacttcctcaccacgcagccgcccagctaccgcgatctccgcttctggccaccggagacatcctccaccttccgccgctccatggaccgctactccctcgagacgcagcgggtggccaccgagctcctccgagccatggcgcgcaacctgggcctgcgcgacgccgacaagatgacaaggctcgccgcggcgcagtccatgcggatgaactactacccgccatgcccggccaaggagagggacagggtcctgggcgtgtcgccgcactcggacgccgtggggctgacgctgctgctgcaggtgagcccggtgaaggggctgcagatcaggaggggcgacgactggatccccgtcgaccccatccccggcgcactggtggcgaacgtcggcgacgtggtcgagatggtgacgaacggcaggtacaagagcatcgagcaccgggtggtggtggacgcggcgcaggagcgggtgtccgtggcggcgttccacaacgccacgttcgggtcgacgtacggaccactggaggagatggtgggaggcggcgaggcgcgctaccggagcatcagcgtggaggactacgtcaggctcgtcgtctccagcaagctccagggcaagaacatcttggacgctgtcaagattattactacgacttaatttctcatcttatcatgcctgctgattaatcaatcaatcaatctccctggttggttggttgctgccgagtaaactattcatgccacttcaattattagtaggtaaaaaggatctatcatgcatactactttccgtttttattggagtaaggtttatataggagtacctttgaataaacaaacaaatctcgtctactttgatgtaaaggtttgttgtatatgaggtttgcttcattgtacgctacagttgcctgagtatacggctaatgtacatgtgtcttgctacataaacaattagtaattacaaggtacacaagctttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0856000, RefSeq:Os03g0856000