Os03g0857400

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0857400| Description = contains InterPro domain(s): IPR010978| Version = NM_001058490.1 GI:115456708 GeneID:4334845| Length = 2377 bp| Def...")
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Gene Name

Os03g0857400

Description

contains InterPro domain(s): IPR010978

Version

NM_001058490.1 GI:115456708 GeneID:4334845

Length

2377 bp

Definition

Oryza sativa Japonica Group Os03g0857400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37031371..37033747

Sequence Coding Region

37031666..37031732,37031872..37031969,37032080..37032190,37032281..37032329,37032518..37032594
,37032853..37032909,37033058..37033158,37033245..37033659

Expression

GEO Profiles:Os03g0857400

Genome Context

<gbrowseImage1> name=NC_008396:37031371..37033747 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37031371..37033747 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgatggcctccgaggcgtggctgtcgccggcttcccgcctcttccaccctccccgctcctccaccgccgccttcttctccgcttccgggctcccccgcctgcctcgccgctcctcctgtgcactcgcaacctccacgcgtgggcggcgcctccgccttggcgccaccgatcagcagcagcagcaaggcaaacaagatggtgatgaggttgtggacagcaacgtgctccagtactgcagcatcgacgggaaggggaagaaggccgagaagaggtcgctgggtgagatggagcaggagttccttcaggctcttcaggccttctactacgaccagaaggccatcatgtccaacgaggagttcgacaacctcaaggaggagctcatgtgggaaggcagcagcgttgtcatgctaagccctgacgaacaacgcctgctcgaagcctccatggcctatgctgccggcaaccccatcatgtctgacgctgaattcgaccaactcaaactcagattgaagaaagacggaagtgacattgtcaccgaaggtcccaggtgcagtctacgcagccgaaaggtgtacagtgatttgaccgttgactacctaaagatgttcctgctaaatgttccagcaactactcttgctctaggactgttcttcttcatcgatgagttgactggctttgagatcaacatattccagctgccagagcctttcggtttcattttcacatggtttgctgctttgcctctaatattgttcatagcacagtcgataactaatgccatagtgaacgacttcttaatcctcaaggggccatgtccgaattgtggcgctgaaaacctttccttcttcgggactatcctgtcagtgtctagtggcggtgaaacaaacaaagtgaaatgtgcagattgtagcacggagatggtatatgactcgaaatctcggctcatcacccttccagaaccatcgcaatga</cdnaseq>

Protein Sequence

<aaseq>MLMASEAWLSPASRLFHPPRSSTAAFFSASGLPRLPRRSSCALA TSTRGRRLRLGATDQQQQQGKQDGDEVVDSNVLQYCSIDGKGKKAEKRSLGEMEQEFL QALQAFYYDQKAIMSNEEFDNLKEELMWEGSSVVMLSPDEQRLLEASMAYAAGNPIMS DAEFDQLKLRLKKDGSDIVTEGPRCSLRSRKVYSDLTVDYLKMFLLNVPATTLALGLF FFIDELTGFEINIFQLPEPFGFIFTWFAALPLILFIAQSITNAIVNDFLILKGPCPNC GAENLSFFGTILSVSSGGETNKVKCADCSTEMVYDSKSRLITLPEPSQ</aaseq>

Gene Sequence

<dnaseqindica>2016..2082#1779..1876#1558..1668#1419..1467#1154..1230#839..895#590..690#89..503#acatctctctctctcgcttctgccactgctggctgtgctgcttccctagctcctcggttggatcaaagagaagagaagagaagagttaatgctgatggcctccgaggcgtggctgtcgccggcttcccgcctcttccaccctccccgctcctccaccgccgccttcttctccgcttccgggctcccccgcctgcctcgccgctcctcctgtgcactcgcaacctccacgcgtgggcggcgcctccgccttggcgccaccgatcagcagcagcagcaaggcaaacaagatggtgatgaggttgtggacagcaacgtgctccagtactgcagcatcgacgggaaggggaagaaggccgagaagaggtcgctgggtgagatggagcaggagttccttcaggctcttcaggccttctactacgaccagaaggccatcatgtccaacgaggagttcgacaacctcaaggaggagctcatgtgggaaggcagcagcgttgtcatgctaagtaagtactactccttccatctcttctgcggatacctatctgttagtatcttctttgcccactaattaacactaatatcttttcaggccctgacgaacaacgcctgctcgaagcctccatggcctatgctgccggcaaccccatcatgtctgacgctgaattcgaccaactcaaactcagattgaaggtcgcttaattcaactaactaattccttccttccatgctactcttactgctactgctactgtactctcactaaaatatttaccagtactagctgctacgtagtttaatttcttttctgactggctgctcttattatattatatgctagaaagacggaagtgacattgtcaccgaaggtcccaggtgcagtctacgcagccgaaaggtaataaaaattactccgatcctcttatactgatacaacactatattctaagcctgcctatgggctttctggagcaacaaaatatggaaacataatcctgtacaacaaattcatgaccaaaaccaccaccattcatacaacaaacctgtcaaaacacacatacaacactcatctccatgcatcttgctcatttaaatttactgacaaattaaaagggcctttttctgactatttatttatttatgctacctggcgcaggtgtacagtgatttgaccgttgactacctaaagatgttcctgctaaatgttccagcaactactcttgctctaggactgtgagttcttttcatctcactcttgcttccttccaatatacctagctagtatgaaataaatattggactgtcagtataccttttactgtccattgtcctggtgggatttgaactggttgcgacgaattcatcctttatcagactttacttatgtttgtcacctctaatttcgatttgcatgcatttaggttcttcttcatcgatgagttgactggctttgagatcaacatattccaggtaaattctttttcctttcttccaattaattattcgactgactatttgacatgtttttccccactcggtaatctttatgaacaaatgcagctgccagagcctttcggtttcattttcacatggtttgctgctttgcctctaatattgttcatagcacagtcgataactaatgccatagtgaacgacttcttaatcctcaaggtattatttttagtctcctctctgcttgtctgcttttttgcattagacattagacatcaaatatgattatttgttcaagtgaagtgatgattattctctgggcaatccaggggccatgtccgaattgtggcgctgaaaacctttccttcttcgggactatcctgtcagtgtctagtggcggtgaaacaaacaaagtgaaatgtgcagagtatgtattatattctcctatacttttatatgtacatattccatcattgttgattgtgtataatatagtactgttcgagttacaaatataatactacaatttgtgtcaatctgaaaatgtgcaactctttgttttgcagttgtagcacggagatggtatatgactcgaaatctcggctcatcacccttccagaaccatcgcaatgaaatgaatggtgaattcttcaaggtacgatgccagatggagagatgcaaacaaggaggtgatcaggtaggaaacaacaaataaaatggaattattgtaacggatgggtgttcacaaattgcatgcagagtgtatatatactacagtaagaaatgtagatcgacttctatactactaactattaagcgctgttgtgtacagtatataaaatgtagtacatacatgtttactgatatctgactcaactgaaatactacacacatatgtgtgttggagatagaaactgttttgtctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0857400, RefSeq:Os03g0857400