Os03g0858400

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0858400| Description = WD40-like domain containing protein| Version = NM_001058496.1 GI:115456720 GeneID:4334851| Length = 4218 bp| Defini...")
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Gene Name

Os03g0858400

Description

WD40-like domain containing protein

Version

NM_001058496.1 GI:115456720 GeneID:4334851

Length

4218 bp

Definition

Oryza sativa Japonica Group Os03g0858400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37079488..37083705

Sequence Coding Region

37079573..37079803,37080327..37080432,37080679..37080739,37080825..37081120,37081201..37081340
,37081427..37081501,37081591..37081681,37082224..37082427,37082956..37083000
,37083292..37083377

Expression

GEO Profiles:Os03g0858400

Genome Context

<gbrowseImage1> name=NC_008396:37079488..37083705 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37079488..37083705 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcgagtctggtgtccctgcccctcctctcggccatcttcggcgccgccatcgccctcctcttcctctccggatacctccgccgcaagcgcgccgccatcgcccatctccccccttccgccaccgccgccgccccggaccagcccaagcaagttcgaccatccaaccagaaccagcctaagaagggacaccagcgatctcaccacgccgtcgataaggacgccgcaaaaaagcaccatcatcttgatgtcaacactttgagggggcatactgattcagtcacagcacttcatttctccgatgatgcctgcaacctggccaccgtatgtgcggatggagctgtcagagtattcagggttgatgatgtctcaagcaagagctttaaaattctgaggatcaacttgcccgctggggcacatcctacagctattgctttctcacaaggggcatcatcagttgttgtggcagcgcaagcacttttaggctcatctctctacatgtatgcggatgttggtgctcctccagctggcggaaacaaacagcagggcaagctttctccccctgagataaagtgggaacaccgtaagattcacggcaaggagtcagtgctgaatcttgcggcagctcgtgcaacctatgggactggtgatggcagcacaatattgatttcttgctctgaagcaactgatatcaaaatttggcatgggaaaagtggaaaggagttgggaacagtcgacaccaatcaattgaaaaataatatggctgatatatccccaaatggccgtttcatagctgctgcagcttttacagctgatgtcaaggtgtgggagattgtttattcaaaggatagctctgtgaaggaggtcaataaagttatgcaacttaagggtcacaaaagcgctgttacttgcctgtgtttcgctctgaattctgagcagattattacagcttccaaagatggtacaattcgagtatggaacattaatgtaaggtaccatcttgatgaagaccctaaaaccttgagagttttgccaattcctctccatgattcaaaaggttctgtttgccagtatgatcacatgagtgtatctcctgatgagaaagttctggccacgacaagtggatcaacgctgcaatggttatgtgtggaaactggtgcagttcttgatacagctgagaaagcacatgaaggtgatataactggcattgcctgggctccacgaacaattccaaatggtggaactcctgcttttgttttagcgactgctggagtggacaaaaaggtgaagctgtggttagctcctaaggctatttcaacctga</cdnaseq>

Protein Sequence

<aaseq>MAAAAASLVSLPLLSAIFGAAIALLFLSGYLRRKRAAIAHLPPS ATAAAPDQPKQVRPSNQNQPKKGHQRSHHAVDKDAAKKHHHLDVNTLRGHTDSVTALH FSDDACNLATVCADGAVRVFRVDDVSSKSFKILRINLPAGAHPTAIAFSQGASSVVVA AQALLGSSLYMYADVGAPPAGGNKQQGKLSPPEIKWEHRKIHGKESVLNLAAARATYG TGDGSTILISCSEATDIKIWHGKSGKELGTVDTNQLKNNMADISPNGRFIAAAAFTAD VKVWEIVYSKDSSVKEVNKVMQLKGHKSAVTCLCFALNSEQIITASKDGTIRVWNINV RYHLDEDPKTLRVLPIPLHDSKGSVCQYDHMSVSPDEKVLATTSGSTLQWLCVETGAV LDTAEKAHEGDITGIAWAPRTIPNGGTPAFVLATAGVDKKVKLWLAPKAIST</aaseq>

Gene Sequence

<dnaseqindica>86..316#840..945#1192..1252#1338..1633#1714..1853#1940..2014#2104..2194#2737..2940#3469..3513#3805..3890#gtcatcagtagagtagcacacaaaccaaacccaattttaccctaaacccgagagagagagagagagagagagagagagagagatcatggcggcggcggcggcgagtctggtgtccctgcccctcctctcggccatcttcggcgccgccatcgccctcctcttcctctccggatacctccgccgcaagcgcgccgccatcgcccatctccccccttccgccaccgccgccgccccggaccagcccaagcaagttcgaccatccaaccagaaccagcctaagaagggacaccagcgatctcaccacgccgtcgataaggtcattcctcatgcccttatctcaatcaaactcaaaactattagtgtataacattatcatatcatactagtagtagtagtatttagctctctctttccgatatcagatccgatccctccgttcgtgctgcccttgtcgagtgtcgaccgtgccaatttgttactattacttaccactactagttaagctagctattacccgctcccaatcacttgtagcctagccatataacgttttattacgctcaatctgccacaatatttcctttttctttattattactaccgcctatatactagtactatcttccacccacgactttaaatgtaacctcattgctgcttgcaaattccgtaatctgagttaccaaatttgatatgtttatccattataaattttaggcattacacgcacaagcctccttactatttcattcctctccgaaaatgtcatattactgtatttctttcttgtcggcaaatttcatataaccgtcattgatctcaacatgattttcttttaggacgccgcaaaaaagcaccatcatcttgatgtcaacactttgagggggcatactgattcagtcacagcacttcatttctccgatgatgcctgcaacctggccaccggtcagcttttttccgctctactttctcaacaccatattaccacgaggcaggacctctcttgtttcgtgtcctgcctttcttattttctcatcttatatcatgcctcatgttttgttgtttctcattgctaacaaatcaaagttggcaccacacatacagtttaccatatttcacttcatcaaccaagtgtgattgctactccaaattctaatgtctacatctataactttctgcttcctgttgcagtatgtgcggatggagctgtcagagtattcagggttgatgatgtctcaagcaagagctttaagtaagattttttttttaattctgcacgaattattctttcttattacttccttatgctggagtatgagattatgggggttttgcagaattctgaggatcaacttgcccgctggggcacatcctacagctattgctttctcacaaggggcatcatcagttgttgtggcagcgcaagcacttttaggctcatctctctacatgtatgcggatgttggtgctcctccagctggcggaaacaaacagcagggcaagctttctccccctgagataaagtgggaacaccgtaagattcacggcaaggagtcagtgctgaatcttgcggcagctcgtgcaacctatgggactggtgatggcagcacaatattgatttcttgctctgaaggtatatgccattaagttgtgcacgctacatggatttccttttatctcacactaaggttgatattttgagttgtcatgcagcaactgatatcaaaatttggcatgggaaaagtggaaaggagttgggaacagtcgacaccaatcaattgaaaaataatatggctgatatatccccaaatggccgtttcatagctgctgcagcttttacagctgatgtcaaggttagttttgctgttattttgaagaactatagcatatccttgccaggatatccgggcaatataacttttcccatttatttgagtaggtgtgggagattgtttattcaaaggatagctctgtgaaggaggtcaataaagttatgcaacttaagggtcacaaagtaagacccccccttgtcttgttggacgtgttacgaatttatttgcatgttctgaatcatatgagaagctgacggtctccttttttcagagcgctgttacttgcctgtgtttcgctctgaattctgagcagattattacagcttccaaagatggtacaattcgagtatggaacattaatggtatgttctattattttaatcaaaatgttatgttctatgccgcttaccaccatatccttgatggcttgaagcaataagttgggattgggttcataaattgtaacagtaaaaacttgtttacttgaattctgaaagtgatcacggcaacaactcctatacttttgattttttttttcatttccacttattgaatgctcagtatgccaaagtgcatctatagttgtctttgtgcctgacttcacaaaagttgagaggacctatcattttttttaagtatcaaacctggttacgcaatcctctgtaatcaagtattcaagttgcttcccagccattctcatgccgttcctttctgttagatgctgtgctgattgatcactaccaaatgtttatacagaatgcacttatgaatttatacaaatgtcctgatgaaaataaatttgttcttggtattgccattatagaagtctatgcacaccttgtactgttctctttttctcagatactctccttcctcacaagttgatattctgtcaattttgtagtaaggtaccatcttgatgaagaccctaaaaccttgagagttttgccaattcctctccatgattcaaaaggttctgtttgccagtatgatcacatgagtgtatctcctgatgagaaagttctggccacgacaagtggatcaacgctgcaatggttatgtgtggaaactggtgcagttcttgatacagctgagaaagcacatgaaggtatgtgccctcttctttcttgatttgccagattggacactgtttttactactaaatggacctaataaattgttaaggagacggcagtaattaagatctgaatcacagaagatttgacactgtttatttttcttgtgaacctttttgtgtttgagtcacaacctatccttttcaacaatagtcccgagttgttaagaactgactaccatgggcaaatacatcatactctgtactctgtggtcaatgttcatgtgttattttccttttcaatgatcctgcagactacttgtagatcatggccatgaagtccatggattataccaatacttacttgcataacagatggtctcaactttgtgctgtcttcagaaatttgatcgtaatttagtatttagaattcaactacttttcactcgataaagttatgcagtgctgatacattaggctataatttacaccttttcctgttatgatctttgctagatatatgctgcaatcttacagtgatatgtttctttatgtaatcaggtgatataactggcattgcctgggctccacgaacaattccaaatggtaagaagtatgcaaaccgcgcgaacgaaatgtacatgtgaaattctttgaaatccaaaacgtttttctttgaagcttgtcctttttagccatatgcaaatgtaattcatattttagagctggtgcacttcatgtctcatgtcaacgcatcacttgtcgccatttacaaatatgcgtgttgctttttgctggaagatttccaggctgaggatactaggataaagctattgttggtccgagggagaagtgtttacagattctaaactgatcactgataatattttcttttaggtggaactcctgcttttgttttagcgactgctggagtggacaaaaaggtgaagctgtggttagctcctaaggctatttcaacctgaatgagtgtggttggatcctggtcaccctctacagcgcagattcggtgtgggcactgaaggaagagaaaaaaacgatgaaagataatgcagatatgttgcttgagttgagtccttactgacgggagtcgtcaaacataacatgcagagagagtttgtgaaggggagacactgcacttttctctaaatacatatctgtcaacattttggaaataggttgcctgctgctcacaattttcccttttcttgttagaacaaaagaaactagagtggaacttggaagtaacttatcgagttctcttgcattcagtatgcatatgttagttactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0858400, RefSeq:Os03g0858400