Os03g0858700

From RiceWiki
Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0858700| Description = Protein of unknown function DUF1499 family protein| Version = NM_001058498.1 GI:115456724 GeneID:4334853| Length = 1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0858700

Description

Protein of unknown function DUF1499 family protein

Version

NM_001058498.1 GI:115456724 GeneID:4334853

Length

1988 bp

Definition

Oryza sativa Japonica Group Os03g0858700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37093846..37095833

Sequence Coding Region

37094383..37094434,37094555..37094670,37094899..37094991,37095148..37095223,37095302..37095427
,37095504..37095560,37095679..37095800

Expression

GEO Profiles:Os03g0858700

Genome Context

<gbrowseImage1> name=NC_008396:37093846..37095833 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37093846..37095833 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgccgccgtgttgtgtgctagtggtacgctgctgttccggatccctcccttcgccgccgccgccgccgccgcccagaccctctccctccaacaacctcagaatcgccagaagagagtttgtgctgaggagcagtgagctcgccacgctcgctgccatcttccacttgagcggcacgaagccaaggtacctgggcgtgcagaagagtcctccatcgctggctctgtgccctgccaccaacaattgcgtttccacttgtgaggacatcactgactccattcactacgctcccccatggaactataaccccaaggacggacgcagggctaaacccatcaccaaacatgaagccatcaaccagctcattcaagtcgtcacacaaacaaagcctgacaacttcactcctcgcctagtagagaaaacagatgactatgttcgagttgaatacgagagtcctatattcgggtttgtagatgatgtggagttctggttccctcctggtaacaaatccattgttcagtaccgatcagcatctcgatcaggattcattgacttcaacgccaacaagaaaagagtcaaggcgctcaggttggcactggaaaacaaaggctgggcttcagaaagcaccatctga</cdnaseq>

Protein Sequence

<aaseq>MAPPPPCCVLVVRCCSGSLPSPPPPPPPRPSPSNNLRIARREFV LRSSELATLAAIFHLSGTKPRYLGVQKSPPSLALCPATNNCVSTCEDITDSIHYAPPW NYNPKDGRRAKPITKHEAINQLIQVVTQTKPDNFTPRLVEKTDDYVRVEYESPIFGFV DDVEFWFPPGNKSIVQYRSASRSGFIDFNANKKRVKALRLALENKGWASESTI</aaseq>

Gene Sequence

<dnaseqindica>1400..1451#1164..1279#843..935#611..686#407..532#274..330#34..155#atctacacttgtacacaacactagcaaaccgccatggcgccgccgccgccgtgttgtgtgctagtggtacgctgctgttccggatccctcccttcgccgccgccgccgccgccgcccagaccctctccctccaacaacctcagaatcgccagaaggttaggggtattggcctgcttccctcccttgttctctcttctctggggtggcctggactgattgatttgggatttgtatcttcttcttcttctctctgcgactgatgatgaaatgaagagagtttgtgctgaggagcagtgagctcgccacgctcgctgccatcttccacttgaggtaggtagctaggttaattaggttcccttcagattagttgcgatggttaattaaggtgttgaaccaccatgttcagcggcacgaagccaaggtacctgggcgtgcagaagagtcctccatcgctggctctgtgccctgccaccaacaattgcgtttccacttgtgaggacatcactgactccattcactacgctcccccatggtatatatgctctcttcttccctctcaacatgcattcatatactagtggagtatatgctactaattcattacttttaggaactataaccccaaggacggacgcagggctaaacccatcaccaaacatgaagccatcaaccagctcattcaagtcgtaagtcatccatctgcatttctcttcctttctttttttttctttttttgtttgtttccacgtacatctaatctaactagtaataaaaaatagtatcctcgtgggaattaatcttcaatcatataagtatgttttatggatggtgtcaatcggcaggtcacacaaacaaagcctgacaacttcactcctcgcctagtagagaaaacagatgactatgttcgagttgaatacgagagtcctatattcggggtataattcattctaacaccttcttgctcttcattcagttcacccatcttcttagtctctactccctctatttcacaatataagtcattttagcatttcccacatttatattgatgttaatgaatctagatacatcaatatgaatgtggaaaatgctagaatgacttacatggtgaaacggatgaagtagttgatagtataattgatatatccacatgaactttgcagtttgtagatgatgtggagttctggttccctcctggtaacaaatccattgttcagtaccgatcagcatctcgatcaggattcattgacttcaacgccaacaagaaaagagtcaaggcacgcacgcacgcgcccaatatcgatcatttctattacggagtaggagtagtactcctatctatcattgtgttgatccatgtctcatgctctgttcgatccatctttccattgctgcaggcgctcaggttggcactggaaaacaaaggctgggcttcagaaagcaccatctgaacctaacctcaaggaagccaacccctcgagtctgtactggagtgtggattctaatccctcgagggatatcccctcgtatatctttttcttccaaattcgatgcaaatagttgtgaaaaattctaaaaaaaattgataatgtagagtataatgatacctactagtccaccaaaattcatgttcaaattcgatctacacatcgagaaacaaaaaagacaaatttagatataaacagtacgctattattcatacgctgaatttgtcttttttatatctcgacttgtgagttgagtttgaacttaagattttgtggagttgtatatatgtgttgtatgaatgttgtcaaatttttccagaatttttcataaccgtttagatggtttttgagcaaacaaggaaacatcccctcgagggattaaaatagttttcctctgtgctgtacagactgaccgaccgattggctggtacaggcactcttccttcctggcgcttttaattgcacatttctcctatccttaatggattagtagaccttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0858700, RefSeq:Os03g0858700