Os10g0377400

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0377400| Description = Similar to Ras-related protein Rab11D| Version = NM_001071011.1 GI:115481765 GeneID:4348493| Length = 4824 bp| Defi...")
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Gene Name

Os10g0377400

Description

Similar to Ras-related protein Rab11D

Version

NM_001071011.1 GI:115481765 GeneID:4348493

Length

4824 bp

Definition

Oryza sativa Japonica Group Os10g0377400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12305178..12310001

Sequence Coding Region

12305526..12305963,12309585..12309797

Expression

GEO Profiles:Os10g0377400

Genome Context

<gbrowseImage1> name=NC_008403:12305178..12310001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12305178..12310001 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggcggggagaaggtggactacgtgttcaaggtggtgctgatcggggactccgccgtcggcaagtcccagatcctcgcccgcttcgcccgcaacgagttctccatcgactccaaggccaccatcggcgtcgagttccagacccgcaccctcctcatcgaccacaagtccgtcaaggcccagatctgggacaccgccggccaggagaggtatagagctgtcacgagtgcatactacagaggagcattgggagctctcctagtctacgatatcaccaagcgccagagctttgatcacatccctcgctggctggaggagctccgtggccatgcggacaagaacatagtcatcatgctggttggcaacaagagcgatcttgaagacgagcgggccgtgagcaccgaggatgccaaggagtttgctgagaaggagaacctcttcttcctggagacctccgctctgcaggccaccaacgtcgagaacgccttccagaccgtcctgtcagagatattcaaaattcacagcaagaagaacatggcagcggacccaaaagcaaacggcgctgccccatcgctagcagggaagaaggtcgtcgtcccgggcccagcgcaggagatccccaagagcaagtgctgcagttccatgtga</cdnaseq>

Protein Sequence

<aaseq>MAGGEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIG VEFQTRTLLIDHKSVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIP RWLEELRGHADKNIVIMLVGNKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNV ENAFQTVLSEIFKIHSKKNMAADPKANGAAPSLAGKKVVVPGPAQEIPKSKCCSSM</aaseq>

Gene Sequence

<dnaseqindica>4039..4476#205..417#cgcgagcccgagttgcacggcaccaccaccgccttcttccttcactcgacccgaccgccgtctcgtccgtctcccccgcttcctccgcctccaaaacccccccatcccaacccgacctcctcactcgccctcccctcgcgcttcgcttcgctccgatccgaccgccgccgccgccgccgccacagcgagaagagagagagggagatggcgggcggggagaaggtggactacgtgttcaaggtggtgctgatcggggactccgccgtcggcaagtcccagatcctcgcccgcttcgcccgcaacgagttctccatcgactccaaggccaccatcggcgtcgagttccagacccgcaccctcctcatcgaccacaagtccgtcaaggcccagatctgggacaccgccggccaggagaggcaagcctctccccccccccccccccgccaaatctcgcaacaattccgctctccagatttcgatcctgctgtttcgcgtcatttcgttactgttcgttcatcatatcatttttctcccaattttttccggcgttcagatcgctggattagtgagctcctccgtgatacgcgcgccaattgattcaatgctagctggtgggcttacgtcacacttccatttagatcgtaggtagcagtagtagcgtacagcaacgcagcgagtggttggtagaggtggtacgacactacactagtcctagatctctgctccccgttggctgcaacggtcggggttagcttgcagtgcacactgctacctacctggtgattgggcagtgtgatgtgcgactcacctactctggagtctggatctgccctgaattatgctggtggggggtgtggtttactacatgcaaccacatttagttgcgtatgctgtcgaatttaggtgctcttgtatggtggtgggtggctgggtgggcaattgggcggatactaggagtactaaatatggagagtgcgtgtgcatttcggaagtatgtcgattatggttcatgtggttggttgtaatttgttggcacgtgaatctgacatagcgcccgatgaatgggggttattttgaattcgaagatgtccattgctgaactctgcacacttggtgtcctgtcctgctgtatataccaaaggtccatgggatgtttatatatgctttgacatgacccttaaatgtgattgtagttagtacttttactccctccgttttaggttataagactttctagcattgcccacattcatatatatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatgaatgtggccaatgctagaaattcttataatatgaaacggaggaagtacgtactttgatgaaaagaatttgttgtgcccgtgtgctctgtgttgtactcttttgataagcttaaccaatgcatggactgaggccagtgtcatgctccaacttaagctgtgtatttccttcaccaacaataactctcgtgttttagttatggctgattcattcctttcatgaagccacatcatctcaactgtttcggatctttggatgatcgatctaaggcgcaaaagcgcctagctgcacagcaaatcaacattgcacctcttgttagcattttatcatgttattttttcaagcaatttgaagggtttccatcacgtttcataagtattctagtccctagcaagtgtgcagcaatgtattcttttttgttctgatgacaccactatatccatcttagcagtcaggtacaatcttgtggacgatgataaagttagcaagttacatagttagccttatcaactatgttgatgcactgttcaactagcaagcatctgtgttcattcatgctactagcatattctgtcttttgagttccatacctgtgtttctacatttcacatttccactagtactaggtataaattgttataatcttcagtaataccttttctgtttgaggtatttgaaacattccctgaatcctgacattcttatagcatataaaattgtttatgccctgtatagcttaaccttttcaggacttgaatgtgctgcatagataaattcatatgttatcgtgtttaggaatatctaaattttggggacactggtacaaatatcatatggctatcaacatccagggatcaatatataagttaaaaactatttttctctgagctagttttttagctagttacttgtctcaactagacaggaacttgcctgcgaaattaaaacattgacaggtactaaccaagtccacttatcaattactactaaatctttgaacgcttggttgctcaaacagacatatggtcattcaagctggtcagattcatgaatagcttttccaaggcattttcactgaatgtcaccactggatatgtaaatgcactggctctttttttttttaccggaaccactgcaggggaggcccccgcagttaatatattatattaaaaagatcataagtacagaccaaaaactaaaattgcaatgcatggctcatttgccaacatgatcttcacggggaatggttggtcgcaatgcttgttccataatcttttgtttgaggaatgaactaaaactttggtgccacttttgttcagtgcacagtactttctttgagctatacacattccccttggtgtgtaactgcaaccagttcactctagtttagatgtctagctgatattaccataatatagttgttttttttttaattctggttgacataagagcaaggataatagtgagctataagcaagctatatgcttatgtggaagagagagataaacaaaagtggggagtgttggctcttatgcaagagctaactacacacaagctccaagaaatatgcattaaattcatagtgagaaagagagaggatgaaaaaaataaagataaccttatagctaacctattatacatgttagctttaacattgactaatactccctccgtcccaaaaaaagtgaatctaggactgaatgtgacatattctagtacaacgaatctagacatacaggatgtgtcacatccagtattacgttggttttttatgagatggagggagtagtaagtagtgagctctactattaaacttgctctaagccttgttgtttttactcagtaacatacatattgaaatattgaatttcacattcatatgccctagaagtgaaccaaggtttggagaacttgagtggagccagcctaaagtgcttttttttttctcttgaaatttgtctggaggtttattagttaatctcctaaggaagaactatttagttccaaagtttgatggttgttctcattcttatctaaaatatcttctatatcaaccaaactagagaattatctggttccctctctgtactgaccactttttgtgattttaaggtccatgacatcatcccaacttcattgctactgggtttttgagttgcccatatgtatttatgtacaattacctgcaaaatatctgtatggtggttcaatattttaatagagaatgagttatgatttgcaacagttttttttttcttctgaaatgttcccctaagccttcctacttttgatattctctataatcttgtcattgtattatttctgactactcaaatgtgtatccatggtaaccatagccttaaaattcttttatgctgcttcgtttgctttgttttccctgtcatttgaactgcattctgttctgcatttgagcacatgacacacaataggtgtgcgtgctgtattatccatgaaatcttagtcctgcactttagagaacttctctatttttactgtcatcatgtgaagaaacagtactccaagatcacagtgagacaaaatatatacgtattttctgtatatatgttgtagcactcaaaatgtgtgatgaattttgtggcagtattggcattcatctgttttgtctttctcatgtagcttacaaacttgtttctttcatgaacacaacttactaacctgtcatgcctatttacttcaactactgcaggtatagagctgtcacgagtgcatactacagaggagcattgggagctctcctagtctacgatatcaccaagcgccagagctttgatcacatccctcgctggctggaggagctccgtggccatgcggacaagaacatagtcatcatgctggttggcaacaagagcgatcttgaagacgagcgggccgtgagcaccgaggatgccaaggagtttgctgagaaggagaacctcttcttcctggagacctccgctctgcaggccaccaacgtcgagaacgccttccagaccgtcctgtcagagatattcaaaattcacagcaagaagaacatggcagcggacccaaaagcaaacggcgctgccccatcgctagcagggaagaaggtcgtcgtcccgggcccagcgcaggagatccccaagagcaagtgctgcagttccatgtgatcttactctactcagattcagctgtatttgtgtgcctctttttgagaattttcacgcgatctttctggatgtacatccctgctcaaatagctctaggctgcgagtattgttggactattggttgtttcggtgatcaggtggacgggatagcttagaatttgtgacattttgtcacttctctcagctggagtagggtgcgagcagaggagctctatttttcataggagtgggttaatttgtgggggttaattaccaatagccatgtatgccgattgttttacatttcttaaatcctttatgtattgttacacgtattactattaatatctacttgctgctatgacaccg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0377400, RefSeq:Os10g0377400