Os03g0861700

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0861700| Description = Rhodanese-like domain containing protein| Version = NM_001058517.1 GI:115456762 GeneID:4334877| Length = 5116 bp| D...")
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Gene Name

Os03g0861700

Description

Rhodanese-like domain containing protein

Version

NM_001058517.1 GI:115456762 GeneID:4334877

Length

5116 bp

Definition

Oryza sativa Japonica Group Os03g0861700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37227211..37232326

Sequence Coding Region

37227618..37227774,37227919..37228203,37228313..37228416,37228527..37228624,37229642..37229775
,37231054..37231181,37231849..37231902,37232025..37232282

Expression

GEO Profiles:Os03g0861700

Genome Context

<gbrowseImage1> name=NC_008396:37227211..37232326 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37227211..37232326 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcggccgccgtccaccgcttccttggcgtatttcccgccccgtcgacgcccacgcctccgcctcgacaactatcgcctcgcccccatcacattcctccttccctcgtccgatgttgttcctcgtcccccgtatgcgccgccacagttgcagttgcacaaccccaagagttcgtcgtcgtcaccttctataagttcgtctccatcgacgacccccgcgccgaggtgtccaggcacctccacttcctccagggccgcgacatacatggccgcatttacatgaacgagcagggaatcaatgcccagtacagtggtccacataaagatgcggtagcatatgcagactggcttagaaaagaccatcgatttcgtgatctacttgtccaaacttcaccatcgttatgtggccatgcttttcctcgcttgaaactgcgcatgcgtgctacaccattgactccatcagagtggagggaaagacttgaagctagaaaatgccttgatgtgtcatcgagtgaagcagctggagatagctctggaaggaggcttttgctcctcgatgtcaggaatgattatgaatgggatattggacattttcaaggagctcagcgacctaatgtggactgcttcaggagcacatcctttgggctctcagagtcagagcaggagatggattcttcagatcctctaaatggtatagacaaagaaaatacagatatattaatgtactgcactggtggcataagatgtgatgtgtattcaacaattcttaggaagaagggcttccggaacctgtatacattgaagggaggagtgtccaattatctgaaggaggaggggtctgcaggatgggtggggaatttgttcgtgtttgatggacggctctccctgccaccggcaacgtacaagcctggagcaggtgatgatgatgatgaggaggaggaggaggggagaaacagaagcagttcagagctggggagatgctatgcatgtgggtcagaggtggttgagttgaggcaccggaactgcgcaaacatcgactgcaaccggctttacctgtgctgcgggcgatgcgtggaggagctgagaggatgctgcggtgagggctgcaccgccgcgcctcgcctgcgaccgctgctgccatcacaccagagataccacaagtggcatctctaccgccatttggacctgggggcaccatcatctccatcctag</cdnaseq>

Protein Sequence

<aaseq>MAMAAAVHRFLGVFPAPSTPTPPPRQLSPRPHHIPPSLVRCCSS SPVCAATVAVAQPQEFVVVTFYKFVSIDDPRAEVSRHLHFLQGRDIHGRIYMNEQGIN AQYSGPHKDAVAYADWLRKDHRFRDLLVQTSPSLCGHAFPRLKLRMRATPLTPSEWRE RLEARKCLDVSSSEAAGDSSGRRLLLLDVRNDYEWDIGHFQGAQRPNVDCFRSTSFGL SESEQEMDSSDPLNGIDKENTDILMYCTGGIRCDVYSTILRKKGFRNLYTLKGGVSNY LKEEGSAGWVGNLFVFDGRLSLPPATYKPGAGDDDDEEEEEGRNRSSSELGRCYACGS EVVELRHRNCANIDCNRLYLCCGRCVEELRGCCGEGCTAAPRLRPLLPSHQRYHKWHL YRHLDLGAPSSPS</aaseq>

Gene Sequence

<dnaseqindica>4553..4709#4124..4408#3911..4014#3703..3800#2552..2685#1146..1273#425..478#45..302#agaatagaaggggaggaggagagacgagaggagtggttgtggccatggccatggcggccgccgtccaccgcttccttggcgtatttcccgccccgtcgacgcccacgcctccgcctcgacaactatcgcctcgcccccatcacattcctccttccctcgtccgatgttgttcctcgtcccccgtatgcgccgccacagttgcagttgcacaaccccaagagttcgtcgtcgtcaccttctataagttcgtctccatcgacgacccccgcgccgaggtgtccaggcacctccacttcctccaggttcctattccttctctccctcttcctcttccctcttctcctctatgtgaaattgttgcagctaacaaggctcgatttgattgtaccaagaatttatatgtactcgtctctctctctctcagggccgcgacatacatggccgcatttacatgaacgagcagggaatcaatgcccaggtaaaacaagcttctgtttcatttctttctttcttttcttatatcgctctagtgcttccaccaacatggagtactacggtatttaccatgtcttttatcattatatgacaacttgactgagactggtgacatggtaacatgaatgaatgatgattgtgtttagtaacaagcacatgtgttgcttaaggtccggcttgatttagattattgccgtggactctctactcgagtatagtgataaattaaatattttataaaataaacttaactaataccttaaaataactggtataagcaatgccgtagaagaaattttttaataaacattacttttagatttttagaagcgtggagcaaataatatgtttcaataaccaggtgaataagctaaaaagtagattaacaacaaagtcaaccacaactgtgaagatgtacatatgtttctacaataatatcactgccttttaccttgcattttctcttttaagcagcaatgaataaattaacatgtatgaagaagaaaacctgaaaatctttaaaatgtttattttttagcatggctagccataatatgaatgtgctgagccctgcattacatgtacaaattattacataatatgattgtttttatatcaatttctactctaatttcttcctcttgtcacagtacagtggtccacataaagatgcggtagcatatgcagactggcttagaaaagaccatcgatttcgtgatctacttgtccaaacttcaccatcgttatgtggccatgcttttcctcgcttgaaactgcggtacaaaccatcgcttgttcaggtaagccatgctttcattctactgcacaggggaaacagaagctaatagcttacctggatacgctgatctgctttctatattgaatttctcaagtgtctcaatgaactgaagattgtcatacaggaaaaaatattcttctactaacctgctaaacttctaaatctaactgaatgtagatgattttttttacatgattggaaatacaatgtgtataaaaaaaataatgaaactgtttctttcaagggtctagatactgagcaaataatcagacgtgcgagtttctagagcttctcctggatatacattgatatattttaaaatggcctagaccttctcctgatgctatatggtggcaaccttatgcctccgagctccttttgctgctgttacatttgaatgaaaaaataacttgtctatcgtactgattcctgctctggaagagatgtttattttgctgtgaaccttaactgggtttcttatattctttgggctggctgggtgcctaacggcagaacctgggaatgtaattcatttccattatctaaaaacaataattctcttggtataacaaagctggaaacaattcttttggattttgagtggagcgcaggataaggatttggtaagaagagtctatttatggaaatggcatcctgtctttcctcagtaacggagtgagtagctaccccaacttctgttccagttccattactaggcaggagtccaaagtaaatcttcccaactccacgactgcatcttccatgaagatcaggagacccctcacattctgctgcccatgagacttgcctttgtgcaccccttcaactaaactctgatctgcggtgtaaatattattaatcaattgtccactgcctggaaatttggagcttttacaagttgatgtcttagcatattctagagcaattaccctagctcttttcaacatttcgaaagtgcagtatacaccaatacatgtttttcaaatgcagtgtttcaagttttctttttggtgacagcgcaaggtccattcatgtagttgttccatcatttaagtctcttcagtttgtatttatctcggtctgtttggtggaggtgcgaactgaaaagatctgaactttttatctatactgtactaggacattacagtttgttagaaaataatccaatttactatatgaagtctctagacatcttatttcaaataaaaactcccagttggaaggaggttgttcacatcttcctttggtggaccctagcatgcgtgctacaccattgactccatcagagtggagggaaagacttgaagctagaaaatgccttgatgtgtcatcgagtgaagcagctggagatagctctggaaggaggcttttgctcctcgatgtcaggaatggtaaagtatatttttatttaatacaaacttgtatagtttagcagctgtttcctaagtactgccaaatcaacaagtgatgaatagagataagcatatttttacggctgaaaatagctattagtgctgttgtgttaatagaaaaaaaagggtttgcataacaggaggcaaaaccataaatccttgtaattggtagagtggtgctgttatgatctgtggtgtatatttaccatggctagagagagtcggagactattgagagaaaaatttccaatgtcggaagtatgtctagattatagtgtagattgaccgtatatatgtagagttgatataattcccttttagagaaaagggtgtgttttcttatacaaatttataagaaaaaactgtattttaagaataaatataggagctgtacagaaaatataactatattttcaacgaattaaatttaaaaatatacctcttttttcattattttgcgtttatatacctatgtggcgaaaatctgcacaaatatacatctttcacagtgtggtttcgcgggaccgagacggtcccgcactaccattccgcgggaccggcggtcccgtagcccagccatgcggcaccgtctcgctctcgcagcccgaaagagcggtatcgtgtggcatgcgggctgacgcaaggtaccgcgccagcggtaccgccagccagccgcgcgtgaccgctgcatggatcggtcacggatcagctgcatgcatctgcatgcatccaaccgtcccgcgggactgccgatcccgcgttttggacgggtatatttacgcaaattctccacatacaggtatataaatataaattattgtaaaaataagtatattcgtaatttttttcctattttcaactacaaacataatgtaggtttgtttttcatatatcacaagctcgatggatctgcctgttctatcgggtcactcttttgattttggactggaatttatgtttttctacttccctttttttaaaaaaatttcttgtcagattatgaatgggatattggacattttcaaggagctcagcgacctaatgtggactgcttcaggagcacatcctttgggctctcagagtcagagcaggaggtaagactagctactgtgatgtatgccacagtagagtttgttagttattggactagtttcggctggacactcctacttggtactgagtgtgtaactgtgtgtgtatgcagatggattcttcagatcctctaaatggtatagacaaagaaaatacagatatattaatgtactgcactggtggcataagatgtgatgtgtattcaacaattcttaggtaagcagatatcgacattctcactttgtggaatggaaatagtatgcatctggcgttctaataagactttctttcgagtctgtttcattcccgtacactatgttcccaggaagaagggcttccggaacctgtatacattgaagggaggagtgtccaattatctgaaggaggaggggtctgcaggatgggtggggaatttgttcgtgtttgatggacggctctccctgccaccggcaacgtacaagcctggagcaggtgatgatgatgatgaggaggaggaggaggggagaaacagaagcagttcagagctggggagatgctatgcatgtgggtcagaggtggttgagttgaggcaccggaactgcgcaaacatcgactgcaaccggctttacctgtatgttcgttcgtcgtctctgctaatgccagcaattttttctttctttctttctttcattcttacagtagatattagcagtaatgtgtataaaacgaacgaacgagtgatgaactgaagtgaagtgattatcctattaattaggtgctgcgggcgatgcgtggaggagctgagaggatgctgcggtgagggctgcaccgccgcgcctcgcctgcgaccgctgctgccatcacaccagagataccacaagtggcatctctaccgccatttggacctgggggcaccatcatctccatcctagcttactagtatagtactccatgctgccatgcatttggatggattggattggattttcctgttgtttcctgcacgcttaactgtgcgtgtagtctcatctgtcatgccccaagtctcaaatctgcctgccttctttcagcttcagttggtaccaaagctgactcacctccacgacgaccttctcttaattttcctcttggccagcctcctctttactttcggtggattcctatgtatagtccctttattgattatgtatattttgattagggacacgtctacacggcgaccacttcatcccaagtgtaaaccctccttttcagcttctaaaaatagcaaaagaagcactttgcatggatgtaccccgactgaccgataccattggaaataagggtatgaaaacagtat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0861700, RefSeq:Os03g0861700