Os03g0862000

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0862000| Description = Conserved hypothetical protein| Version = NM_001058520.1 GI:115456768 GeneID:4334880| Length = 3848 bp| Definition ...")
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Gene Name

Os03g0862000

Description

Conserved hypothetical protein

Version

NM_001058520.1 GI:115456768 GeneID:4334880

Length

3848 bp

Definition

Oryza sativa Japonica Group Os03g0862000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37238561..37242408

Sequence Coding Region

37240993..37242258

Expression

GEO Profiles:Os03g0862000

Genome Context

<gbrowseImage1> name=NC_008396:37238561..37242408 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37238561..37242408 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttccggtgaatttcggggattcgtcgtcgattcccccagtggatgcggtggtgccaatggcaatggctcctcggttactctgcttcctcttcctcctcctgcagctgttgctcttcccccgcgtcgccgccatcgtcctcgccgcaacccccgtcctgcttctcgccgccttcctcctcgccctcgtcctcgtctacagcgagcccaacaacaataatgagcccgatcatctgattccgatcaggatcaggtcgcgcaatccccatgcccatgaccatgcctcctcctgcaccgcctccggatcatcggacgacgacgacgacgcccaagactcggactcggagtcggtctcggagcctgccgatgatgagaaggctgcggtgtggacggcagaggacgagaaaagcatccagaacatcggctcgctggagctggagaggaatgccgctgtggagaagctcatgtcctcaagaagcatgcaccgctactacgccgccgaccgcgacctcatcgacctcgacctcgacggcgatggccaccagctgccccccggctccgctccctccatgcaccgcaaccccttcttcttccacgatgaccaacaagcagcagcgtcaacggcgaagctgttcagccgacacgagagcttcaggccatacttcgtcgccgacaagacgcagcagccggtcgtcctcgagagcagcggtggcggcggctcttcctcgtctttgtcttcgtcttcctctgccagcggcgaccgtgccggccagcatatgaagcaagaagccgtggctgacttttcctccagctccaaggccatggtggtgacggtggatgcagagctccccaaccccaagtccatggtaacggtggatgtagagctcatcagcgactcctcggatgatgacgacgacgacattatgtcgttgcccggccagcaaataactaaggtagcgagcagcatgtcagacgacgacgatggggaatcctcctttgaggtggagagcatcacacgacaggtaaatgaaactttgcatgcccatgctgctgctgctgctgccgccgccgccgccgcccgtgaaggaagagaagaaaaagaagagaagaacaagttggcatcgattgaggaggacgagaggagggagcgcgacgtctttccgtctccgtccccgttcctccggcaaactctgccaccattaatggcgacggcggtggttctcctcctcctgccgccaccaccgccgctcccaaagcagtcgtag</cdnaseq>

Protein Sequence

<aaseq>MVPVNFGDSSSIPPVDAVVPMAMAPRLLCFLFLLLQLLLFPRVA AIVLAATPVLLLAAFLLALVLVYSEPNNNNEPDHLIPIRIRSRNPHAHDHASSCTASG SSDDDDDAQDSDSESVSEPADDEKAAVWTAEDEKSIQNIGSLELERNAAVEKLMSSRS MHRYYAADRDLIDLDLDGDGHQLPPGSAPSMHRNPFFFHDDQQAAASTAKLFSRHESF RPYFVADKTQQPVVLESSGGGGSSSSLSSSSSASGDRAGQHMKQEAVADFSSSSKAMV VTVDAELPNPKSMVTVDVELISDSSDDDDDDIMSLPGQQITKVASSMSDDDDGESSFE VESITRQVNETLHAHAAAAAAAAAAAREGREEKEEKNKLASIEEDERRERDVFPSPSP FLRQTLPPLMATAVVLLLLPPPPPLPKQS</aaseq>

Gene Sequence

<dnaseqindica>151..1416#aatagaatgagagaattaattaataatttttatggagtagtcagcatttttctctcgaaaaacaaaagagaaaaagaaaatcatctcgatctcaatagcactccgaatctggatcgatcgggtcgtcgtcggagaatataattgatcaccatggttccggtgaatttcggggattcgtcgtcgattcccccagtggatgcggtggtgccaatggcaatggctcctcggttactctgcttcctcttcctcctcctgcagctgttgctcttcccccgcgtcgccgccatcgtcctcgccgcaacccccgtcctgcttctcgccgccttcctcctcgccctcgtcctcgtctacagcgagcccaacaacaataatgagcccgatcatctgattccgatcaggatcaggtcgcgcaatccccatgcccatgaccatgcctcctcctgcaccgcctccggatcatcggacgacgacgacgacgcccaagactcggactcggagtcggtctcggagcctgccgatgatgagaaggctgcggtgtggacggcagaggacgagaaaagcatccagaacatcggctcgctggagctggagaggaatgccgctgtggagaagctcatgtcctcaagaagcatgcaccgctactacgccgccgaccgcgacctcatcgacctcgacctcgacggcgatggccaccagctgccccccggctccgctccctccatgcaccgcaaccccttcttcttccacgatgaccaacaagcagcagcgtcaacggcgaagctgttcagccgacacgagagcttcaggccatacttcgtcgccgacaagacgcagcagccggtcgtcctcgagagcagcggtggcggcggctcttcctcgtctttgtcttcgtcttcctctgccagcggcgaccgtgccggccagcatatgaagcaagaagccgtggctgacttttcctccagctccaaggccatggtggtgacggtggatgcagagctccccaaccccaagtccatggtaacggtggatgtagagctcatcagcgactcctcggatgatgacgacgacgacattatgtcgttgcccggccagcaaataactaaggtagcgagcagcatgtcagacgacgacgatggggaatcctcctttgaggtggagagcatcacacgacaggtaaatgaaactttgcatgcccatgctgctgctgctgctgccgccgccgccgccgcccgtgaaggaagagaagaaaaagaagagaagaacaagttggcatcgattgaggaggacgagaggagggagcgcgacgtctttccgtctccgtccccgttcctccggcaaactctgccaccattaatggcgacggcggtggttctcctcctcctgccgccaccaccgccgctcccaaagcagtcgtagcagcagccagatacaagacgccctccaagaaggcagtcgtaggtttcttccgaaaatgaccaacttaattaattttaattagttactgtttcttcttattcttcaattcaattcatcttaatttagccagctcaatcttttaccatacgtcacttataaagaggagggtttatagtatgtcgtagtacactgtatgcaacacgtttgtattgtagtactacgtatgcatgcatatcagaatatgtacagagtagtacagttcagcaagcacgtaggcgacctttctggcttctgggtcgcaaagccagctgcgctgatgattctgattcttatctcacccatgcatccatctctgttctgcatctaatagaatagagcccttgaaagcaagcaaagaacaaggaattatttaatattaatgccttacttgatgcatacgtacctttgcctgataccccttttccagcaacagcaaaactaccatgcgcagattggcatcctcttccaccgtttcgtttggtaggcaagcaagcaaaagacaatccattcctggttcctctccttaaaaaccaaaccaagcgggcctatgtttactgaagattagtctttaacaggggccaattccttcccgtcatcaaacagacagacaaacaaccaacacaatgatgatcaattctgccttaacggctgcttccttccaatctcctcccactttcatcaaactacaagtacagctaaggcctcagaagcgccgcctgcaacaccaacaacagcttctgattgttggcaacaacggggcaataacaataggaaagcaggagttcgtgctaaagcctgtacaagcaacactagggccaaattcaactggtggccgcgggggttcgcccctacccgatgtgatccagcagttctactcctccctcaacgagaaggacagcaaacgtcttgaaaacctgattgctcctgactgcatcatcgacgacaacgcatactataagctgctggacatcaaggttttacttgttcttcattctcatattacagacctacagtatataagctacagcattttttagtccactgctccatatatatattggaaaccgagctatcaagacctggttaccatactcaaaattattcacagcaacttcgctgcatgtagagtacccaaacctacttcaggagactgatggatgcaatgggaaagaatttcaaatttgccatcgatgaggtttctcaaggagtggaacccactttcgcagtaatgtggcatcttggtaagatactgtgtaatacaactcaatagaagtgataagacaatcaacttggataatggtataattatattgcttttacagaatggaatggtaaaaccatccccttcaccaagggctgcagcttctacatatgttcaagaaaagaagcagcacttgttattaggtagttcatataaataactgctcttgggagattttctttgtctatttcaaaaacaatattttttgtttccatgtttcctttgcattcatgttagctgactcttagagctataacgttgcagtggctatgcttcggtttagcctctaaataaataaaaataatattccccttctgttatctctgatggtattctaacacaatgcaggaaaattcatatcttccaagagtcaccagtgaaaccatgcaagttttcactggtaggcatgctaatgagtttcttgtctatattaccatacagtccaactgaatcagaagtataactctcactgatgaaatattccaatgcttacaggaaatactaaatatcgctaccaacttgtttgacacattcccgaatatagctgaaggtacatgcttcatagaatcaactgtttagtttataatgttggtagctaaaaagcagtctaaaaatgttagtgcacatgcaggtttattaaataatccagaacaagcaatacagccctttgtgaggctttacaagtccttcgtgaagcctttcatcgtcccttttcttgcatactatacccacttttggacatacttggctaaagtattgactatgatgctccatttgttgtatagaataatcaaatggtatgtttaaagactagaatgactgaaaagtccatattgtgaaaatagaaattatatacgtaccttatctgtgcacaaacaattacaggtagccaaacaagaaaggggactgtatggggactaccaatggatcagaacttttcagatgatgtcatgtcgttgccagaagtttatcttgtccattctcctgcctagaaagagtgaacatcatttcgtttttaaggaatttaccgttactctattagtataaaactgtagataatctctggaaatggttgtaagcaagtgttgaacattatcatatttgcaccgtaacattttccctgcatcatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0862000, RefSeq:Os03g0862000