Os03g0862100

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Revision as of 13:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0862100| Description = Conserved hypothetical protein| Version = NM_001058521.1 GI:115456770 GeneID:4334881| Length = 6819 bp| Definition ...")
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Gene Name

Os03g0862100

Description

Conserved hypothetical protein

Version

NM_001058521.1 GI:115456770 GeneID:4334881

Length

6819 bp

Definition

Oryza sativa Japonica Group Os03g0862100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37245562..37252380

Sequence Coding Region

37245698..37245914,37246047..37246133,37246388..37247328,37247843..37247931,37249578..37249681
,37249782..37249881,37249999..37250074,37250159..37250273,37250358..37250889
,37251635..37252130

Expression

GEO Profiles:Os03g0862100

Genome Context

<gbrowseImage1> name=NC_008396:37245562..37252380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37245562..37252380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcccgccagccttgtctcctcccctcccctcgcgtgctgccttcagctccatcgactcctccgccccgccgccctactcccctcgccaccacgcctccgcctccgcctccgccccctccgagccgattcctccccctcgccagacgccttcgctggctggtcggatggggacgaacaagacgaacaagacaagtcccctgggccatttcgagggcttctaggacctggccttgctggactcttctttcttgctggcctcaccttcgctgcaatttctttcagaagcaacgccgcaaatggacctaaggcacaaatcgatacctcgtctacaaacagtcaggaggcaccttactccactgataatacctgtaaagaggatggtctcaaggatgctcaagtttcgttaccaagtgatagcaaaggtgaaacaagcttggatgatgaagcacatagtagcactgacccactgcctgtacaagtaaatgccactgcggagggatcaactgaacatgagacacagcatcccttgcaaaacagtgagctagttcctcctgacaaatatgttcctagtgaggatgcaggtcaagcgcacaatctcgttgcttctgatggggctgaaagcctggtgtctcctttgtcaaactccacggaaccttccatcgctgcttatgactcgcctgacaaactttacggtgtaggtccctctgagggaactccttatgtagaagatacattaaactgcgaaattactttgccagaaaaccagcatctgggtgaaaccttaacgtcagatacaatgctaggttcaggtgatgcttcgcttatccaggaaatctctgacactgcagcttcatctgatgcaaaggacaaagatactgagcagaatcctgaacttcatagaaaaaatgggatttcaccatcaagaatgcctgattatacagaatatggacatgctgatcagttgctttcatttggttcaaatgatgtgtccacagaagcaaataagccaggaaatggggtggagactttagcatccaatcaaaatgaaggagcagacgaattagaaaaccaaaacagtttatacgagtctacaacacccgacaaatcttttgcctcttctggaattcctgctcccacactgctctctgcagctttacgggtgcgtactggacagattatggttccagcggcagttgacccagcccaggcaagcgcattggctgcactacaggtcctaaaggtgattgaacctgatgcccaagctggtgacttatgtacccgacgagaatacgctcgatggttggtggtcgcaagcaattgtctatccaggaacacttcctccaaagtgtatccagcaatgtatattgagaatgtgactgaacttgcctttgatgatatcacacctgaagattttgattttccatttatacaaggcttggcagaagctgggttgatttccagcaagctttcgagatctgatatgaacgttcccctagatgttgacaatttgcataatttgttttctccggaatgtcctgtgtcacgtcaagacctcgtgagttggaagatggctttggataaaaggcaattacctgaagtggacaaaacttctatgtacaaagcttctggatatatggacgttgataaaataaatgcagctgcttggcccgctttggtggctgacttggatgctggagaccagagcattacagctcttgcatttggttttacaaggctcttccagccggataaacccgtgacgaaaggacaagtggctcttgcactttcaactggtgattctgctgatgtggttatggaggagcttgctcgtattgaagcagagaaaatagctgaagatgctgtaaatgcacatggtgaactcgttgctcaggttgagaaagatctgaatgccacttttgagagagagcttacaaaggaaagagaaaaaatagagagacttgaaaagttagctgaagaagctagggttgaattggacaagttgagagcagaaagagtggaagaaaataatgctctgattaggggcagagcttctgttgaatctgaaatggaagttctctcaaaattgaggagtgaagtagaggaacagctgcaaagtgtgctgagcaagaaggtggagatctcgtttgagaagaataggattgagaaactccaaacggaaatagagaatgacagacaggctgttgtgcagcttcaatatgaacttgaagttgagaggaaggctttatcaatggcccgggcttgggcagaggatgaagcaaagaaggccagggagcatgccagggcccttgaggaagcccggaaccaatgggagcgtcatggaatcaaggttgttgttgaaggagggcttgaagatgatgcatcagctggagtcacatgggccaatgctggcaaagaacatcaagttgacgaagcaattaaccgagctgggtctttgctggagaagctgaagtcaatgtctgctgagataaaagtccggtcttgccattccctggagagagtaatacagcatgtgaggtctttcatctcaattctaaagcagggagcagaagaagcaacgcagcgatttacagatctaggggctgctgcagctttgaaggcaaagaagttgtcatccgaagcacaggacaatgtctacgtgtttggttcaaccattggggataagtcgaagagggtggtggaggactgcaaagagggcctggagaagtttgtacacagattcaagacagactag</cdnaseq>

Protein Sequence

<aaseq>MPPASLVSSPPLACCLQLHRLLRPAALLPSPPRLRLRLRPLRAD SSPSPDAFAGWSDGDEQDEQDKSPGPFRGLLGPGLAGLFFLAGLTFAAISFRSNAANG PKAQIDTSSTNSQEAPYSTDNTCKEDGLKDAQVSLPSDSKGETSLDDEAHSSTDPLPV QVNATAEGSTEHETQHPLQNSELVPPDKYVPSEDAGQAHNLVASDGAESLVSPLSNST EPSIAAYDSPDKLYGVGPSEGTPYVEDTLNCEITLPENQHLGETLTSDTMLGSGDASL IQEISDTAASSDAKDKDTEQNPELHRKNGISPSRMPDYTEYGHADQLLSFGSNDVSTE ANKPGNGVETLASNQNEGADELENQNSLYESTTPDKSFASSGIPAPTLLSAALRVRTG QIMVPAAVDPAQASALAALQVLKVIEPDAQAGDLCTRREYARWLVVASNCLSRNTSSK VYPAMYIENVTELAFDDITPEDFDFPFIQGLAEAGLISSKLSRSDMNVPLDVDNLHNL FSPECPVSRQDLVSWKMALDKRQLPEVDKTSMYKASGYMDVDKINAAAWPALVADLDA GDQSITALAFGFTRLFQPDKPVTKGQVALALSTGDSADVVMEELARIEAEKIAEDAVN AHGELVAQVEKDLNATFERELTKEREKIERLEKLAEEARVELDKLRAERVEENNALIR GRASVESEMEVLSKLRSEVEEQLQSVLSKKVEISFEKNRIEKLQTEIENDRQAVVQLQ YELEVERKALSMARAWAEDEAKKAREHARALEEARNQWERHGIKVVVEGGLEDDASAG VTWANAGKEHQVDEAINRAGSLLEKLKSMSAEIKVRSCHSLERVIQHVRSFISILKQG AEEATQRFTDLGAAAALKAKKLSSEAQDNVYVFGSTIGDKSKRVVEDCKEGLEKFVHR FKTD</aaseq>

Gene Sequence

<dnaseqindica>137..353#486..572#827..1767#2282..2370#4017..4120#4221..4320#4438..4513#4598..4712#4797..5328#6074..6569#cctcctcgtgggtgggtgggtgggggtgggggtgtggtgctcccttcccttgtagttctctttctccccatggttggatgattggatcgacatcgacttccagacttccagtggcaaggcagccctagccctagccatgccgcccgccagccttgtctcctcccctcccctcgcgtgctgccttcagctccatcgactcctccgccccgccgccctactcccctcgccaccacgcctccgcctccgcctccgccccctccgagccgattcctccccctcgccagacgccttcgctggctggtcggatggggacgaacaagacgaacaagacaagtcccctgggccatttcgaggtgaggacctcttcttgctctctcaatcaactctcctcaatcttcaaactcttacgtacagtagaattctgcggaattcgcccttttggagaactaactaatgacactccaatggtagctgttccttctcagggcttctaggacctggccttgctggactcttctttcttgctggcctcaccttcgctgcaatttctttcagaagcaacgccgcaaatggtaccacatacatacacaccttaattacctagtatatcacatctatttctatatgctttgctttgttttccatcttacagatcaacttactcctagtgtaatatgttactttgttttctcccagtctttctcctagtgtaatatgttactttgttttctcccagtcttaatgaaattggttggcctttctcttcggccaacccggctaaaaaaagtattaaccaccttacttgtgctttcatttccatatgcaggacctaaggcacaaatcgatacctcgtctacaaacagtcaggaggcaccttactccactgataatacctgtaaagaggatggtctcaaggatgctcaagtttcgttaccaagtgatagcaaaggtgaaacaagcttggatgatgaagcacatagtagcactgacccactgcctgtacaagtaaatgccactgcggagggatcaactgaacatgagacacagcatcccttgcaaaacagtgagctagttcctcctgacaaatatgttcctagtgaggatgcaggtcaagcgcacaatctcgttgcttctgatggggctgaaagcctggtgtctcctttgtcaaactccacggaaccttccatcgctgcttatgactcgcctgacaaactttacggtgtaggtccctctgagggaactccttatgtagaagatacattaaactgcgaaattactttgccagaaaaccagcatctgggtgaaaccttaacgtcagatacaatgctaggttcaggtgatgcttcgcttatccaggaaatctctgacactgcagcttcatctgatgcaaaggacaaagatactgagcagaatcctgaacttcatagaaaaaatgggatttcaccatcaagaatgcctgattatacagaatatggacatgctgatcagttgctttcatttggttcaaatgatgtgtccacagaagcaaataagccaggaaatggggtggagactttagcatccaatcaaaatgaaggagcagacgaattagaaaaccaaaacagtttatacgagtctacaacacccgacaaatcttttgcctcttctggaattcctgctcccacactgctctctgcagctttacgggtgcgtactggacagattatggttccagcggcagttgacccagcccaggcaagcgcattggctgcactacaggtcctaaaggtattttcatgcatgcattcattcattgtcgcttgaatggataaaggagttctgtgagcttaacttccacctttgaactgttttttctatatgttgataattctacagtgggagatggactttaaaccctttaagaggatgtccacctagtcctatatgcccttaatttgtgtcatgggacatttcagtatgtgcatgaatttttttgagctatatcttttcatgcacagatgttaaagaccattggatgcacgatatgtatatgggaatatccctttaaggtgttaaagacttctcctttgtctgcaacgttctataaacagggaatctctcattctgaacatatacttgagggttggggaattgcagtaacttccatataccttgcagttgctgataattagctatcatattatatgtttcatgatgcttctcttctagttacaagatctctagagcgtggagaacttgaataattgtatgcatttgcttttaactgaatatctctttgaaggtgattgaacctgatgcccaagctggtgacttatgtacccgacgagaatacgctcgatggttggtggtcgcaagcaattgtctatccaggtgcttacttgctctatgctcacctttgagacaggagctgagtgctggacacaaactggcatacttcatggttcctttttttcccttaataacatatgcaattgcacaatgctactccctccttcccacccaacaaggcgtataaattttttctgcaataccaagacgagctgatcattttgctatgattcctgatctacccctaattaatcgcatgcttagttactctagccgcaacattccatgccaaattcacttgggtcttccacgcaatatgcaaagccgttgcatgcagtggtcgatagtcgcgagtttaatggtgcagttgttctcggcttgcaacgaggcaatacagctgcattcgcatggacacatctaggaaaagaggagaggaagcagtcacacgccttattccttgggactgcatgtaaaattttatatgcccgttgagtgggacggagggagtatattacaatctattgaaagcataagtgtatttgatattcaacttgtggatttatttctaattatataaccttattttacatgtgggtgtattagcgctctagtaggtatccaattgatctacaccattatatataatgtggacttgcaacacaatcaataatgtaattatttctctttttctctggttaactcagcaatttttaagcttgagagtaaagtccatcaccggtccctaaacttgtaccgctgtgttatcccggtccctaaactcgcaaatcgactgttcaggtcctcaaacttgttcgactgtgtcatcccggtccctaaacttgcagatcactcgtttaggtcctccaacttgttcagttgtgtcaccccggtccctaaacttggatttgaatatcatctgggtcaaataggacggtctaaagactttatatttaaaaataattcataaatttttcatgtgaactctaatgaagacaaactttatatcaaacttgtagccctcgacacgatctacaactttgagttgattttttttaagtcattttttgtcccaaaatgtaattttaaaattaaaatttcaaaatctataaacatgcaacaatattttgggaccctaaacagttttaattcaaaaacttttcaactacaaagttgtaggtcgcgtcgagggctacaattttgatataaagtctgtcttcattagagtatacatgaaaaagttatgaattattttttgatataaagtttttagaccgtccagtttaggaaccagggtgacacaactgaacaagttggaggacctaaacgagtgatctgcaagtttagggaccaggatgacacaatcgaacaagtttgaggacctgaacggtcgatttacgagtttagggactgggatgacacagcggtacaagtttagggaccggtgatggactttactcttttaataatacatgtataataaatcatccatccgcttgctgatttttagatttatttaacttcttccttatcatcatggagctatttagctgctgtggcttatactttttgtggatagaaaataggtcagcaaaggatggaatttcatatttttgccttataattttgaatttggttcacttagtaattcattccatagactaagttcttgtttggatttccaactataggaacacttcctccaaagtgtatccagcaatgtatattgagaatgtgactgaacttgcctttgatgatatcacacctgaagattttgattttccatttatacaaggtgagaagagaatagtgttgaggacaaactacatctttagtaaaatttactatgttttcatgaactaatgatatttgtacatctttcaatatgcccataggcttggcagaagctgggttgatttccagcaagctttcgagatctgatatgaacgttcccctagatgttgacaatttgcataatttgttttctccggaatggtgattctctaacccccaacgcaccccacaccaaacacccacacacccacacaacgacacacacctctctaccacaagtgcaaccaaaacagtcctaataatttgtccttactgcagtcctgtgtcacgtcaagacctcgtgagttggaagatggctttggataaaaggcaattacctgaagtggacaaaactgtgagaaatgaaaagattcttatccttctaagttggtataaaagaccagctggttgttctgatgttaaaactttctgtgggcagtctatgtacaaagcttctggatatatggacgttgataaaataaatgcagctgcttggcccgctttggtggctgacttggatgctggagaccagagcattacagctcttgcatttggtagggttttataccacatatccacacacacacacacatattttccctcttttattctgagtaatcactaagctcttttcaaaggttttacaaggctcttccagccggataaacccgtgacgaaaggacaagtggctcttgcactttcaactggtgattctgctgatgtggttatggaggagcttgctcgtattgaagcagagaaaatagctgaagatgctgtaaatgcacatggtgaactcgttgctcaggttgagaaagatctgaatgccacttttgagagagagcttacaaaggaaagagaaaaaatagagagacttgaaaagttagctgaagaagctagggttgaattggacaagttgagagcagaaagagtggaagaaaataatgctctgattaggggcagagcttctgttgaatctgaaatggaagttctctcaaaattgaggagtgaagtagaggaacagctgcaaagtgtgctgagcaagaaggtggagatctcgtttgagaagaataggattgagaaactccaaacggaaatagagaatgacagacaggctgttgtgcagcttcaatatgaacttgaagttgagaggaaggctttatcaatggcccggtaacaattcgtaatacctgaattttcctctcaagtaaattcgtttgcctttaccttggacctatctttgaccgcacattatttttggcttacatgcagtttctcttgctttatgattttatagggttttaacttctatccatttattatgattctgaacttccttttaagaacttcgaattgtagtgataatatataggagactataaaagcatgatggttctcctgggaacctagatattcatgtgtcctgcataacactcaactgcttaaggctgtgttcgataccgggagttcccaactcccccctctcgttttccgcgcacgctttttaaactactaaacggtgtgttttttttgcaaaaagtttatatatgaaagttgcttaaaaaatcatattgatccattttcgaaaaatagctaatacttaattaatcacgcgctaatggaccgctccgttttccgtgcataggtgatgggttcccaacacccaccaccgaacacagcctaagtgatggtatctccacaggttcttttgtgttgttgttttcattaaaaaaatgatatttgtgttttagccctcaaaactgctggttctgtttaagttgctcctgtaccatgatgcatttctgcctgctgtatgatatcactagtaggctccactcaaaatgcttatttgacattgtagtgagtgatgagtgatgactgtcacttcctatgaattcacatgcgcatctttaaccagggcttgggcagaggatgaagcaaagaaggccagggagcatgccagggcccttgaggaagcccggaaccaatgggagcgtcatggaatcaaggttgttgttgaaggagggcttgaagatgatgcatcagctggagtcacatgggccaatgctggcaaagaacatcaagttgacgaagcaattaaccgagctgggtctttgctggagaagctgaagtcaatgtctgctgagataaaagtccggtcttgccattccctggagagagtaatacagcatgtgaggtctttcatctcaattctaaagcagggagcagaagaagcaacgcagcgatttacagatctaggggctgctgcagctttgaaggcaaagaagttgtcatccgaagcacaggacaatgtctacgtgtttggttcaaccattggggataagtcgaagagggtggtggaggactgcaaagagggcctggagaagtttgtacacagattcaagacagactagccagtaactattagtgtctacaccaacagttgatagttcctgtcaaacttgagaaagaggaaccgtattagtttcttggaataaattcctccatgagtgctgctgctcaggtgtggtggactggtggtgttgtaaagtattgaaactgaaactagcacagaaggttccatagaataagccttgttctgtaatgtaatggaatccaaaaagagcaaggcagacagtgagtctccttgaatgttacttagac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0862100, RefSeq:Os03g0862100