Os02g0100700

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Revision as of 02:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0100700| Description = FG-GAP repeat containing protein| Version = NM_001052118.1 GI:115443606 GeneID:4327975| Length = 6677 bp| Definitio...")
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Gene Name

Os02g0100700

Description

FG-GAP repeat containing protein

Version

NM_001052118.1 GI:115443606 GeneID:4327975

Length

6677 bp

Definition

Oryza sativa Japonica Group Os02g0100700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34262..40938

Sequence Coding Region

34436..34498,34578..35120,35566..35643,35823..35915,36086..36181
,36709..36762,36856..37059,38577..38708,39042..39107
,39885..40184,40332..40808

Expression

GEO Profiles:Os02g0100700

Genome Context

<gbrowseImage1> name=NC_008395:34262..40938 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34262..40938 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaagcgggatctgggcatcctcctcctcgccgccttcgccgtcttcttctcgctccagcacgacggcgacctctccttccgcgaggcctggtaccacctctccgatgccgactaccccatcaagcacgacgccgaccgcctcccctctcccctagtcgccgacctcaacggcgacggcaaacccgaggtcctcatccccacccacgacgccaagatccaggtcctccagccccaccccaggccctcccccgacgatgcctccttccacgacgcccgcctcatggctgatgtctccctcctcccctccaacgttcgcctctcctccgggaggcgccccgtcgccatggccgttggcaccgtcgaccgccactacgcccacgccccctccccctccaagcagctcctcgtcgtcgtcacctccggatggtccgtcatgtgcttcgaccacaacctcaaaaagctctgggaggctaatctccaggacgatttcccccacgccgcccaccatcgcgaggttgccatttccattaccaactacactctcaagcatggggatgcaggtttggtcatcgtcggaggaaggatggaaatgcaacatcattcagcagagcttttcgatgaatttatggtgtcagaacacaacagggaagagcaccgtagaagcgccagtgagaagcaggcttctgagacaggcaacacagacctgcgtcattttgccctttatgcttttgctggccgcactggtgaattaagatggagccgaaagaatgagaatatcccatcgcaaccatccgatgcttcagtgctgataccacaacacaattacaagcttgatgcccatgcccttaatagtcgtcatcctggtcagttcgaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattgggataggagagaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactgaagaaaacacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatccacctggaaaggatgtttccaataggttagcaaatgtgattgggaaagctgcagatatggctaattcaaataaaatcaagaagtcacaaaggacgctttatgttccgacaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaagaagggatagaggctgttcatctagcttctggacgtacaatctgcaagcttcatttaacagaaggaggccttcatgcagatattaatggagatggggttctagaccatgttcaggttgttggtgcaaatggcatcgagcaaacagttgttagtggttcaatggaagtgctgaaaccttgttgggcagtagctacatctggtgtgccagtgcgggagcaactttttaatgtttctatctgccattacaacaatttcaatttgtttcatcatggtgacttttcaagaagttttgggaggacatttgatacaactggcttagaggtggcgactcctattctgctccagagagatgatggtcataaacacaggagaggaagccacggggatatcatctttcttacgagtcgtggggaggtgacctcgtactctccaggtctacttggtcatgatgcaatatggagatggcaactgtcaacaggtgcaacatggtccaaccttccgtctccatcagggatgatggaaaacattgtagttccaactttgaaggctttctctctgcgagcctatgacccaaaacaggtaatcatcgcgggtggtgatctggaggctgtggtgatttctccttctggtggtttattggcatccattgaactccctgcacctccaacccatgcgctggtacttgaagatttcaatggtgatggtttaactgatattattctggtaacatcggggggagtctatgggtttgtgcagacaagacatcctggggctcttttcttcagcacgcttgtgggttgcttgatagttgttatcggagtgatatttgtttcactgcacctcaactcctcgaacagcggtaaacctagggcttcaaccgactataggtga</cdnaseq>

Protein Sequence

<aaseq>MRKRDLGILLLAAFAVFFSLQHDGDLSFREAWYHLSDADYPIKH DADRLPSPLVADLNGDGKPEVLIPTHDAKIQVLQPHPRPSPDDASFHDARLMADVSLL PSNVRLSSGRRPVAMAVGTVDRHYAHAPSPSKQLLVVVTSGWSVMCFDHNLKKLWEAN LQDDFPHAAHHREVAISITNYTLKHGDAGLVIVGGRMEMQHHSAELFDEFMVSEHNRE EHRRSASEKQASETGNTDLRHFALYAFAGRTGELRWSRKNENIPSQPSDASVLIPQHN YKLDAHALNSRHPGQFECREFRESVLGVMPHHWDRREDTFLQLAHFRRHKRKALKKTP GKAVVNNVHKPSEHNPPGKDVSNRLANVIGKAADMANSNKIKKSQRTLYVPTITNYTQ VWWVPNVVVAHEKEGIEAVHLASGRTICKLHLTEGGLHADINGDGVLDHVQVVGANGI EQTVVSGSMEVLKPCWAVATSGVPVREQLFNVSICHYNNFNLFHHGDFSRSFGRTFDT TGLEVATPILLQRDDGHKHRRGSHGDIIFLTSRGEVTSYSPGLLGHDAIWRWQLSTGA TWSNLPSPSGMMENIVVPTLKAFSLRAYDPKQVIIAGGDLEAVVISPSGGLLASIELP APPTHALVLEDFNGDGLTDIILVTSGGVYGFVQTRHPGALFFSTLVGCLIVVIGVIFV SLHLNSSNSGKPRASTDYR</aaseq>

Gene Sequence

<dnaseqindica>175..237#317..859#1305..1382#1562..1654#1825..1920#2448..2501#2595..2798#4316..4447#4781..4846#5624..5923#6071..6547#agtgtctaggccagtccagtccagtccagtccaggacggtccagtccggtcccgtagagcgccggcgcgtgtagcttcctcctccgctccaggctccagcgagggagggagggagaccaccgtctccgccggctttgagagagaaagagaaagagagagagagagagcggcgagatgcggaagcgggatctgggcatcctcctcctcgccgccttcgccgtcttcttctcgctccaggtcagtcctagcttcttccttccttggtaccaaaccctaaccctaaccctaacccgcttgaattgatccatggccacagcacgacggcgacctctccttccgcgaggcctggtaccacctctccgatgccgactaccccatcaagcacgacgccgaccgcctcccctctcccctagtcgccgacctcaacggcgacggcaaacccgaggtcctcatccccacccacgacgccaagatccaggtcctccagccccaccccaggccctcccccgacgatgcctccttccacgacgcccgcctcatggctgatgtctccctcctcccctccaacgttcgcctctcctccgggaggcgccccgtcgccatggccgttggcaccgtcgaccgccactacgcccacgccccctccccctccaagcagctcctcgtcgtcgtcacctccggatggtccgtcatgtgcttcgaccacaacctcaaaaagctctgggaggctaatctccaggacgatttcccccacgccgcccaccatcgcgaggttgccatttccattaccaactacactctcaagcatggggatgcaggtttggtcatcgtcggaggaaggatggaaatgcaacatcatgtaattatgcttacttttcctctttataccactgctgctcatctacatgttgtaaaacacacatcatacttctttttttacatgtgcccaaatgattcgaaaataataaccatattactagtttgtaattcaagttgcattccagaataactcagggccaccagcatagaaccatccctcgtttgtaattcaggcaaggctacgcaaaaatcgttttcctcctttgcagtaggatttattcttttatagaatttgctgttatgtgtggatgcctttattttttttgctacatttctacaaaattaattttagatacttcaaagttctaattctatcatataatgcttgaccatcttgttgaatccttactgataataacatcttattttcaaactttctcttttggcttgaatatgttaacttacggtagttacttgtttgtcagtcagcagagcttttcgatgaatttatggtgtcagaacacaacagggaagagcaccgtagaagcgccagtgagaagcaggttatcttgtatttgtaagcttatcagttagtttatattctctgtgccccatgaaaaaataaaactgtgggcaatattttatatcgagaaaacaacaaccagagtacgttgttgtatccttgctccttcacctgatgaaggcctaacctgcgctggtattgcgctttgatgtcatgcaggcttctgagacaggcaacacagacctgcgtcattttgccctttatgcttttgctggccgcactggtgaattaagatggagccgaaagaatgaggtgcacccatcctgtagtccatgacttttactttatagtttatactactatttatttcaaggatgttgccacttctgtgcattttgtgtcatgcattagcatgcacaggacatgaatagcttggaaagcttgccatacattattcatgtgtttctgttttgacaaaacagaatatcccatcgcaaccatccgatgcttcagtgctgataccacaacacaattacaagcttgatgcccatgcccttaatagtcgtcatcctggtcaggtgagaattgtgcctagcactcttgataatggtatatttgccaacagaagtcacagttacatacttaaatctgagcaagtgttatgtttctgttgatatttgttctttgttagcttggtttaattatcatgatgtcgatcatcttcagccagtataggtggctgtcttgactctttagcatattcagcattcccacttatgtacaccagaatgatttgcgtgtgttctacaggaatgtactttcaaatccatttgttctttgttagcatctttagccacgtttccttcaattccttactcattctctgcatgttgctgctgctaatatttctgattgatgaaccaatagcctgaacatctttgaacaaaatttagtggattggtaaatatcaaattctgctgccatgttgcttttgatttggatttcaatgtcaaatgtgctgttattttaccacaagatgctacacagttggttcttgtagtaaatatgatctcattacaagctaacatggcatatatggtttcagttcgaatgtcgggaatttagagaatcagttcttggggtcatgcctcatcattgggtaagaatagatattagataactactatatcatatttctctaatttaattttttgggatgatcaactcagattgatttttttttccttttcaggataggagagaggatacttttctgcaacttgcccattttaggaggcataaaaggaaagcactgaagaaaacacctggaaaagctgttgtaaataacgtgcacaagcccagtgaacataatccacctggaaaggatgtttccaataggttagcaaatgtgattgggaaagctgcagatatggctaattcaaataaaatcaagaaggtataatgcatgcagacacaaacacatagttcttacgcactagcatgttgactgtgttgttctttttgtgtttggtgttttggggaggggggaggggggagggggagttgcatgaacgcagtagtggtaacgtgcatgggccaacgtaggcaccaggagcaggagcactcgtgattgcacggcgcacagagctactcaagatggagaggatggtggcgtggggaggggagaggataggatttgaaatgaggcagatcagtggaggcagtggtgctggcagttactgggccaagatgacattgtaggtggtcgggtagaaggaaaaagagaagatggcaggggcagtcgagggttcttaagagtggatttggtgttcacccagtaggaaatgggtgaagatttgcccagtagggcctcccttactctcatttcaaaatgtatcctctcaatttatctgcaagtgtgttcgtcttgaagatactgtatactttccgatccatttactgtactctcaaaattagtgttaaattgtatccctggaactatattctaaataagtaagaacagtcaaactttgaaccaaacatacttacctaacaagttcatgtctcgtcctcagctctacttatctgcatgattatgagactatgggcacgtcctaactggttgattgtatagattacggatagaaaaaaatgctcatttttggaagtagcttagaaaaagttacctaagcaatgctgatgtagaaagttttgggagaaatcatactttgctggaagcctggtatgaataatccatacctcacattagctgtttaggacgcacactatatatactcatgagaacagatgcattatttttctatagaaatcaacgaataacacacgtgtccatgtatttgcactcaaaatatcgtgagtgggagtgggtggagaatatgccatcgcccccaattccctattttgaagtgtataagatataagataagattagattggtgattggatttactttcatcaatgatctgtgatctctagtacttaagtagtgtctctagctttttttgattggtacgtctttcctggttcattttttgattagtgtatgtctttcctggttcagtggtgtgaggtaggtaggtgatgttaatagcttgatgttggatgtactttgtttatggcattccatgttagtgtacttcatgcctatgtgagtttggcccttactattaaaatcgttgcctctgattagtgatctaatgcataacaatctaaagactcactcggtaattcattaagatacatctgatatcttttatgtgcatagtgcagtcctccttcaattattggcattcatcacttattcaggcgattcttacataaattgcatgttgtttctttgctgcatcataattctttttcccccaatacaatcacagtggtctcacaccaaaattttatttacatatatcgtgttactttatcatgaaatgtaacatctttcctctactgcagtcacaaaggacgctttatgttccgacaatcaccaactatactcaagtttggtgggttcctaatgttgttgttgcccacgaaaaagaagggatagaggctgttcatctagcttctggacgtacaatctgcaaggttgcaagatatatctcagtgatatttgtgttttcacgtccctgccaaagcttgtctaattagttcattgtaaattatttatttgtttatagaattttcattgcctggtccactggctgacatcaagctacaaatagtgttgaatactacctgaatggtcactaaaatcaatctatgtttgcacttgcatatgtacacattatgcatatattttttagcaatcattttccttctaaggaaatcataattcacgtgtgcgcataatttacatgtctgtaatcccatcatacaacttttctgtctttgttttctgatttttttttccatttccagcttcatttaacagaaggaggccttcatgcagatattaatggagatggggttctagaccatgttcaggtgtgttgagcgttgagattagagagcaatttacacttttcatttccatttttttagaatacaagtcttcatgccactatattttgtctgcaacttcaaggagaactgtggaagtgtggattagtccattaagcgagttagctgcttgagtcatgaggtgttatggtgtactttacatcttataaagtcaatgaaaaaaataaggggcaattgcaaatttaccactgctttgaatcgttattgcaaggctaccactagaaaattgcaaaaatgccactagaactgtcattcaagtggcatccttacaaaattgaaaaaactggtggcaaatttgcaaatgccccaaaaaataaatgtttcaggattttcacttagttcaattaatcaatatgacctttagtgacactgaaatgttctttttttctctcactagttttgctatcttttcacactagtatatactttttaataaagtgttagttatgttatatgtatgccttttctcataaatgactgcaaaaaaaaaggtatgcaatgtccaaacaaaaatgtgaacaagaacacccccttgtcactttgcaataaataatctattttcatgtttaccacaggatgtgtactgaattagatatacaggtacacaagtccataatcatatttctttgctttcaatgtgcattcaaatttattgtagttgttttctttagtagcttcacttgtgccctacttgttattgttatcttccagtgtaaaactgagtgataatgtcttctgtaggttgttggtgcaaatggcatcgagcaaacagttgttagtggttcaatggaagtgctgaaaccttgttgggcagtagctacatctggtgtgccagtgcgggagcaactttttaatgtttctatctgccattacaacaatttcaatttgtttcatcatggtgacttttcaagaagttttgggaggacatttgatacaactggcttagaggtggcgactcctattctgctccagagagatgatggtcataaacacaggagaggaagccacggggatatcatctttcttacgagtcgtggggaggtcagcacatcactgtttttccttggaaattcctatcattaatgataattatacattgttgtccttgttccacatgtgcatttcttttcaactttccatacctccctcttgtaatctgcaatacactgactttctttattatcgtaggtgacctcgtactctccaggtctacttggtcatgatgcaatatggagatggcaactgtcaacaggtgcaacatggtccaaccttccgtctccatcagggatgatggaaaacattgtagttccaactttgaaggctttctctctgcgagcctatgacccaaaacaggtaatcatcgcgggtggtgatctggaggctgtggtgatttctccttctggtggtttattggcatccattgaactccctgcacctccaacccatgcgctggtacttgaagatttcaatggtgatggtttaactgatattattctggtaacatcggggggagtctatgggtttgtgcagacaagacatcctggggctcttttcttcagcacgcttgtgggttgcttgatagttgttatcggagtgatatttgtttcactgcacctcaactcctcgaacagcggtaaacctagggcttcaaccgactataggtgacgacattatgtcagtcgacagaattccttgtcaatattgaggtgttgttatagcatttgatttagatttttcatataatcaactgccaactgggttatgtaaacttgtgcggcgaatgcatttttggcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0100700, RefSeq:Os02g0100700