Os02g0101700

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Revision as of 02:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0101700| Description = Similar to HECT ubiquitin-protein ligase 3 (KAKTUS protein)| Version = NM_001052126.1 GI:115443622 GeneID:4327983| L...")
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Gene Name

Os02g0101700

Description

Similar to HECT ubiquitin-protein ligase 3 (KAKTUS protein)

Version

NM_001052126.1 GI:115443622 GeneID:4327983

Length

3297 bp

Definition

Oryza sativa Japonica Group Os02g0101700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:86724..90020

Sequence Coding Region

87215..87280,87376..87495,87593..87721,87801..87869,87962..88042
,88133..88237,88338..88568,88665..90020

Expression

GEO Profiles:Os02g0101700

Genome Context

<gbrowseImage1> name=NC_008395:86724..90020 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:86724..90020 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgaggtgcaatgtcatttgttgctgcgacaatggctgggctggcttctgttggtggtcggggggttagaggtagtcgcgatcgacgtggcctgtcacttggaggtagcataaatgagcacaataaactgatatttatggctggggggaagcagctcagcaaacatctgactgtgtatcaagctctccaacgtcagctgatgtttgaagaggatgatgatgagaagtttaatggatctgatttgtcaaatgatggaaatcgattttggggtgatgtgttcacgataacataccagaaggctgatagccaggctgagaaggtatcccaaggtggttccacctcgttgaactcaaaatcagatccttcaagatctatatctgaattgaaaggtgtttctctccttgatagcatcttacaggcagaactcccatgtgatctagagagaacaaactcaacttacaacattttagcactattgcgtgtattagaggggctcaatcagttgtcccctcgtttaagagtacatgctgcttctgatgattttgctgagggaaaaatcaccacactggatgagctatatagaactggagccaaggtaccgtcagaagagtttgttaatagtaagttgacaccaaagcttgctcggcaaatgcaggatgttcttgccctctgtagtggcagtttaccttcttggtgttaccagatgaccaaagcctgccctttcttgtttccctttgaaacaaggagacagtacttttactccacagcatttgggttgtcccgtgctttgaatcgacttcagcaacaacagggtgacaaccaaaatgctggtggcgaaagggagatccgatttggaaggctacaacgtcaaaaagttcgtgtttcccgtaaccgtattctggattctgctgctaaagttatggagatgttctccagtcagagagctgttcttgaggtagaatactttggtgaagttggaacagggcttgggcccactttggagttctatactctcttaagccatgaactccagagtgttcgccttggattatggagatctagttctccatctgatacgggaatgcaaattgataggagcgcaagtcccgacgatgacttggcagccaaagaactcagctcagatttacctgacaatggcagccacttgatacaagctccctttggattgtttcctcggccttggccacttaccgttgatgcttcagaaggcagtagattttctaaggtcatcgaacatttccgcttggttgggcgagtgatggcaaaagttttgcaagatggaagacttttagatttgcctctatcaacagcactttataagcttatacttggacaagagctggacttatttgacataatctcatttgatgctgaattcggaaagacattgcaagaactgcaaattcttgttgaacggaagaggttccttgaatccacttatggcatgaatcagctagaagtcacggacttgcgtttccgtggcactcctatcgaagatttgtgtttagattttactcttccaggttatcctgattatattcttaaagaaggcgaggaaaacacaattgtaaatatttacaacttggaagagtatgttactttggtagtggatgctacagttaaatcagggataatgaggcaagtcgaagcatttagatcaggatttaaccaggtctttgacatctcatccctgaaaatattttcacctgaagagcttgactatctaatatgtggtcgccgagaaatttgggagcctgattcattggtggataatataaaatttgatcatgggtatactgctaaaagtcctgcaattgtaaatctactcgagatcatggctgaattcaccccagagcaacaacatgcattctgccagtttgtaactggtgctcctcggcttccgcctggtggtttagctgcccttaatcccaagcttactatagttaggaagcacccctcaagtgcggtgaatacttcaaatatcgctggagttacagagtctgcagatgatgatctgccaagtgttatgacatgtgctaattatcttaaattgcctccatactccacaaaagaagtgatgcgcaagaaattgctttatgcgatcctagaaggccgtggatcatttgatctatcatga</cdnaseq>

Protein Sequence

<aaseq>RGAMSFVAATMAGLASVGGRGVRGSRDRRGLSLGGSINEHNKLI FMAGGKQLSKHLTVYQALQRQLMFEEDDDEKFNGSDLSNDGNRFWGDVFTITYQKADS QAEKVSQGGSTSLNSKSDPSRSISELKGVSLLDSILQAELPCDLERTNSTYNILALLR VLEGLNQLSPRLRVHAASDDFAEGKITTLDELYRTGAKVPSEEFVNSKLTPKLARQMQ DVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALNRLQQQQGDNQNA GGEREIRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYFGEVGTGLGPTLE FYTLLSHELQSVRLGLWRSSSPSDTGMQIDRSASPDDDLAAKELSSDLPDNGSHLIQA PFGLFPRPWPLTVDASEGSRFSKVIEHFRLVGRVMAKVLQDGRLLDLPLSTALYKLIL GQELDLFDIISFDAEFGKTLQELQILVERKRFLESTYGMNQLEVTDLRFRGTPIEDLC LDFTLPGYPDYILKEGEENTIVNIYNLEEYVTLVVDATVKSGIMRQVEAFRSGFNQVF DISSLKIFSPEELDYLICGRREIWEPDSLVDNIKFDHGYTAKSPAIVNLLEIMAEFTP EQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKHPSSAVNTSNIAGVTESADDDLPSV MTCANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS</aaseq>

Gene Sequence

<dnaseqindica>2741..2806#2526..2645#2300..2428#2152..2220#1979..2059#1784..1888#1453..1683#1..1356#cgaggtgcaatgtcatttgttgctgcgacaatggctgggctggcttctgttggtggtcggggggttagaggtagtcgcgatcgacgtggcctgtcacttggaggtagcataaatgagcacaataaactgatatttatggctggggggaagcagctcagcaaacatctgactgtgtatcaagctctccaacgtcagctgatgtttgaagaggatgatgatgagaagtttaatggatctgatttgtcaaatgatggaaatcgattttggggtgatgtgttcacgataacataccagaaggctgatagccaggctgagaaggtatcccaaggtggttccacctcgttgaactcaaaatcagatccttcaagatctatatctgaattgaaaggtgtttctctccttgatagcatcttacaggcagaactcccatgtgatctagagagaacaaactcaacttacaacattttagcactattgcgtgtattagaggggctcaatcagttgtcccctcgtttaagagtacatgctgcttctgatgattttgctgagggaaaaatcaccacactggatgagctatatagaactggagccaaggtaccgtcagaagagtttgttaatagtaagttgacaccaaagcttgctcggcaaatgcaggatgttcttgccctctgtagtggcagtttaccttcttggtgttaccagatgaccaaagcctgccctttcttgtttccctttgaaacaaggagacagtacttttactccacagcatttgggttgtcccgtgctttgaatcgacttcagcaacaacagggtgacaaccaaaatgctggtggcgaaagggagatccgatttggaaggctacaacgtcaaaaagttcgtgtttcccgtaaccgtattctggattctgctgctaaagttatggagatgttctccagtcagagagctgttcttgaggtagaatactttggtgaagttggaacagggcttgggcccactttggagttctatactctcttaagccatgaactccagagtgttcgccttggattatggagatctagttctccatctgatacgggaatgcaaattgataggagcgcaagtcccgacgatgacttggcagccaaagaactcagctcagatttacctgacaatggcagccacttgatacaagctccctttggattgtttcctcggccttggccacttaccgttgatgcttcagaaggcagtagattttctaaggtcatcgaacatttccgcttggttgggcgagtgatggcaaaagttttgcaagatggaagacttttagatttgcctctatcaacagcactttataagcttatacttggacaagtaagtgatatactcttactggattaatatcagtttttccttttgttacatttgttttattgaagttagtctgaacaaatgaactgtatgtgccaggagctggacttatttgacataatctcatttgatgctgaattcggaaagacattgcaagaactgcaaattcttgttgaacggaagaggttccttgaatccacttatggcatgaatcagctagaagtcacggacttgcgtttccgtggcactcctatcgaagatttgtgtttagattttactcttccaggttatcctgattatattcttaaagaaggcgaggaaaacacaattgtaagtgatgaaacccatcttagttttgtgtttgtcccagtgactagtgtctgcatttgctcctttttgtggtaataaatagtattactctgttttgcaggtaaatatttacaacttggaagagtatgttactttggtagtggatgctacagttaaatcagggataatgaggcaagtcgaagcatttagatcaggatttaaccaggtgcaacgtcattttctctctcttgtaatcattttattagctgtttttttttgtttactgtaattgttcatgtttacctttctgttttaggtctttgacatctcatccctgaaaatattttcacctgaagagcttgactatctaatatgtggtcgccgagaaatttgggaggtaatgctctctctctctctctcacacacacacacacacacacgcacacagttttagtttgttacatttcactgaataaacctgtgctgcagcctgattcattggtggataatataaaatttgatcatgggtatactgctaaaagtcctgcaattgtaaatgtaagtgcgctatatgcatttcaatatctgaattggccttctgtaagtttagttacttaattgctctacatgtttgtagctactcgagatcatggctgaattcaccccagagcaacaacatgcattctgccagtttgtaactggtgctcctcggcttccgcctggtggtttagctgcccttaatcccaagcttactatagttaggaaggtaacattcttggtatatcttattagcatgttataacgtatgaatattgtcgcctcattttgggtgatataactttgttgttgcttttgatcattagcacccctcaagtgcggtgaatacttcaaatatcgctggagttacagagtctgcagatgatgatctgccaagtgttatgacatgtgctaattatcttaaattgcctccatactccacaaaagtacggtttctttctctggtacatggtgaatttttcgttttctcttgtacatgtgctaattatcttaactggctttatgcttttgctttttgcaggaagtgatgcgcaagaaattgctttatgcgatcctagaaggccgtggatcatttgatctatcatgagttgatgataactaacatacagggctcaccattgaatgccctatcaattttatccagaattagtttctttgttgcccgtgtgacataataggttgaggctaccagccgctgtggacaaagcttgaaggacagagtctcccttcagacacaggtgctgaactggagtatttctcatgttaaatactcccatatatataagctgatacataaatagataatgtagtattggtttttgcagtgaaatcaagttccatatatgtggcgtgggcagcctcgcgagcaccgagaagaggagctctatcctttgccgtacatgtaaataaagaaaaaaaaagaaggggcaatagtagtttacatatttgtcgaaagaaggattgattcgttggtgaaaccctttgctgtgtatctggaatgttattactttgctattattatgttgttaaccatcatgtgtacatgtgtgatcgataatatcgtactgtttttgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0101700, RefSeq:Os02g0101700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os02g0101700&oldid=21195"