Os10g0378300

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Revision as of 08:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0378300| Description = Similar to Truncated copper-binding protein CUTA| Version = NM_001071015.1 GI:115481773 GeneID:4348499| Length = 520...")
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Gene Name

Os10g0378300

Description

Similar to Truncated copper-binding protein CUTA

Version

NM_001071015.1 GI:115481773 GeneID:4348499

Length

5200 bp

Definition

Oryza sativa Japonica Group Os10g0378300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12364875..12370074

Sequence Coding Region

12364875..12365026,12365346..12365446,12366678..12366740,12369203..12369234,12369389..12369483
,12369602..12369686

Expression

GEO Profiles:Os10g0378300

Genome Context

<gbrowseImage1> name=NC_008403:12364875..12370074 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:12364875..12370074 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcctcccctccccgctcggatctctctccgccgccgccaccgccgccccacgccgcgccgccgcggctgccgggctctcgccgctcctactccggcgccgcgcccctatcgccggcgctctcctcttcctcagcctcggcgccttcgcaggggtgagaagtctcagctcttcagcttctgctcgaatggagtctacttccaccactgtgccttccattgttgtgtatgtgacagttcctaataaagaagcaggaaagaggctagctgggagcattataagtgagaagcttgctgcttgtgtgaacatagtgcctggtattgaatctgtttactggtgggaaggaaaggtgcaaactgatgctgaagaactgctcatcataaagacaagggagtctcttcttgatgcgttgaccgaacacgtgaaagccaaccatgagtatgacgttcctgaagtcatcgcgctgcccataaaaggaggcaacctcaagtacctggagtggctaaagaacagcactagggaaagctaa</cdnaseq>

Protein Sequence

<aaseq>LLPSPLGSLSAAATAAPRRAAAAAGLSPLLLRRRAPIAGALLFL SLGAFAGVRSLSSSASARMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVN IVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGG NLKYLEWLKNSTRES</aaseq>

Gene Sequence

<dnaseqindica>1..152#472..572#1804..1866#4329..4360#4515..4609#4728..4812#ctcctcccctccccgctcggatctctctccgccgccgccaccgccgccccacgccgcgccgccgcggctgccgggctctcgccgctcctactccggcgccgcgcccctatcgccggcgctctcctcttcctcagcctcggcgccttcgcagggtaacgcgcctctccaatcaatctaggaggattccgcagtttgaccggtgctaactattgttcataggattcgatgggattcaaagatttggtcatatgattcgaaatgaatggggacggtttgagttcttggttgctcacagaagtgatgtataggaactattgtgccgattgtgcttaaatgcgaagtgcttcactctttttaccttgatggaggatgggagtggtgttatatttacagcctagttacatcaaagtaatgtagtcactttggatttgttttctggactggtaaataaccagtatgggaactttacagggtgagaagtctcagctcttcagcttctgctcgaatggagtctacttccaccactgtgccttccattgttgtgtatgtgacagttcctaataaagaagcaggtacattgtttatatgtgacactagacctgtacttttgtgataactttgttactaaatttgtagttttgtgatagtccaccttaaatctgcagttctgtgagaaaattaaatctgtaattttgtgatacatcatctcaaatctatagttttatgataatttggctaaaatatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaatggaggaagtatgtagttttgtgaaatttactctgtgttttattgtcatttaattgtacctgttgttaacacccaaattcggcacctagattcgaaataggaaaacatcgccaaaatttggaaatgattggtttccttcacagagccgatctgaccgctgcctatgggtcggtcttaccggtggtgtgtggccggtcagaccgattccaagttgaatttcaccaagtctcgggtttccttgcttgggtttccttgcttggtgaggtatttttaaagttctaattggtctctaccctgagtttgatgtggaggagattgtaggaggcaagaccaacccctttataaggaacaagaccaaggccggttcaattgaacacacaatctactttgaacacaattagccaattgaatcactttttcaatatcatgtctacttttttgcttagttctagcctagttttgttcatctttgtcgatttgcgcagtaaatcgcccaccttcgctgtgagagtgcgaaatccctctgtaggttcggcccgtaaaccctgttcgcccacaagacgggtgtttatccttgtttcatctaaattggctccgctagcctgtttaatcttgcaaaacccatcttggtttagctttgtctagatcaaggtgtttgacgactccatatcaccgcaaggcatttaggtgtctcgatcgtgcttgtcgacttgagcaaacaagttgtcaacacctgtgctgaacaaagtagagattatttcctcaccccattgactattttagtagcttccattcaagaatagcttctattatgctactcagcggtcctagctgtactcataactatattattttgataagtttgatctttttctttagcagcattagatgattgcctttctcatttttttatacaggaaagaggctagctgggagcattataagtgagaagcttgctgcttgtgtgaacatagtgcctggtgagaactacatcctctcttctttttttgtgtttttttttctgtccgcagctatcgatgcactgaactatgcctggtgggaactacgtcctctctcttttttctctatctgcatctatagatgcactgaactaagcgaacaagcaaattggctggactttatatagtggagttcaatgcgaatccatcatattcagttctgtttccatggaaattctgcatattgaactttggtcaactgaatgttcaaaaacaactttaaccaactggcttctctatttcttgagaaacgtaatcaatgaagtgctcatatttgtctagtaatcagaatttctaacagttgccttgccatgactatggtaatgcgggaaaaggtgttcacctgtatgaccatgtggcatttgacaattctgaaacattgatgcagacatgtgcctcttcctgtaagcatcatttggccatgtcgagctccacaacaacagcactgttggaattacacttgatgaaaggggctcaatttagaacatcgcgggatgaaactcacactaattaatgtcatgggctttgggccgggagtcctaggcccatgagatagaattagggtttgttaggattagataaggtttgttaggattagattaagtagccctccatctatataaggagggatcctatcccaggtcagttaggcattagatcaatatttatcttagtgcccatcggcctgccttctcagtgcgacggagagcgtcgcgccgtttaggttcaggaccgtattccttgttcgtgacaacttggtatcagagcttcggttctgtgcccatgggtgccgagatcactgcggttcccaacattagcgaaggtcttgccgagatctcgaagaagatgatgaacttggcggcgcaactccgggccttggcggctcagtcaaccgagccggctgctttccttgaggaggccgaaccattataccggcatgcggtggccttgcgtccgcgagggcgcgcggcgccaagtccgggagtggctgcgcaacctcgaccttgccgctgggactggcgatggcgccgtcgccattggcgccctcaatggtggtggagaagaagacagcgacacaacacgacttgggtgtccggttctcgggcacgatttccaggcgatgcgacgcggtttccgcagttggtggcgcaaattctggcaacggttggagcaaagccaggcggcgtgcatgcggctcgagtcgcgagcgcgacgggtgggcgtggcactcgtgcgtcgcgatggcgtagattgcgccgggtccacacgttggttcgtgaagctcgcggctcgatcacggctgcatcgtttctggcggcgtggcctcgtgaagaacaagaggatagggtttctgtcctctcccaattgggttggctggtctggtctgggtggtttccacgttggcccatgaagcatccgagtcaactatttattcctttgctgttgggctggacaagtgggcttcggtgggaggcatgctcagggtttctgtaggaccaggtcctcctgcgcatgaattgtttcttatttttgttcataataaaagccgagatgtaaaaggcttaagagtcttagtttaggttatggtgttttgtttgagtctagcagggtccgctgcaactcgaggacgagctgctcaaaaagaggggagtaatgtcatgggctttgggccgggagtcctaggcccatgagatagaattagggtttgttaggattagataaggtttgttaggattagattaagtagccctccatctatataaggagggatcctatcccaggtcagttaggcattagatcaatatttatcttagtgcccatcggcctgccttctcagtgcgacggagagcgtcgcgccgtttaggttcaggaccgtattccttgttcgtgacaattaagggctgaaaagaaattgctttatgaatataaacgtggtggtaggtctattagaaatggaactaagtggtttttcttgataactacaacttggcttttgacaagaaacggaaagtacattctctagcttgtggtagctgtctagctgaagctcgacatatttggtctttgattgtcttattggttggaccctcaatgcaacatcagacgtttattaaaaaatactgtagctgttggcaatagctcttctttgtgcataggcactggaatgtggtatggagtggacacgatgatgtgttgttacatgcatgcggcagcatgctattgtgtatcgcgcactttgcaatataatgggacttcatctaaagagagacaaaataatggaattgctaagctgagatatctatatttatcctctctattagttttattctgattcatgattttttggcctactttctatcttacattacattaacatcgactcattttatttagtttttaattttctgtgtccctctttccaggtattgaatctgtttactggtgggaaggaaaggtacatttctattccttctttgggataggttgatttcaagctttagctgttcatttagctttgcactctcactatactcctttaggtcaatgagcgttttgcctattcccttatgtaaaaagatatttagtgatcagcggatatctttttgcaggtgcaaactgatgctgaagaactgctcatcataaagacaagggagtctcttcttgatgcgttgaccgaacacgtgaaagccaaccatgagtatgagtaagttcttttctgtccatcaattttcatctgtttgtcagtatatactgacaggtcgtaaacctaaaatttctctcttgtcgtgatctgagattcactacttgatttcccaatgcagcgttcctgaagtcatcgcgctgcccataaaaggaggcaacctcaagtacctggagtggctaaagaacagcactagggaaagctaactctgtgccgtggcatgctttttcactacatttcgaagcgtctggtgatacgtatactctgcatctccatggcttcggtgtgaagtgtgatggattttcctatcttttacagcttatgtcaaataaactgtagtagcgtgcgtgcatggcagatgttgtacatgaaaccctctcgtgtttgtggagttagacgacatttcgtttctatttgatttttttttgggtgaagtcatgaatctgtcatctgtgttatcacctttcccatgtcaaacccatcttgaatggtggcttggcgtgaggttggtttcgctgtgagtgccccagttaaaagtgaatgcttctggtctggttgcaccgtagcatatgcaatcaggtcttgtcttcctac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0378300, RefSeq:Os10g0378300