Os02g0106700

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Revision as of 02:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0106700| Description = Protein of unknown function DUF1671 family protein| Version = NM_001052164.1 GI:115443698 GeneID:4328021| Length = 3...")
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Gene Name

Os02g0106700

Description

Protein of unknown function DUF1671 family protein

Version

NM_001052164.1 GI:115443698 GeneID:4328021

Length

3798 bp

Definition

Oryza sativa Japonica Group Os02g0106700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:391819..395616

Sequence Coding Region

392093..392148,392296..392395,392604..393400,393520..393634,393831..393926
,394008..394091

Expression

GEO Profiles:Os02g0106700

Genome Context

<gbrowseImage1> name=NC_008395:391819..395616 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:391819..395616 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatctcatcttgccccatctgcaacgtccaggttcttacggctgagctccaatggcatgcgaatgcccattttgacgatgatcaactccaaaccgacatggaattggcccaccaaatcgccctcactcaatccacgcccaatcccctgctgctggacactcatcaagaatgtaacaatctgttcgctggtgatcctcatgctcaaggagcctcctcaagcatcgccggaagctcatcacttcagggaagtgttttggatgagcaagtatcttgcttgctccaagcgcaactccgaagcaatgttcaggaaatacaaggaggtgttatgaacttgttgagagcctgcctggaatcagaagctggttcatcgacaagtatgatatcaggacatgttgatcactatcagagtctttcatcagaagataaggggtggggatgtgggtggagaaatatccagatgctgagctctcatttgctgaagcaaaggccggaagcaagggaggctttatttggtggttctggatttgttcctgacatcccttcacttcagaggtggcttgagattgcttgggataagaaatttgatacccttggctcaagccattttcataacaaagtttatggcgccaagaagtggatagggaccacggaatgtgctgcccttctccgctcttttggtttgcgtgcaagggttgtagattttgatagcacggaatcatcaggtcctcacagtaagaacggaaaacatgcaccaaaaagagtacaagggccaatggacaagttcttgataaagaatgtttctccaacatctacatcttctgaactttgtcgagaagatgctgaaaacatgagaggccaacaggttcttgttgactggatctggaactactttgctagcaggcattctgataactcggacagttcaaggcgtgtgcttgtgagtgataaaaccccattgtatttccaacatcaaggtcattccagaaccatagttgggatccaaaagcaaaatggtcaacatgggaatcaagatcgatttacccttttgattttggaccctggccatagaacgtcagatttggagagggctcttcgaagcaagacaggatggcagcgtctagtgaaaagaggtgtccacactcttaggaagccacagtatcagttgtgctatgtggatcctggaattgctagttcagaagaaatggagcagctgaaaactattgatagtatcctggtcaggttctag</cdnaseq>

Protein Sequence

<aaseq>MISSCPICNVQVLTAELQWHANAHFDDDQLQTDMELAHQIALTQ STPNPLLLDTHQECNNLFAGDPHAQGASSSIAGSSSLQGSVLDEQVSCLLQAQLRSNV QEIQGGVMNLLRACLESEAGSSTSMISGHVDHYQSLSSEDKGWGCGWRNIQMLSSHLL KQRPEAREALFGGSGFVPDIPSLQRWLEIAWDKKFDTLGSSHFHNKVYGAKKWIGTTE CAALLRSFGLRARVVDFDSTESSGPHSKNGKHAPKRVQGPMDKFLIKNVSPTSTSSEL CREDAENMRGQQVLVDWIWNYFASRHSDNSDSSRRVLVSDKTPLYFQHQGHSRTIVGI QKQNGQHGNQDRFTLLILDPGHRTSDLERALRSKTGWQRLVKRGVHTLRKPQYQLCYV DPGIASSEEMEQLKTIDSILVRF</aaseq>

Gene Sequence

<dnaseqindica>275..330#478..577#786..1582#1702..1816#2013..2108#2190..2273#ttccgactccgaccgtccgccgccgtcacctcgccgccgcctcctcccctctccgccatagatacggatcggaggagaaggagggactcactccaatagtatcgtctattattgtttgttgctctcccctcccctcccccgtgcgtacgtctccgattaccaaccaggtcgcccgcctctcgtcgccgaccgggccggagctgctcgatctgctgcagtacgtccagcctgcagcaattcggccgcccgcccgttgagaggagagggagaggagatgatctcatcttgccccatctgcaacgtccaggttcttacggctgagctccaatggtatagctcttcctctttcttgatttcttcttctcctctctagtctctctctacataacgtacagtatgctatgctactgctgcgattttacttacctccattgtggtctgtgcttcaccaaactgattcttttcatcttttgctaggcatgcgaatgcccattttgacgatgatcaactccaaaccgacatggaattggcccaccaaatcgccctcactcaatccacgcccaatcccctgctgctggtctgtactcctccccactactcttattctgctgctcgccttctcattcttaagtttaacctatgctgcaaacatttcctagtaacaattacactcctgtcccgcctattatgcaactagctaaatattgctgtcattgtcctactacttcatctgtttctcctataaggagtgaaaaaaattcccatgtagctgtcctcttttgcaggacactcatcaagaatgtaacaatctgttcgctggtgatcctcatgctcaaggagcctcctcaagcatcgccggaagctcatcacttcagggaagtgttttggatgagcaagtatcttgcttgctccaagcgcaactccgaagcaatgttcaggaaatacaaggaggtgttatgaacttgttgagagcctgcctggaatcagaagctggttcatcgacaagtatgatatcaggacatgttgatcactatcagagtctttcatcagaagataaggggtggggatgtgggtggagaaatatccagatgctgagctctcatttgctgaagcaaaggccggaagcaagggaggctttatttggtggttctggatttgttcctgacatcccttcacttcagaggtggcttgagattgcttgggataagaaatttgatacccttggctcaagccattttcataacaaagtttatggcgccaagaagtggatagggaccacggaatgtgctgcccttctccgctcttttggtttgcgtgcaagggttgtagattttgatagcacggaatcatcaggtcctcacagtaagaacggaaaacatgcaccaaaaagagtacaagggccaatggacaagttcttgataaagaatgtttctccaacatctacatcttctgaactttgtcgagaagatgctgaaaacatgagaggccaacaggttcttgttgactggatctggaactactttgctagcaggcattctgataactcggacagttcaaggcgtgtgcttgtgagtgataaaacgtaagggatgttctcagaaatgttcaatctcaccatctgaaatgcttgcagctttcgtaagtgcatgttaacactacgcttaagaatgttgtacactgactaatgtgtgttattcgcagcccattgtatttccaacatcaaggtcattccagaaccatagttgggatccaaaagcaaaatggtcaacatgggaatcaagatcgatttacccttttgattttggaccctggccatgtaagctgtcgctactattcatttttttaaaagaaaaaggaaaaagaaagttgttattattcactttgtagtatatcattaatttttgttcaattgtgcatattttttattattcaatcttctgtaaacatccagaaaatttgttctacatttctctgccaaattaagatataaactttgctctaacggtttacagagaacgtcagatttggagagggctcttcgaagcaagacaggatggcagcgtctagtgaaaagaggtgtccacactcttaggaagccacagtatcaggtacatcaaatcacccaaaatttatgaactttgaaagggttgtgcagttcatacaattctgatatgccttcgatttttcagttgtgctatgtggatcctggaattgctagttcagaagaaatggagcagctgaaaactattgatagtatcctggtcaggttctagaatgctggtgcgtacaatgagtaatcgtgtcttactttgtcacatgctaatagaggaaaatgatacagtttgctcgctcatgtatatgaaaagtcaaaagataatcaatgatgtacttgatgaaaagtttatgcaaaataacaatggatttacatacctgtattttgttgcttcatacgaattagtaattttggcctacttattgacattcaacattggtcgtctcaattgtctttatctaattatgcaaacatttgttaaatggaggagacaggggaatacatagactacaaggcttgggatgctcttccctgcttggagaaacgtggaccattgatgcattgctgactgctgagctctgcgttgggttttataatgtatgtatggcctgtcatgcttgtctctatagagaagtccaataatttccttttgctttgctcctacttatttaaacattatccggacactgagcattgatgcccttaaagtcattgtttttttagctttatgtatattatttcctttagagttttgttccatctatggttgttctctcttttttagttccattggtttctttcttgtattctaggattatataaattaatttatctattcaagtagcatggtgaaaatattagaaaatcagcaacataagaacaattttgatacagtatttcagcaaatctaagaagtaggagtataaatatgagaatcaatgaactttaagaagataattggtaagcacatattgttattacaatccttcacctctatttacattattctttacttttatgtgcattcaactgacattcatgtcagtattattacgtgtctatgtataacttcttaactttattgttgaatattccttactgcatcctggttgttcatggatctatatactgtatggttctggtagttgaagctggcaaaactgactacatgagcattatgcgtttaccatgaaccttactatgccaattctggaactgtttactgtggtatagatgcagtttacgtagaaatgctttggcaggattgctgctgcttacatgatctgtgaagtaggctgaatgtcttcagattgcttattccagtgcatagctcttgcatcttattctgtgaattaccatgtactatctgaagttgtgaattgatctgcatagagtgtttgcctttattttatagatgccttcttggagaccctcacaagtcacaaccagttcaactgaagtgggcgactttcataatgcatctgattctgaacactggggttgcatttagttacaagatcagattccaatagcaaatcgagaggtgatcggtcccaatagattgtctgaaactggtcaggtcatctgaaccttgacaagatctgtagttgtcatttctgttagaatgtatgccgccttggtaaatattccttggcagatagtagctcttttattatgtgaaacagaacatctgaacgtgactttggtaatattccattctgcatatgttctctcgacgccttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0106700, RefSeq:Os02g0106700