Os02g0109100

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Revision as of 02:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0109100| Description = Similar to Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diph...")
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Gene Name

Os02g0109100

Description

Similar to Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate-5-diphosphate decarboxylase) (MDD)

Version

NM_001052177.2 GI:297598464 GeneID:4328034

Length

3605 bp

Definition

Oryza sativa Japonica Group Os02g0109100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:496750..500354

Sequence Coding Region

499226..499444,499916..500080,500293..500352

Expression

GEO Profiles:Os02g0109100

Genome Context

<gbrowseImage1> name=NC_008395:496750..500354 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:496750..500354 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caagattcggtctcactctcgtcttcctcggtgtctccgccccgccgtctccgatctcccaccaacatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgacagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagcccttccttcccctccgaccgcatgtggctcaacggcaaggagatctccttgtcaggagggaggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtcgaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgttcaacaacttccccactgctgctggtttggcctcttcggctgctggcttggcttgttttggtaaagtctcttacttctga</cdnaseq>

Protein Sequence

<aaseq>QDSVSLSSSSVSPPRRLRSPTNIAVIKYWGKRDEALILPVNDSI SVTLDPDHLSATTTVAVSPSFPSDRMWLNGKEISLSGGRFQSCLREIRKRAQDVEDEK KGIRIKKEDWGKLHVHIASFNNFPTAAGLASSAAGLACFGKVSYF</aaseq>

Gene Sequence

<dnaseqindica>911..1129#275..439#3..62#atcaagattcggtctcactctcgtcttcctcggtgtctccgccccgccgtctccgatctcccgccctcccgcctccgccgccgccggcgactgctcccgctccccgtcgttgcttccgttccggtaagctgcctgggactgtatctagttgaggttgctagtccgaatccctgacgcgcgttgctcgctcttctgggccgcagcagatcggtctccttccatggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccaccaacatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgacagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagcccttccttcccctccgaccgcatgtggctcaacggcaaggtcctcctcctctctactcttccatctctctgctctgctgcttcctactttttttttttgttgttgcttcgcattgatgtttatgctttgttgtcccctctgaataatgggactctgttcatcaaactgatgacaactgctgcttagatctgaataatggcaatctgtttcagtgttcttcccatctacaaattctacaggcagtggagctctaatttccattcttttattattttaaaaaagaatcacattcctgatttcatatgcactagcatctagtatgtgtttctagctttgtttctgttacagtcactgatcctatctaaatacaaactgtcaaatcctagatttacactgtgtgaaacttaaaagtctgtgatctatcaccacgctagaccttaagggatgatcctttactttttttaatggtatactatgtcttaagctggcttttcgttttgaactgtgcaggagatctccttgtcaggagggaggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtcgaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgttcaacaacttccccactgctgctggtttggcctcttcggctgctggcttggcttgttttggtaaagtctcttacttctgatatcaatgatatttccctacttattttgtctcaaatattttcaaatttgataatgccacccaaaatcagacaatggttcaatcatcttattggtgatttttttatttttaaaaaaatctaaatagggtgaatggaagcacatatttatcacctgattgctttttgtagttttcacccttggaaagctaatgaatgtgaaagaagatcatggtgaactttcttccatagcaaggtattttgttgcttgtactcatctgtactgatcaatatgctatggaactgctccttttctccttctggtataactgacaaattcaaatgcaggcaagggtctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaagtgagttatctgatgctatgaaagaggaacagccttggtgaaatttatcgcatatcctttctagcgagtaatgataagttttatactacacttacagaataatgatggaagcgacagcatagctgtacaacttgctgatgaggcacactggaatgatcttgttattatcatagcggtggtatgtgatgtgcatttaacatacctcttactgcgtataatctgttgtagcattactactcctgtctcctggtgttgtggcttcacaaccagtaaatttgaatcggatggtaactctagtattttatcatgctttttaacaacatttactaattatgtcatgtctgacaccttcaaaataattgaatcttccctgtgtaaaataggtcagttcaaagcagaaggaaacaagtagcactagtgggatgcgagacagtgttgaaacaagtccccttttgcaatatagggcccaggtgactgttttgaccgtttaaatttctcatgattcatagaggaagtagagttgggcagttttatactgcagtaaaatattaattgagcttttctgtcaatttagctgttacttcttttttcttatgtcctttgaattgcttgttcttgtattgcagactgtagttccagaacgggtgttgaaaatggaagaggctatcaagtctcgtaattttgagtcctttgccaggttaacttgtgcagatagcaaccaatttcatgctgtatgtttggacacgagccctcccatcttctatatgaacgatacatcacacaggtgatcttttatttatcagtgctctgttttgggcttctgttgctaatgacacatcagctttgacattgctgtctgaattaatcacaggataattagccttgtggagaagtggaaccagtcagaaggaaccccacaggtatactcttcttttctcctttttttttctcaataaactgttgcggtttatggatgtccataccatgaaatagggttggttacatgctgagttcataacaagggtataatggaccataagctcatatggtggcacaaacaatttgtactgccctagccaaaacgtgtatgactcacattgctcaatgatctttgtagaaatagcaaatgtttgactctaagctcattttccacacccttttcacccttttctaattgtcatcagtccattggtgttaatgctatggaggatcatatttaattagtacatatattggatatgatatatataccaattcattactttgttatgatggaaacaaaagcccaaggaatgcacaagataatctggctgtacataatatggcttcgtgataaggaagttctttcattgaaaatccttgtctaggacttatttgtactgtttatgttttctagtatgcatttttcttctatacgagtatggaactagtagacagttgtgctatcaactcttctcattctacaagagctttttttgatggcaggttgcttacaccttcgatgctgggcccaatgctgtcctaatcgcaccaaaccgcaaaaatgcaaccattctccttcagaagctcttgtattatttccctcctcaagataatgatctcagcaggtgcgttaatattgtcatgagtatgacataccaatctatccaagaatctatttgacaaacaaaatgatgcagctatatggttggcgacaagtcgattctaagcgatgctggactgaaatcgatagaagatgtggaggccctcccagctcctgccgagacgaagatgccgagccaaaaattcaagggagatgtgagctacttcatctgtagcaggcttggagctggcccaaaagttgtcactgacgaaagcctagcattgatcgattcggtcacggggctccccaagggagtgtagctgaaactatgtcattcggagagtttgtactgagagcgcaaagcgaattcaacttttgtagggtcataaactcggctttgatgatgtaatatttttctcccgttgacactggctgttattgctgctccaaggacaatactggtaataaaaaaatgatgaaataaattgatcaagtcctgttgttat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0109100, RefSeq:Os02g0109100