Os02g0113400

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Revision as of 02:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0113400| Description = Protein of unknown function DUF544 family protein| Version = NM_001052198.1 GI:115443766 GeneID:4328056| Length = 74...")
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Gene Name

Os02g0113400

Description

Protein of unknown function DUF544 family protein

Version

NM_001052198.1 GI:115443766 GeneID:4328056

Length

7467 bp

Definition

Oryza sativa Japonica Group Os02g0113400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:726578..734044

Sequence Coding Region

726750..727105,727899..728048,728510..728635,728726..729482,729573..729697
,729776..729815

Expression

GEO Profiles:Os02g0113400

Genome Context

<gbrowseImage1> name=NC_008395:726578..734044 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:726578..734044 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcatcatggtggtaggaagaagaagaacaagggtgggaaggggaagcctcggaagaagaccgacgaccgcggagaggccaatgtcgggtcgggcgacagctcgcccgccgtccgcgtcgaggaggaggcggaggtggaggcggaggcggaggtggggacggcggtcgagccgcagcgctcgggaacgttggcctcgcccactgacgtcgtcgaggcagcccaacacggccagcggcagcagcaggcctcccagtcccaacagacaccaagccctcgaagttatgcagctgcagtggtgaacaaaagagaagatgaaacagttggctacaacttccttcagttccttcgaagcttcacagtagagcacagagaagggcctttctatgctggggaactaaagagtatggtctatcagaacagcaaaactttttgtgtctactatgggcacttccaaggacaatatgcaaacctgggtacaaaaatatccaactcatatgcgagggtcgtgggcttcttgcgaagtgctataggaagattcatcaccgaatatgaacttgatgatcaatggagagaaatatcaaatgaccccccaaagattcatattgatgccctgcccccagctggaagcattgtttcacttcaatatttcctgggacaagcacataacaaacttgtggagactgcacgcatctatgatcccaatggtagcttagtcgctgatagtactaagctgggaaggagagtgttcctagggttcctcatatatatcatcaatcagcataaagatggacgcagttggtgtggtgaattttctattgatgatctactagtcagaaatgaatcaacatttggaatcacgaaggcagcttcttcccatgcaagttgtaaagcaatggctaaggatctgaaacagttggcaaagatactagagaaacactttcgcacagctcaagggcaggtccctggctacttcattaagcttttttctgaactaaaagagagcgcaggagagctcgggcagtacaactcagagaaaaccaggaagttccataagtatctgagttcgcatcttgcactcaggtctgcgatgtcaaggaggcacctgtttatggatttgttccgagcgtaccagctacttgggaaaactgcaaagaaggatttgatatcccttctaggatccatgtttccagaagataaatggcttgaccaagtagacaagcaccaaatgtttataaaagtatctgagtatggcatcgtggaaggtgacgcagataaggcatccaacagtcaagatcagaagaagaaaagatcatacagtggcgatcttttagatttgctggtgtttatccgccacgttactgagcacggggcggatcacacgaaagatgataacatggagcaaaaactcaagagtttggttgaaattgacttgataattgctaagtatctttcggctgctgttgtagaccttatcaaggctttggtgaagagtgacttgctaaaagacacgttttctgacccgtggaatgcgttttctaattcttcctaa</cdnaseq>

Protein Sequence

<aaseq>MPHHGGRKKKNKGGKGKPRKKTDDRGEANVGSGDSSPAVRVEEE AEVEAEAEVGTAVEPQRSGTLASPTDVVEAAQHGQRQQQASQSQQTPSPRSYAAAVVN KREDETVGYNFLQFLRSFTVEHREGPFYAGELKSMVYQNSKTFCVYYGHFQGQYANLG TKISNSYARVVGFLRSAIGRFITEYELDDQWREISNDPPKIHIDALPPAGSIVSLQYF LGQAHNKLVETARIYDPNGSLVADSTKLGRRVFLGFLIYIINQHKDGRSWCGEFSIDD LLVRNESTFGITKAASSHASCKAMAKDLKQLAKILEKHFRTAQGQVPGYFIKLFSELK ESAGELGQYNSEKTRKFHKYLSSHLALRSAMSRRHLFMDLFRAYQLLGKTAKKDLISL LGSMFPEDKWLDQVDKHQMFIKVSEYGIVEGDADKASNSQDQKKKRSYSGDLLDLLVF IRHVTEHGADHTKDDNMEQKLKSLVEIDLIIAKYLSAAVVDLIKALVKSDLLKDTFSD PWNAFSNSS</aaseq>

Gene Sequence

<dnaseqindica>173..528#1322..1471#1933..2058#2149..2905#2996..3120#3199..3238#gaggccgaggggttttttactttacccattgccctcccacctgctccccctcctgccctcccaccctcttgtgcgcattccgtcgagcacgtcgcgggcgcacctcccgccgctgcctcggcttgccccaccgcggatcgcagagcgaagcatccccgctaggctactaaagatgcctcatcatggtggtaggaagaagaagaacaagggtgggaaggggaagcctcggaagaagaccgacgaccgcggagaggccaatgtcgggtcgggcgacagctcgcccgccgtccgcgtcgaggaggaggcggaggtggaggcggaggcggaggtggggacggcggtcgagccgcagcgctcgggaacgttggcctcgcccactgacgtcgtcgaggcagcccaacacggccagcggcagcagcaggcctcccagtcccaacagacaccaagccctcgaagttatgcagctgcagtggtgaacaaaagagaagatgaaacagttggctacaacttccttcagttccttcgaaggtatcaactatttcttggattgatgtatcctagagagcataagactagcccaatgtgatttataaaaattgaagatgtgtttcatcagatcaagttcttattacgaacgacatagctgtcctactatgtttcttcttccgacacatgtgtgcacataagtgaagatcctacgtaaaatccagtaatcataataggagttttgggatgggcttaaagcagagaactgaatcgggctctcttttttaaagactggtttgagatattttttgggccttccattgagaaaagaagatgtatgctgggtgtatcatcgcctcaatgctcttctgctaattggctatttatgtagtctgctcgtctccatggctccatatgcatatgcatgtaaatccatttcttttagggaaactaccgtaggagagcatcctacacatgcacatccaattaagctctctgatacaaatatggacatgtttatgagtacatgtcaggattgctccctgcaataatgcaaatatgtctaaattaaatcccaatgatttcatacaatagaaaattcataaaatgccatcataaatataagtgagttgtgaaatactatcgtatacgagaatgatcatgtggggtctggacccacatgttaatgacatatacgatgatatttttcaacttcatgatcttcgtgatagtttttcatgatcatgtggggtctgcacgggcactttttctagtcatattataatttttttgaaggatgtataaatttgttttttgacattatagtctcatgcagcttcacagtagagcacagagaagggcctttctatgctggggaactaaagagtatggtctatcagaacagcaaaactttttgtgtctactatgggcacttccaaggacaatatgcaaacctgggtacaaaaatatccaactcatatgcgaggtgcgacttgctacttatttacattgcctttttccaaatgttatatcagctgaaaatattgatgaatcgctttacaaattcctgccattacctttcgaatttgttaatttatggtgacacaattatatagagagagcatgcatgtggaagtcagaagcaaaagtagttaatagagagcagactgaagacaggagaatatatgaatgactagagagtgtaactttcttttaatgtcaactgaaagtgtatgaataatttcctatgcttcttaggaaatccaattgtggtcaaaatgttcttactaatctcagtaacatgtattctgccaaatactgtggttggaatttatcagattattttggattgtgtagttaagtttatacctcaaatttatggcgtatgttgtatagacagatctttatcttttgcaaatgttgtaactgtgcgttcattctgaacagggtcgtgggcttcttgcgaagtgctataggaagattcatcaccgaatatgaacttgatgatcaatggagagaaatatcaaatgaccccccaaagattcatattgatgccctgcccccagctggaaggtttgctctctacatgagatagaaaagagaaaaggaagtcttatgcgccttgtcttttgagtaaagactaactgtgtcattttaatgcagcattgtttcacttcaatatttcctgggacaagcacataacaaacttgtggagactgcacgcatctatgatcccaatggtagcttagtcgctgatagtactaagctgggaaggagagtgttcctagggttcctcatatatatcatcaatcagcataaagatggacgcagttggtgtggtgaattttctattgatgatctactagtcagaaatgaatcaacatttggaatcacgaaggcagcttcttcccatgcaagttgtaaagcaatggctaaggatctgaaacagttggcaaagatactagagaaacactttcgcacagctcaagggcaggtccctggctacttcattaagcttttttctgaactaaaagagagcgcaggagagctcgggcagtacaactcagagaaaaccaggaagttccataagtatctgagttcgcatcttgcactcaggtctgcgatgtcaaggaggcacctgtttatggatttgttccgagcgtaccagctacttgggaaaactgcaaagaaggatttgatatcccttctaggatccatgtttccagaagataaatggcttgaccaagtagacaagcaccaaatgtttataaaagtatctgagtatggcatcgtggaaggtgacgcagataaggcatccaacagtcaagatcagaagaagaaaagatcatacagtggcgatcttttagatttgctggtgtttatccgccacgttactgagcacggggcggatcacacgaaagtacgggcatatgaaatcttaattttctctttcatttcatatatgtgcaagttcaatttcctgacaagtgttcaaaactttgtctttaaggatgataacatggagcaaaaactcaagagtttggttgaaattgacttgataattgctaagtatctttcggctgctgttgtagaccttatcaaggctttggtgaagagtgacttgctaaaagacacgtactttttcttctcttgtatgtttatttgttttctcttgaaatatatttgttgaaatgattattttccatattgcaggttttctgacccgtggaatgcgttttctaattcttcctaataggtatataaagttttacttattttcctgccatttgatcttctagtaaatttcatagtatccatattctgcatctgcgggtcaactttcttattactactataacaaagtagttgcataatgattactgtcaccgacaataccttgacccgcactatatatgaaaatccgctgcatttcgtgaatagtggctagcactaataacaatatcctgtgagtccactacttacatattacacactatttactgtcccagggcccataggttttttttttttttgccaggtcggccaaaagattcggtcgaccaatttcattaaggaaaaggattttggaaaacattacaaagaagcttacaacgacagtacgctgtcgagatggagaagggctaggccctcatcccgtaagctggagaggaaaaaaaaagtacaatgccctaaggcaaactctaatcagagatgatcgttattacatggttggataactcctgcggtcttccacactaggatttcctccttgatatcctccactagttgctcaggggtgcgcactttctgctcgaagatcctaacattacgctctttccacagagaccagcagattagggcgacaacactgtcaaagatgtccctgtagccggtccgaaaaaacctccttgcgttcgtccaccaatctgttaggttttcttcttcatgtccagacacggggaagctgattccaatccattttttcatcagtagccagactctctgggtgtaatcacaagtgagcaacagatgtgagcagctttcatcttcacgctgacatagcacacaatgttcctcgtgcggccatcccttcttttcaagattgtcggctgttgaacagtgaccctttgcagccagccacaagaaaaatcttactttggaaggtgtcttggtggtccagatcagctcactggagacacagagctccctggccatgaagaacagctcatatgctgaagaaacagataacctcccgtcaggtgttggcccatggggtgtaatactccgttgatgaactttcttcttagcctctgtgacagaccattttcaacctgaaaggaagcaacgaatcatgcgtgcactattaacaatttcttcacagcattattcctgcaaccactttgcttcaaacctgaagccactgttgcccccttgacatcacagaaatcttgtaactccaattagtatggtcacaggtttatgatctgagtatcttggatctcgtagtatcaccttatatgacgggaaccttgtcaccaattttgggacccaacagccctatcaagtctgtcttttacatatttgttggcctcatggctgttgtttcctccaggtctgtacttgtctcctaaataaccaagatcatgaaccttgttgaagtgtttggcacaaagccatggaagttgctgatgttgattttcaagagcttccaagtcttactctctcttatctgtctctggttcccataagagcatgtgaaccatcctgctccaccatcaccacattaatatgatatctggaataattgtgaactcaatgtttacatgtttcttccacaatagagcaagcccaccacttcttccacaatagagcaagcccaccacttcaatatttgacattcccagcaagtacttgaaccaactcgtcctcttctcatctattttagtttagtatctggtaatataaaatgttgaggtcctcttgcttctggaggtccagaagccctcaactgccaggacattccccaattcccagcagttccaagctgttaatcctcgttttggcttgctggcctgtcactgcagcccagactttacaatttctaaagtggtgttttcttcctttttcatcctccccatcatctcttgctttctttaacaaccctgtctctacctcaacctccatcaagtcagcattcctcttactcctttgtttgccctctccccttgctatacgcttcaaagtaccttgccttgtgcctgttgctgtcttttgatcaccgctttctactcttctctgatcccccactttctcatcaagcttatcactggtttgtcttgcgcttgatcactctcctttttagttgttgttgttgttgttataatattgttcttcttcttcttgttgttcttgtggagaagagacaacacgctaatttggatctataacctactaatattaggctttggaaatctgtgatatatcatataaccgagcagactcgacataaaaaagttttcctctgggtcctatctatggttaatagttgccgactacaattgccttgattctttaagtgaaacagttggagagtaccatatgtttatcccagttgaaaaaacagtggttatacccttctttttacaaaaaacagcaggcgagactcctacacatatagccactaaggataatcagaagttagggagtgaaatcggcctgaatcttttggactaccttatgcctgtacttagttaaaacttttcactcctgaataataaattgtgttatgtgtctagatgtgtattacaaatgcatttacatatgtggtttatgcttatctcttattgtactactctgtactattagcacaaatgtgtatgtggataggaatcgtttaaattgtttactttacatgttctggtttgctgaatctatccgtgctgaaaagccttcattaaattagttgttgttttttcttttttttaaaaaaaaaaattctacgatgtgccatggtctgtgcctccatgccaaaggcggggggtggggttatcatctgtggggttacttggtagtttatattaaaaagaagagtaaactaaaaagaattagtggcaaggatcaattctgataaaatttttaaggtttataatcctagcaactgatgccatcagttgtgaatatgaatagctccagcttccagttataatttcaaccatatatattattgaaccctgtttcttaacaccatcatcccaaaaacagaaacaaacagcaatgcaactacaaaagcttcatctatatgaaatcccaattcacatccaacatgtgaaacctacactgatacaatgttatcatatctatgaaacaaacatttgtatgactagctcacccttcagatatctaacaaaataaagcgcaccaacatgcgaataatttgtttgaatgccattgccaaacctacgtaaaccttgtactcttgaattttgctttccatagacactgagttcaaaaaccgatgatccatttccttcctatgactttttagtttatactcgtgaactttgctggcaagcccaaagctttatgtgttgtatcataatagggataatatttttaaaaaaatacaaagaagattacaagatcagaattgacaaaaaatagtggttatatcattggcaatatgggagtggggaacatcgatcgtatttagcatcaaagacttaaatcaccagccccaaccaattcctgcttgcccttggtgtggaagaagtaatccttttatatctgttgatgcaggtgggttagcacgcttgttggagaagagaggcaccactgcatatcttgtattcaaagtgccgtcaaggacttgagagtgcctcgttcagtaatcatagttagctgaagtctgtggtgtaggtgtttagcttccaaacttggttagaattttgagtttcctgcttactggcgtagtatgcttcatatttttttcctttttcttgttttgaggttgggccaggtgaggtaccccccgctctccagtaaggacccctgactgttagttctatgccaggagagtagttttggtgtgatgtgttgggacttgggagttgttcagtctttttgagcttaacctgtaaagttggtacccggcgtgcgtatggatcggagctggtgaacagagaaggaagacgcgcacattggggatgattttggagcgtgttgactgttgaggactggtaggttgctagggaaatcagcataacctggattacagcccttgtttggggggtttgttctctgtcggttggtctgcaatgtttattttaatcccctttcttattgttggctatttcttgtcatgctaccctcatggaaatatcgatcttttacattagcatataaaatattaattattggaccataaataatgcttaaagatataattccatagcaatttaaatcaatggaatatagaatactttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0113400, RefSeq:Os02g0113400