Os02g0116000

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0116000| Description = The start codon is not identified.| Version = NM_001052211.1 GI:115443792 GeneID:4328076| Length = 6082 bp| Definit...")
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Gene Name

Os02g0116000

Description

The start codon is not identified.

Version

NM_001052211.1 GI:115443792 GeneID:4328076

Length

6082 bp

Definition

Oryza sativa Japonica Group Os02g0116000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:853795..859876

Sequence Coding Region

854108..854302,854399..854542,854658..854893,855036..855315

Expression

GEO Profiles:Os02g0116000

Genome Context

<gbrowseImage1> name=NC_008395:853795..859876 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:853795..859876 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agatcgttcatttgcccacttgaagactgccctttcagctacattaggaaagatcacttgaaccgtcatatgcttaagcatcaagggaagttgtttacctgctctatggatggttgtggtaggaagttcagtataaaggcaaatatgcaaaggcatgtaaaggaaatccatgaggatgaaactgctactaaaagcaaccggcagtttgtttgcaaggaggagggctgtaacaaggttttcaagtatgcttcaaagatgaagaaacatgaagaatcacatgtgaaattggactacgtggaagtagtctgctgtgaaccaggctgcatgaagacattcacaaatgttgaatgtttgagggctcataatcaggcttgccatcaatatgttcagtgtgatatctgtggggaaaaacacctgaagaagaacattaaaaggcacctacgagcccatgaggaggtgccatctactgaaaggataaaatgcagttttgagggctgtgaatgctctttttccaataaatcaaatttaaccaaacatataaaggcgtcccatgatcaagtaaaacctttcgcatgtcgattcacggggtgtgaaaaggtgtttccatacaagcatgtcagggacaaccatgagaaatccagcgctcatgtatacactcaggcaaacttcacggagatggacgagcagttactctcgtgtccgagaggtggacggaagaggaaagctgtgactgtcgaaactcttacgcgcaagagggtgaccatgcacggcgacgcttcgtcgttggacaatggaactgagtacctgcgctggttgctttctggtggggatgatgattcgagccaaactcattag</cdnaseq>

Protein Sequence

<aaseq>RSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSMDGCGRKFS IKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVV CCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKNIKRHLRAHEEVPSTERIK CSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYKHVRDNHEKSSAHVY TQANFTEMDEQLLSCPRGGRKRKAVTVETLTRKRVTMHGDASSLDNGTEYLRWLLSGG DDDSSQTH</aaseq>

Gene Sequence

<dnaseqindica>5575..5769#5335..5478#4984..5219#4562..4841#ctcactccccgccgccgccgccgccgctccatcctcctcacggagaagcgcgggaaatcacacctcgtcgcagccaagatctcctccagtccaaacgcatcaaagattccaaggtgggcatccaatcctcgcttgcaaacacaaccaccatgcccaaaaccgatgcctacttaggagttaggaatatgtttcttcgatttggttatcgcgttggtaattcttcgctttcgatttgagcagttaaaagcatgagatagtattaaccaaatcgatcctgatctgtgcgtttagattctgggcttgtggtcagtgttcgttgaaacagcacgaaattgttaatagtctaagcagtgtggatgtcgtatgagttaattgtagctttttttcctagtaattttagctctaattccaggttgtgctgttcgggagagcttcttgcgttgaggagaggggggatgaatagaagcgtttgccaccaccttctcacccagtgcaaaaccataagagagctccaaagaatccacgcccaggccctcacacacggcctccaccccaaccagcagtccatctcctgcaaaatcttccggtcctatgccgagtttggccgaccggctgacgcaggcaggttgtttgatgaaatcccccaccctgacattatctccttcaccagcctcatgtcccttcatctcaagttagatcaccactggaaagctatatccgtgttctctcacgccattgcttctggccaccgccctgatggctttgctgctgtcggtgccctctcggcctctggtggattaggggatcagcgtattggtagcgtggtgcatggcctgatttttcggtgtggattggactctgagttggtcgtttgtaatgctttggttgatatgtattgtcgatgtggcaagtttgagcctgcacggactgtatttgatagaatgcttgtaaaagatgaggtcacttggggtagcatgctgtatggttacatgaagtgtgttggtgtggattcagctttgtcattcttttatcagatgcctatgaagagcactgtttcttggacagcactgatcactggtcatgttcaagacaagcagcctatccaagctcttgagctatttggtaagatgcttttggagggccaccgtcctaaccatattacaattgtaggggtgctatcagcttgtgctgatattggtgctttggatcttggacgtgccattcatggatatggaagcaaatctaatgccaccaccaatataattgttacaaatgctctgatggatatgtatgcaaagagtggaagcattgctagtgcattttctgtatttgaagaagttcagatgaaggacgcattcacatggacaactatgatttcaagtttcactgtccagggtaatgggaggaaagctgttgagctcttttgggatatgctaaggtctgggatacttccaaacagtgtgacattcgtctcagttttgtcagcatgcagccatgctgggttaatacaagaaggcagagagttatttgataaaatgcgtgaagtctaccatattgatccccggcttgagcactatggatgcatggttgatctgttaggacggggtggacttctagaagaagcagaagctctgatagatcatatggatgtcgagcctgatattgttatttggaggtcacttcttagtgcatgcctagctcatggcaatgatagattagctgagattgctggaatggaaattataaagagagaacctggggatgatggggtttatgtgcttctttggaacatgtatgccttatcaaacagatggaaagaagctttggatatgaggaagcagatgttgagtaggaaaatatacaaaaaaccgggttgcagttggattgaagttgatggtgtcgtccatgaatttttggtagaggacaagacacatgatgctagaagggaaatttatgtcaccttggaaatcatggctaggcatctcaagatggatcccataccatctccattagtgttaactgatggagaacacatgctctagaaacacatattgtcctttttttttctttcctttgatgacctctaaccgaactgaggatgatatgctgatatttttttctttttgttagtgacaaggcaccatagttttgttttgatttgtttgattaaccaattagtgatagccagttgtaacacactgatgttatttcattgaaaatgcagaattgtagagatttattttagatgtcgacctgcagatatgctatacctgtattttgtttggtcactctgtcaaaaaaagagtaaagactgcaatgcgtcccagttcatgttatggacttctcctcattttacagctatcttgctgactacatcgctacctctgaatgttttacttgtttacttttttttatatataaatgacttatttatgtgtgccgaatttctaactatctgatttgcctactattagatgtgctctggagatgatattgatggagacatgagggttgaagcaacacaacacagggatataaggcgctacaagtgtgaattttgcacggttgttaggtccaaaaaatgtctcatccgagctcacatggttgctcatcataaggtataaaactacttagatattttaggaatatgggccatattatgccttatgttttaaagacaatgtggactgtattaattaaattgagttatttgaccgttatggttctctgattggagtttaggtccatcaatcaatatatttgtgcttttgtcaattccttctgctcttatccatttgaatcattatatgaatatctgatgccctcacttcaaatttatctataggaagaactggacaaatcggaaatctacaagtcaaatggggaaaaggttgttcatgaaggtgaccacacctgccaagagtgtggtgcttctttccagaagccagctcatctgaagcagcatatgcaaagtcactctgatgaggttggcatttctcatatgtgcatacaacatgatattgcttttttgttggaatggtgctgggattagtttttttggaaacatttaaacataacattcttgtatggtttttctccgtccgctgatctggttgtcaaagaaattgttcttatctacttcaatttgctaaaaacaagtgttttgcaggatatagattcttaactgtgtgaagcattggatcccaaagaactccaaaatgcgatgaggcatatttaatcttgtctggactagtaacaggttgggatgaccacctgtgaagctccaacaggattgcctcctcacgctctttcaggaggtttgtccttgcttgtattagttcttttcttttttactattttgattattattcaacttcatgggatagcctgcatctccttgtttccaattaagtactaatgtctcctttgttgtatgcacatgtgctggaattcattgtttatcaatttgccttgtggtatgctatacatgatatctttaatttttattagtaacaaggttttttacagcatacatatacataaatagtgtttttttacagcatgcataaatggtgaaaactgattactgcttaattattgactagttgctggctattttacatttttttgatattgcaaatcttgtgaaatggatccatgcagtgaatttgggaggttatcttctcctttgttctaatgttctctctcactctctttgggcttctggaacctggttttggaggtccttagttggaacaaagaggggatccaagatcaaaataccatctcagaaagctagggccttctgtaataggttcatttagctcgctatggtgttgatatctccatcatatacaaaactacaatatgttccgttgcaaattatatatgaattgttttagctgataaacacctgtgcacaactttttgctgataaatagtactacttctatttcaggttataagatgttttgactttggtcaaagtcaaactgctttaggtttgacttagtttgtagaaaaaaataataacattttcaacccaagacaaatttattatgaaaatatattaaattattgatttaatgaaactaatttggtattataaatattactatatttgcctataaaattattcaaacttgaagtagtctgactttgactaaagtcaaaacttcttataacctgaaacggagggagtaggcattgaatagaataggttatggatcctttggagaataaggttagcaaatatccttcattcatcctactatttctttggatctccttttgggagctttgagaagaggtgagaggatccaacatcaaaatgtcacctcagaaagctaggactattcatcattggttctcagctcgctatggtgattatactcccttttatctctatcatcttaatggaaaacactgaacatttaggtattcgttgcatattccgttaaccagtttactagataatttattttagataatttataagtatgaaagaaatgtgtaagcttacagcagcttcagttttgactcgttcccttcttgactgtagagatcgttcatttgcccacttgaagactgccctttcagctacattaggaaagatcacttgaaccgtcatatgcttaagcatcaagggaagttgtttacctgctctatggatggttgtggtaggaagttcagtataaaggcaaatatgcaaaggcatgtaaaggaaatccatgaggatgaaactgctactaaaagcaaccggcagtttgtttgcaaggaggagggctgtaacaaggttttcaagtatgcttcaaagatgaagaaacatgaagaatcacatggtatctcctcagttacttatagtagatcaggcgctgccttgtaaatttcagaactaaaaaactgcagctcaatccatgcattatataattaatcatgctaatggtatccccagaattaaattaatttgtgctgttctggcagtgaaattggactacgtggaagtagtctgctgtgaaccaggctgcatgaagacattcacaaatgttgaatgtttgagggctcataatcaggcttgccatcaatatgttcagtgtgatatctgtggggaaaaacacctgaagaagaacattaaaaggcacctacgagcccatgaggaggtgccatctactgaaaggataaaatgcagttttgagggctgtgaatgctctttttccaatgtaagtctattatccccaaatgttctgatgcattgtttgttgtcttcctcttgaactgtagctttagtcgtatctggtgtggattgaaacttgttacctgtccctcctattgcagaaatcaaatttaaccaaacatataaaggcgtcccatgatcaagtaaaacctttcgcatgtcgattcacggggtgtgaaaaggtgtttccatacaagcatgtcagggacaaccatgagaaatccagcgctcatgtatacactcaggtgagttttgctaaccgatctttagctcttctgcgcgcgtcttgtgcttgcccaaatcatttgagtgacaaactgacaagctttaaccacatccaggcaaacttcacggagatggacgagcagttactctcgtgtccgagaggtggacggaagaggaaagctgtgactgtcgaaactcttacgcgcaagagggtgaccatgcacggcgacgcttcgtcgttggacaatggaactgagtacctgcgctggttgctttctggtggggatgatgattcgagccaaactcattagccgtatcatctttgcatctgattgtgatggtcatggtgtcaatggctcaatgctttgtcgtaaaggggtgtgctagcccactcacgttggtagttagatggccgtggtgtttttgttgtaagtagttggtctgaatttagaaagtgcagcagttttagaggaagcctactagtagtatatatttgtagcataatggcgcagtttgagttgtgagttgtaagtattttgattctttactgttttgaccactgttcttggaacctcaaaattatttgacttgttgaatgcaaaaaatgatgtgattacaagtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0116000, RefSeq:Os02g0116000