Os02g0117700

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0117700| Description = Similar to UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)|...")
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Gene Name

Os02g0117700

Description

Similar to UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase)

Version

NM_001052224.1 GI:115443818 GeneID:4328091

Length

3898 bp

Definition

Oryza sativa Japonica Group Os02g0117700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:926031..929928

Sequence Coding Region

926333..926359,926637..926708,926928..927032,927129..927227,927298..927381
,927462..927518,927596..927671,927755..927807,927899..927931
,928100..928165,928244..928290,928403..928460,928556..928628
,928721..928794,928874..928924,929002..929079,929177..929237
,929354..929536,929656..929703,929810..929868

Expression

GEO Profiles:Os02g0117700

Genome Context

<gbrowseImage1> name=NC_008395:926031..929928 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:926031..929928 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgagaagctcgccaagctgcgtgaagccgtcgccggcctctcgcagatcagtgacaacgagaagtccgggttcatcagcctcgtcgcccgctacctcagtggcgaggaggagcatgtggaatgggcaaagatccacacgccgacggacgaggtggtggtgccgtacgacaccctggcggcgccgccggaggacttggaggagaccaagaagctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgcaccggaccaaaatcggtcatcgaagtgcgcaacggattcacattcctcgacttgattgtgatccagatcgagtccctcaacaagaagtatggcagcaatgtcccactgcttctgatgaactcattcaacacccatgaagacaccttgaagattgttgagaaatacaccaattcgaacattgaagtccatactttcaatcagagccagtatcctcgtgtggtagccgatgagttcttgccatggccttccaaggggaagacctgcaaggatggctggtaccctcctggccatggtgatatcttcccatccctgatgaacagtggcaagcttgatttgttactttcacagggaaaggagtatgtgttcattgcaaactcagataacttgggtgctatagtggacatgaagatactgaaccatttgatccacaaacagaatgaatattgcatggaggttaccccgaaaactctggctgatgttaaaggtggcacactgatctcatatgaagacaaggttcagctcctggagattgcacaagttcctgatgcacatgtgaatgaattcaaatccatcgagaaattcaagatcttcaacacgaacaatctatgggtgaacttgaaggctatcaagcgccttgttgaggctgatgcactaaagatggagatcattccaaaccctaaggaagtggatggagttaaagttcttcagttggaaacagcagctggtgcagcaatcaggttctttgatcacgcaattggtatcaatgttccaaggtcccggttcctaccagtgaaggcaacatcagatttgcagctagtacagtctgatctatataccttggttgatggctttgttacacgcaacccggccagaacaaacccatcgaatccctcaattgaactgggtccagagttcaagaaggtcgggtgtttccttggtcgcttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttggtttggctctagcatcacattgaagggcaaggtgaccatcacagcccaacctggtgtcaaactggaaatcccagatggagcagtgatcgagaacaaggatatcaatggccccgaggacctttga</cdnaseq>

Protein Sequence

<aaseq>MADEKLAKLREAVAGLSQISDNEKSGFISLVARYLSGEEEHVEW AKIHTPTDEVVVPYDTLAAPPEDLEETKKLLNKLAVLKLNGGLGTTMGCTGPKSVIEV RNGFTFLDLIVIQIESLNKKYGSNVPLLLMNSFNTHEDTLKIVEKYTNSNIEVHTFNQ SQYPRVVADEFLPWPSKGKTCKDGWYPPGHGDIFPSLMNSGKLDLLLSQGKEYVFIAN SDNLGAIVDMKILNHLIHKQNEYCMEVTPKTLADVKGGTLISYEDKVQLLEIAQVPDA HVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGVKVLQLETAA GAAIRFFDHAIGINVPRSRFLPVKATSDLQLVQSDLYTLVDGFVTRNPARTNPSNPSI ELGPEFKKVGCFLGRFKSIPSIVELDTLKVSGDVWFGSSITLKGKVTITAQPGVKLEI PDGAVIENKDINGPEDL</aaseq>

Gene Sequence

<dnaseqindica>3570..3596#3221..3292#2897..3001#2702..2800#2548..2631#2411..2467#2258..2333#2122..2174#1998..2030#1764..1829#1639..1685#1469..1526#1301..1373#1135..1208#1005..1055#850..927#692..752#393..575#226..273#61..119#gatccgatccgattcatctgtctcatcagatcagcgtgaagcagcggcaagaacacaaaaatggcggacgagaagctcgccaagctgcgtgaagccgtcgccggcctctcgcagatcaggtaattatattagtctcttaattctgaattaattcctcatctgatcgctcaagtttgatctgctgatcgattttgggttttgaatcaaatcattgcatgcgtgcagtgacaacgagaagtccgggttcatcagcctcgtcgcccgctacctcaggtaaacacatcctatcctccatggatgaccatttctgatcaagctgctacttaactgtatgcatctgacgatgaactgattactgaatcgatatgatccaaaattaatgaaaaaaaaagtggcgaggaggagcatgtggaatgggcaaagatccacacgccgacggacgaggtggtggtgccgtacgacaccctggcggcgccgccggaggacttggaggagaccaagaagctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgcaccggaccaaagtatgtgttttcttctcatcaatctcttctcaatttggacattattaggaagacattgttcatcatcatcatcatgtcaatgtaacatagaattaatgttgctcatggcctcgcagatcggtcatcgaagtgcgcaacggattcacattcctcgacttgattgtgatccagatcgaggtgggttcctaaaaacttcacgcaagattcatccattgttgattcatcttgctgcaaactgcattatggcattcggtgacatggctttcttttgcagtccctcaacaagaagtatggcagcaatgtcccactgcttctgatgaactcattcaacacccatgaagacaccttgaaggcaatctcttcttacctgacaaaaccttttctgactgaacaaatttcagagtactaaccggcacgcttttcctgcagattgttgagaaatacaccaattcgaacattgaagtccatactttcaatcaggcatgtctgctgaatttccttgttttcgccaagttttacaaaatgctactgacaccaaaacaaatttgatccaatgcagagccagtatcctcgtgtggtagccgatgagttcttgccatggccttccaaggggaagacctgcaaggatggctggtaagccattcttcatagatcgctacatcagcaagatgaactaggcgaataatttgaattttttacaacctttgcattacacattttttcaggtaccctcctggccatggtgatatcttcccatccctgatgaacagtggcaagcttgatttgttactttcacaggtttgtgattgtcatctaggaatactatcagctcccacatttcatacaaagttttcatgcatgcatgtaatatcaccctttttatcctattgcagggaaaggagtatgtgttcattgcaaactcagataacttgggtgctatagtggacatgagtatccttatatatatagttcttagttattccattaattcaccatattagctttacagactttctggttaagaaaggagagctttttgggaatgtacttaactattgaacagagatactgaaccatttgatccacaaacagaatgaatattgcatggaggtatgtgattgcgtggtatcgaatgagtaagatactacacatatagttggttagtaaagttttaaaatccatttttaggttaccccgaaaactctggctgatgttaaaggtggcacactgatctcatatgaagacaaggttcaggtaaactttggttcttccttgttttaccaaccgcaatgatgcaatttaattacttggagtactgaacatataaacaagttgctgtgctagacttgagtttctttggaggataattttcaaccattatgtaactgctgttttggtgacgataatatttttgctttccagctcctggagattgcacaagttcctgatgcacatgtaagtaatgtaattaagttgtgacatcaaattagactaaatatattatagaacttatctgaggttgctttcacacttttctgaaacataggtgaatgaattcaaatccatcgagaaattcaagatcttcaacacgaacaatctgtaagtggattcatatatagtctttattccattttagatgagattgtcccaatgttatctaatgttgctgccggttttggtagatgggtgaacttgaaggctatcaagcgccttgttgaggctgatgcactaaagatggagatcattccaaaccctaaggtaacaatgcactattactgtccaatgatttgagaagaattaaacaaacaactgacatgtgcaacatataatttcaggaagtggatggagttaaagttcttcagttggaaacagcagctggtgcagcaatcagggtactaacaaattactacataaccatcatcattctttttcctaacatacaaagatgataagtcatatttttgtgtaccagttctttgatcacgcaattggtatcaatgttccaaggtcccggttcctaccagtgaaggcaacatcagatttgcagctagtacaggtctgtatgacactctgagtaaactttttagggtaacactcattctaacttaactgtttcacccttgcagtctgatctatataccttggttgatggctttgttacacgcaacccggccagaacaaacccatcgaatccctcaattgaactgggtccagagttcaagaaggtatagttccttccaacattatttcctcatgcaaaagctttaatttagttcatgagttcaaatgaaattaactgatccttcttcgcgtaatggcaggtcgggtgtttccttggtcgcttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttggtttggctctagcatcacattgaaggtacttttgccaaagttgcttaaaattatagtctttcttgtagttatagttcttacagaaaatatttggactatttttcatgtatttttgaaatactgcatatctgtatgcaaccttttatatgctgtgtttacacaatcttaattcagagtacagcttcacttctcattgatcagtgtttaaacaatgaaatcatatttttctctttatcttttaaagggcaaggtgaccatcacagcccaacctggtgtcaaactggaaatcccagatggagcagtgatcgagaacaaggtactttttctcccaagaagcacaatatcattgatgtagaaatttgcagtttaaaaacagatatcgtatgatctaactttggcacatatgactgtttatctgggatggccatagaaaaacatataactatttatcagtcaggataatttgtagataattcacagcaatacaatcttacatgaggagctaaattttagcattctattcatccactgaaacactattttatttgaaatataaacatatatctcaaacaaaatgtattctctcatttcaggatatcaatggccccgaggacctttgagcgaaaggatgcagagttcacaaagagagatcatatcaccattccatataatcaatcaagctccacgacattgtggagaatatttttgatccaatattgcttcggcataaggaataacaaaattagtacatgtcttttacctacttgactttgcttcttgttctattttctccttgtgagtgggcaaacaagtcatgtcccggcaaaatatcatatgaacatatttggttacatatctgttcaacaatcagcaagaaaacaaaatgttataattccattaacgtttgtcactaaaacctgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0117700, RefSeq:Os02g0117700