Os02g0119000

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0119000| Description = Similar to NBS-LRR disease resistance protein homologue (Fragment)| Version = NM_001052232.2 GI:297598487 GeneID:4328...")
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Gene Name

Os02g0119000

Description

Similar to NBS-LRR disease resistance protein homologue (Fragment)

Version

NM_001052232.2 GI:297598487 GeneID:4328099

Length

5561 bp

Definition

Oryza sativa Japonica Group Os02g0119000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:999809..1005369

Sequence Coding Region

999809..999821,1000456..1001341,1001424..1003221,1003716..1003805,1004034..1004111
,1004513..1004594,1004877..1004958,1005174..1005369

Expression

GEO Profiles:Os02g0119000

Genome Context

<gbrowseImage1> name=NC_008395:999809..1005369 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:999809..1005369 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtatgcgagctattcgtttgcacagtgctctctcaaagctgccgctgatggccacgggtggtggggattccgcgccggcgaaaatcgccgctcccgtccaatccaaaatggaaatattgcagttcctattggtatgaataagcttattaatttacgtcatcttattgctcatgagaaagtgcactcagcaattgatagtgttggtaagttgacctgtcttcagaaattaattttcaaggttcaagatgctgatagttttgagataggacaacttcgagccatgaatgatcttgtaatacttggaatttctcaactcgaaaatgtgaaaactaaaaaagaggccagaagtgcaaggttgatggacaaagagcacctcaaagagttgtcattgtcatggaatgataacatgagctctggacctactgaagagaatacaagatatgatgtgcttgagggtcttgaacctcatggtaatctcaaacatctgcaattaactgggtacagtggtgctacatccccaacttggtttgccagtaaagttacctcgttgcaggtacttcatttagagaactgcacagaatggagaattgttcagtatcttgaaatgctcccactgcttaggaagctgaagttgatcaggatgtggaacttggtggaagtttcaattccttcctatttggaggagttggtcttagttaatatgcctaaattggagaactgtgttggcacgtacggtatagagttgacttcccgtataagggtattgatggtgaaggattgccctcaactaaacgagtttgtgcttttccacagggatcattttcatgctgagcaaaagtcatggtttccatctctcaacaaactcatgataggtcactgttaccgcataataatgtggaaaatccttcctctagaagaaatgcgagcgctcaaggagttggagttaatggatgtgcctattgtcgaagaattgccagttccttctctggaaaagttggtgttaattcaaatgcggagcctgcaaatttgcagtgggataacagcttcacctgtacaagtttcgacttcccaagtggatcaaaatgaatggatatctagtctccgtgaactcactatctatgattgctccagtttggtagtgtcccttcctattccgccctctcctcttatgtcttactcgtccatcaagagactttcagcatttccaacaatggagataaacaataggaagttcactattgaatctgacgagttgagtgaactggatggcaggatcttatcattccataatctgaagggtgttacatcgatctaccttcgaaggtgtccaaacttgactcgtatttcaactgaaggtttcaaccagctcatcactttagagtgtctggttatacaaaagtgtcctaatttgttccagctacagatctcagatcaggcaaataatacttcatctgctacaaacatccctgccctcccatctctcaaatctctcaccatttcatcatgtggcatagcaggtaggtggttaactcaaatgcttcatcatgttaactcccttgagaagttggacttatttgattgtccacagataaagtttctattaaccaatcaacctacagaaagggaagtaaccagcagtttggcttcagcagagataacctcagcaggggatgaacagcttctgcaaattccatgtagtctcctccattctctaatgtggctctccatttctgaatgtccagacctagagttttgtggtggcagtggtggctttgcaggattcacctctcttgtgcagctacagattaagaattgccccaagctggtctcagcattggtgagcgaaacaaatgataatggattactcccaatgtcacttcaagatcttagcctcagtcctctctcagtctcagaaaacttgcagtccttctcccctgaaggccttccctgcctaagaaggttaagcctatgtaggagccagcatttgaagtccatgcagcttcattcctgtacatccttggagtatctgaaaatctcgggatgccgatccctggttgtgttggagggcctcagctcccttcgaagattggacatccagatgaatcctgagctgtcagctgcatggcatctcaaactgcaagaacaagaacaaggtggcaatcaggctcaggtgtttcctccatcacttgttgaacttcacatctcaaatctcgaaggaagcatcagttcgcaatttctgtgtcttccttcagtaacaaaattagcagtgcgagatagtccagccttgaagtctattcagttgaaacactgcatgacactggaaaagctagagattatcaactgcaagttgcttgcttcaatcgaggatttccactcaattagaaaccttagatccttgaaggtacttggcacccgcagcttatctccatatctgcagcaagaggcctctgggatgtggttccgactggaaagtctaatgattgatgatgcagctgtgctctctgtgcacttatgcatacagctcacatctctaagaatcctacaattctggtctatgggcatggcgagcctgacggaggaacaagagagagcactccagcttctcacctccctccgacaacttggtttctcgcggtgccagaagcttgagtcacttcctgcaaatctacgaagccttgacttcctcgaggatgcaaatggactagggatgagagcaattccaggagaggattactgtcgaattgtaatacagtacccaagcgacacagattctaagtggaaagatccaaaaactggagaacctgaaggtttatcatttgagttcaatctctgtgaagctgtagcctcatgggagcaggatgaggtacttttcggagtccagaaagggacacacttcactacatgggagagcatattatcaaatgatggaatgtcttggtgtgatcctggcagagtagtaaagtggcttccaaccaaggacaccattgaagctgctagggctgcttctgagaaactgttgaagagacctggagctggaagcgagggccctttgagctcttgcaccatgataaagaagctcgagaaagtgaagacagcaaaaagatccgttgtccacgatgctgccttgaaccacctggagtacataagaggttccaccaggtaccctctggagcgaaatgctgggggcggttacttctgcatgatcaacgacagatag</cdnaseq>

Protein Sequence

<aaseq>MAAYASYSFAQCSLKAAADGHGWWGFRAGENRRSRPIQNGNIAV PIGMNKLINLRHLIAHEKVHSAIDSVGKLTCLQKLIFKVQDADSFEIGQLRAMNDLVI LGISQLENVKTKKEARSARLMDKEHLKELSLSWNDNMSSGPTEENTRYDVLEGLEPHG NLKHLQLTGYSGATSPTWFASKVTSLQVLHLENCTEWRIVQYLEMLPLLRKLKLIRMW NLVEVSIPSYLEELVLVNMPKLENCVGTYGIELTSRIRVLMVKDCPQLNEFVLFHRDH FHAEQKSWFPSLNKLMIGHCYRIIMWKILPLEEMRALKELELMDVPIVEELPVPSLEK LVLIQMRSLQICSGITASPVQVSTSQVDQNEWISSLRELTIYDCSSLVVSLPIPPSPL MSYSSIKRLSAFPTMEINNRKFTIESDELSELDGRILSFHNLKGVTSIYLRRCPNLTR ISTEGFNQLITLECLVIQKCPNLFQLQISDQANNTSSATNIPALPSLKSLTISSCGIA GRWLTQMLHHVNSLEKLDLFDCPQIKFLLTNQPTEREVTSSLASAEITSAGDEQLLQI PCSLLHSLMWLSISECPDLEFCGGSGGFAGFTSLVQLQIKNCPKLVSALVSETNDNGL LPMSLQDLSLSPLSVSENLQSFSPEGLPCLRRLSLCRSQHLKSMQLHSCTSLEYLKIS GCRSLVVLEGLSSLRRLDIQMNPELSAAWHLKLQEQEQGGNQAQVFPPSLVELHISNL EGSISSQFLCLPSVTKLAVRDSPALKSIQLKHCMTLEKLEIINCKLLASIEDFHSIRN LRSLKVLGTRSLSPYLQQEASGMWFRLESLMIDDAAVLSVHLCIQLTSLRILQFWSMG MASLTEEQERALQLLTSLRQLGFSRCQKLESLPANLRSLDFLEDANGLGMRAIPGEDY CRIVIQYPSDTDSKWKDPKTGEPEGLSFEFNLCEAVASWEQDEVLFGVQKGTHFTTWE SILSNDGMSWCDPGRVVKWLPTKDTIEAARAASEKLLKRPGAGSEGPLSSCTMIKKLE KVKTAKRSVVHDAALNHLEYIRGSTRYPLERNAGGGYFCMINDR</aaseq>

Gene Sequence

<dnaseqindica>1..13#648..1533#1616..3413#3908..3997#4226..4303#4705..4786#5069..5150#5366..5561#atggcggcgtatggtcagctagttcacgctcgatctttaaggacgagccacgcgcggttgatacatacgccatcccgctgatgtacagccaccgtcgactgtctatcgtcggccaatattccagcgtgtggtgtggacgctacactacccatcgtagaagaagatgtgtgctatcgtttcatgtatgcagaacttcctttgcatatctaggtgttgccacattgcaatcatctctattgcaagcttgccgatgcccacaatccaatcatctccatcacaagcttgccggcgtcctccctgctctctcttttatctcctgatctactgacatgtgagagtagtacaaagtgaaagcttttggtaaaagaaactagcccaaagtgaaaactttgtctttagaatggtccatgttaaaacttgggtaaaaataactagaccaacgtgcaatttacttaaaaaaaaaggaaagaaaatcagtccttggcgcgcgccactccgtcgacctcgtctccctcagaatcggcggtcggcggcgtctgctccactgtcaggcaatgcaagcatctaccgcatcttcctctcccggattcgctaatccggcgggtgccccgcaacttctcttctaccggcctctcctctccctgcagcgagctattcgtttgcacagtgctctctcaaagctgccgctgatggccacgggtggtggggattccgcgccggcgaaaatcgccgctcccgtccaatccaaaatggaaatattgcagttcctattggtatgaataagcttattaatttacgtcatcttattgctcatgagaaagtgcactcagcaattgatagtgttggtaagttgacctgtcttcagaaattaattttcaaggttcaagatgctgatagttttgagataggacaacttcgagccatgaatgatcttgtaatacttggaatttctcaactcgaaaatgtgaaaactaaaaaagaggccagaagtgcaaggttgatggacaaagagcacctcaaagagttgtcattgtcatggaatgataacatgagctctggacctactgaagagaatacaagatatgatgtgcttgagggtcttgaacctcatggtaatctcaaacatctgcaattaactgggtacagtggtgctacatccccaacttggtttgccagtaaagttacctcgttgcaggtacttcatttagagaactgcacagaatggagaattgttcagtatcttgaaatgctcccactgcttaggaagctgaagttgatcaggatgtggaacttggtggaagtttcaattccttcctatttggaggagttggtcttagttaatatgcctaaattggagaactgtgttggcacgtacggtatagagttgacttcccgtataagggtattgatggtgaaggattgccctcaactaaacgagtttgtgcttttccacagggatcattttcatgctgagcaaaagtcatggtttccatctctcaacaaactcatgataggtcactgttaccgcataatgtaaactatctattcccatcaatcttgctttagtacaattgcgaattttgttgtgcacttactttgttaaatgatttttcagaatgtggaaaatccttcctctagaagaaatgcgagcgctcaaggagttggagttaatggatgtgcctattgtcgaagaattgccagttccttctctggaaaagttggtgttaattcaaatgcggagcctgcaaatttgcagtgggataacagcttcacctgtacaagtttcgacttcccaagtggatcaaaatgaatggatatctagtctccgtgaactcactatctatgattgctccagtttggtagtgtcccttcctattccgccctctcctcttatgtcttactcgtccatcaagagactttcagcatttccaacaatggagataaacaataggaagttcactattgaatctgacgagttgagtgaactggatggcaggatcttatcattccataatctgaagggtgttacatcgatctaccttcgaaggtgtccaaacttgactcgtatttcaactgaaggtttcaaccagctcatcactttagagtgtctggttatacaaaagtgtcctaatttgttccagctacagatctcagatcaggcaaataatacttcatctgctacaaacatccctgccctcccatctctcaaatctctcaccatttcatcatgtggcatagcaggtaggtggttaactcaaatgcttcatcatgttaactcccttgagaagttggacttatttgattgtccacagataaagtttctattaaccaatcaacctacagaaagggaagtaaccagcagtttggcttcagcagagataacctcagcaggggatgaacagcttctgcaaattccatgtagtctcctccattctctaatgtggctctccatttctgaatgtccagacctagagttttgtggtggcagtggtggctttgcaggattcacctctcttgtgcagctacagattaagaattgccccaagctggtctcagcattggtgagcgaaacaaatgataatggattactcccaatgtcacttcaagatcttagcctcagtcctctctcagtctcagaaaacttgcagtccttctcccctgaaggccttccctgcctaagaaggttaagcctatgtaggagccagcatttgaagtccatgcagcttcattcctgtacatccttggagtatctgaaaatctcgggatgccgatccctggttgtgttggagggcctcagctcccttcgaagattggacatccagatgaatcctgagctgtcagctgcatggcatctcaaactgcaagaacaagaacaaggtggcaatcaggctcaggtgtttcctccatcacttgttgaacttcacatctcaaatctcgaaggaagcatcagttcgcaatttctgtgtcttccttcagtaacaaaattagcagtgcgagatagtccagccttgaagtctattcagttgaaacactgcatgacactggaaaagctagagattatcaactgcaagttgcttgcttcaatcgaggatttccactcaattagaaaccttagatccttgaaggtacttggcacccgcagcttatctccatatctgcagcaagaggcctctgggatgtggttccgactggaaagtctaatgattgatgatgcagctgtgctctctgtgcacttatgcatacagctcacatctctaagaatcctacaattctggtctatgggcatggcgagcctgacggaggaacaagagagagcactccagcttctcacctccctccgacaacttggtttctcgcggtgccagaagcttgagtcacttcctgcaaatctacgaagccttgacttcctcgaggtgctacgtatcgatgagtgccggagcatccgaaggttgccggagatgggcctcccgccttctctcagttaccttgatttgtacggctgctgcgaggagctctgtatgcaaggcagaatggcagaaacggagaagcttaaagttgagattatttacaaacagtgaatcgatccctgtaagacactccagaggtacacctttgtttcccacgagtcacatatttagatcatctttcttaagatgtactgcagcaatgccagtcaccgtatgttgtaatgctgccttgactgacatttcagtgttgctgccagcatcggtgtggtcatcttgcctgtgttcaaggctgcctagtctagattatttctacttataatcaattgcaaacttcgctagagtaacagaaaataaggaaattgttagtgtattcttcttgctggtgacttgacgtttgtcatataaagatctctaatgtgtacttgtgctaaaaaaatcaggatgcaaatggactagggatgagagcaattccaggagaggattactgtcgaattgtaatacagtacccaagcgacacagattctaagtgggtaagttgcacatgtgccgtgtaatttccttctggatgcaggccttccccatttcaattgtagccagctcctgacatagtttgcaaaggcctcttttaattattgcttgcatcctagcttatggttctgaaaatcgccattagcgtgtacaatattcctcgcatactcgtgccaccttttgtgatgcatgtgtttgttttcttagttcttaggcactgatatttgcagaaagatccaaaaactggagaacctgaaggtttatcatttgagttcaatctctgtgaagctgtagcctcatgggagcaggttagcattcattcaactgacatatgtatgtgatttttacagatgtattgaagttcaacattatatgatataacgcaaaacatggcgatcctcagtatatcacaaactatgatgccttattgtccagatgtttgtagatcacagtattagttattgttatggacttatggatcacagtattctatttagttattgttatggactcatggtcactcagttgttgttttcctaggtctgcaatagcacaacaatactcacaaagctgttattacagtgtcgacatgtatggatttacagtagacccaggatgcaaggaatggttggtgctattgatcttacgtactaaatatgatgtatgttgatctgcagatcttcttacagttgatgtgatgatctttcaggatgaggtacttttcggagtccagaaagggacacacttcactacatgggagagcatattatcaaatgatggaatgtcttggtgtgagtttctcatttcccctaatccgaactaatagaaccattcctacatggagggattattacttagccacactgttatcgtgtgaagagattgacttgttgatttcttaaagaaaagggtaaattggagccatgccattataattttgcaaagtttgagatatgccattggtatatcaatgacatgtagaacccacatgagtcaatgacatgtgggtcaggatggtatatctcaaattttgcaaaatgtgcagcttgtaaaaatccactcacctatgcgaggtgatcctggcagagtagtaaagtggcttccaaccaaggacaccattgaagctgctagggctgcttctgagaaactgttgaagtaagttttgtggccttcctttgtttagcatgattcttgctcccagttgtcaagcactccatgtccatggcaactctacttaggggcttatttactggatgttgatttccatctgtttggttttggtgcttgaattaactaaattaatcagatacaatatcatcacgccacaagttgtataacttgaaacctcctcgttgcaaaatgcactataggagacctggagctggaagcgagggccctttgagctcttgcaccatgataaagaagctcgagaaagtgaagacagcaaaaagatccgttgtccacgatgctgccttgaaccacctggagtacataagaggttccaccaggtaccctctggagcgaaatgctgggggcggttacttctgcatgatcaacgacagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0119000, RefSeq:Os02g0119000