Os02g0119400

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0119400| Description = Similar to Syntaxin 52 (AtSYP52)| Version = NM_001052236.1 GI:115443842 GeneID:4328103| Length = 2636 bp| Definitio...")
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Gene Name

Os02g0119400

Description

Similar to Syntaxin 52 (AtSYP52)

Version

NM_001052236.1 GI:115443842 GeneID:4328103

Length

2636 bp

Definition

Oryza sativa Japonica Group Os02g0119400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1022101..1024736

Sequence Coding Region

1022387..1022518,1022627..1022671,1022750..1022850,1023102..1023205,1023352..1023453
,1024190..1024404

Expression

GEO Profiles:Os02g0119400

Genome Context

<gbrowseImage1> name=NC_008395:1022101..1024736 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1022101..1024736 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggatgacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctcgaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatgtcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatgaaagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgctctagcagtcaatgaagaacttaccctgcatacaagattgattgatgatttggatgattatgttgatgttacaaactcacgtcttcagcgcgtgcaaaagaggcttgctattctgaataagcgcgtcaaaggtggctgctcgtgcatggccctgctgatatctgtcgttgctatagtgtttcttgcggtcattgcttggcttctcatcaagcacctgtaa</cdnaseq>

Protein Sequence

<aaseq>MASSSDPWVREYSEASRLADDVTSMIADRGSLPQSGPEIMRHTS AIRRKITILGTRLDSLEALLSRIPPKSITDKELHKRQDMLSNLKSRAKQMATSFNMSN FANREDLLGQSKKAADDMSRVAGLDNQGIVSLQRQVMKEQDEGLEKLEETVLSTKHIA LAVNEELTLHTRLIDDLDDYVDVTNSRLQRVQKRLAILNKRVKGGCSCMALLISVVAI VFLAVIAWLLIKHL</aaseq>

Gene Sequence

<dnaseqindica>2219..2350#2066..2110#1887..1987#1532..1635#1284..1385#333..547#caacaccaaaaaggggaaagcaagcaaatcgcaagcaatcgcgcggcgtcgccgactcgccggcggcgaatccaccgacgagcaatccagccccccaatcccgccgccgcaccaccgcgcatacgatccgccaggttctccgatccatcccccctccctctcccccgttcaattcgcgctctccgcctcccgatcggtaaccatttagggatagatatctattgggaatcgatgattctcgtgggtttggggggttgaattgaatcctcgatgaattttgtgaggtggtgacctgatggttttgagttgattgggtgggcaggaaggaaggaatggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggatgacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatgcgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctcgaggccttgctgtccaggattcctcccaagtccatgtataccactcttctacttattttctgtttgtgtactaatatgggttgttcatatgatggattgatggtgttggagtcgcagttattagcttgtataaatgttaaggaatgtctctggtcctggtttaacttaaggcggaatcgaattcgattagaattgttactctttgcacactgacctgtccacttttcacccttgtgattcacctgctggatcaaacttatggagagagagatacgagataaattagagttggttgcacttgtgtgcctggggttgagacttcattacgagataaattagaagcgttgctgtccaggattcctccaaagttcatgtgttgcttccttccttccttcataacactgctactacttaatttctgtttgcgtactaatatgggttgttcatatgttggtgatggaatcacagttagcttgtacaaatcttatggaatctgtcggtcccctgattaacttacgccgcgatcgaattcatttagaattgttacccttacacgttgacctgtccacttttcacccttgtgattcaccttctggatcgaacactaaattagagttggttactcttgtgtgcctgggttgagacttcattaaagtagatgctgttcgatatttctccctatatctgagggattatcggcaattcgggattatgattctagtgaaaaaaaaagattgctactggtattcatgctgttctctcattatgcagcacggacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatgtcaaactttgcaaacaggtctgttcttgttctcagatatcaacctggtagcctgatacagttatttgccttgttctctcgaaataaagataactggttgatgctttgacatgttgcaatttgttcagaagcatattaatggaaatctttgtttgtatttttagggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagtagctggtttggataaccaaggaatcgtttcacttcagaggcaagttatgaaaggtactaacgcatgacttgtttctattattatcattcatgcatcactcttaatttattttttttggaattctattggaatgtgtgaagtaaagcacccctgatatattctaagtggcccgatctgttcgcagagttgcattttgtatttacttgtatatatctagatggttacaaacagtagcttttagtacgggaaacaattattgcattgtagctaattcatttatcttgcctgttgcaacaatccgcagaacaagatgagggtcttgagaagctggaagagacagtactgagcacaaaacatattgctctagcagtcaatgaagaacttaccctgcatacaagattgattgttagtttattctcacaaaaccatatgaatttatgttcctagcacttgataacaactgatctattgtggtttttgcaggatgatttggatgattatgttgatgttacaaactcacgtcttcaggtatatttttggtacttctttatacaatcatcaggaaagtttcactgttatatagttatttcaagcttatgcgaactgaattttgacataaatctttctttgattcagcgcgtgcaaaagaggcttgctattctgaataagcgcgtcaaaggtggctgctcgtgcatggccctgctgatatctgtcgttgctatagtgtttcttgcggtcattgcttggcttctcatcaagcacctgtaacctgtgtctaactcaaatcagtttgaaatgtgcagtctttcaaagatgtggatgctcccatctcatctctgtttcgtgagagtgtggaaaatggaatataattgcaacaaatcttcgttcagaagatgtgcaaaaagtatgttgcaacgttgcattgacacttgccaacaatttgtatagagcgtattgcctttctgtcgtaatcttttcacaaattcttattcttgcgagacttgaattttaacaagtgttctaaacatactgaaaaaacacgcatattgatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0119400, RefSeq:Os02g0119400