Os02g0120200

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Revision as of 02:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0120200| Description = Similar to Phospholipase D nu-2 (Fragment)| Version = NM_001185848.1 GI:297720828 GeneID:9266665| Length = 4335 bp| ...")
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Gene Name

Os02g0120200

Description

Similar to Phospholipase D nu-2 (Fragment)

Version

NM_001185848.1 GI:297720828 GeneID:9266665

Length

4335 bp

Definition

Oryza sativa Japonica Group Os02g0120200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1061877..1066211

Sequence Coding Region

1061894..1062958,1063039..1063153,1063711..1064214,1064290..1064355,1064745..1064902
,1065245..1066069

Expression

GEO Profiles:Os02g0120200

Genome Context

<gbrowseImage1> name=NC_008395:1061877..1066211 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1061877..1066211 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttagcttagctagcccccgaagcggccgagctccggtcatcatgtcttggtccggcgagctgtcgccgccggcggcggcgtcggggactcgcctcctccacggcgacctcgacctcaccatccacgaggcgcgcggcctccccaacatggacttcctctccaccctcctccgccgcctctgcctctgcctccggccgccggcgagacggcccagccccggccagagccgcggctctgtcccggccgacgaagacggccgccgccagccgcacggccaccacctcctcccgacgtccgacccgtacgccgccgtcgtcgtcgccggcaacacgctcgcccgcacccacgtcgtccgcgactccgaggacccagagtggtccacccatgtcctgctccacctcgcccaccacgccaccggcgtcgccttccacgtcaaggacgccgaccccttcggctccgacctcatcggcgtcgccatcctccccgccgccgacgtcctcgccgcggccgccgcgcccatcgtcaggagggagctccccctgtaccgccccgacggccgcgggaggccgaagcccagctccgccatcgtcatcaccgcctcgttcgtccccgccggcgagcatcagagcatctacgacgcggaacacggcggcgtcccggcggcctacttcccggcgcggcgcgggtgcgaggtgaagctgtaccaggacgcgcacgtggccggcggcgagctggacggcgtgcggcggcgcggggtgttcgagccggggcggtgctgggaggacatgtgcctggcggtgctcggggcgcagcacctggtgtacgtggcggggtggtcggtgaacaccaaggtgcggctcgtgcgggaggcgatgtcgccggagatggcggcgaaggtggaggaggtgcggacgacggcaaccgacgacgacgacaatccggtggcggcggagggcatgtcgctgggcgcgctgctcaagtacaagtcgcaggagggcgtccgtgtctgcctcctcgtctgggacgacaagacctcgcacgacaccttcttcctcaagacaggcggcttgatgcaaacacatgacgaggagacgaagaagttcttcaaggactcgtcggtgatctgcttgctgtcgccgcgatacccaagcagcaagctcagcatggccaagcagaagcgtgcagattgtggggacgatgtacacgcagcaccagaagtgcctgctggtggacacgccggcgtcggggagcacgcggcggatcacggcgttcctcggcggcctcgacctcgccgcggggcgctacgacacgccgtcgcacaggctcttcgccgacctcggcaccgtcttctccggcgacgtctacaaccccgcgatcccgccggcggggaacaagggcggcgccggcgaggaggggccgcggcagccgtggcacgacatgcactgccgcgtcgacgggccggcggcgtacgacgtgctggagaacttcgagcagcggtggaggaaggcgacgaagctgttcagaagggccaaggcgcactggaaggacgacgccttgctcaagctcgagcgcatctcctggatcctcagcccctccgactccggcgccggcgacggcgacggcggcgacagccacctctacgccttgcccgatggtcaccccgattgctggaacgctcaggtgttccggtcagtggactctggatcagtgaaaggattgcctcgttgctgggagacaaaaaagatggaggcgaagcacctggtgtgcgacaagaacgtgacggtggagcagagcattcacacggcgtacgtccgggcgatccggtcggcgaagcgcttcatctacatcgagaaccagtacttcatcggatcatccttcgcatggccatcctacaagcaccaagaaggtgctggaaatctggtgccgatggagatcgcgctgaaggtggcgagcaagatcgccgccggcgagaggttcgccgtgtacatcgtgatcccgatgtggccggagggggttccaacctcgggccccatccaggagatcctcttctggcagaggcagacgatgcaggcgatgtacgaggtgatcgcggcggcgatcagggcggcggggatggagggcgcggcgcacccgcgggactacctcaacttctactgcctcggcaagcgggaggcggcggcggcggcggcggcgggctcgccggagcaggagcacaacccggcggccagcagcgcgcggcggcaccggcggttcatgatctacgtgcactccaaggggatgatcgtggacgacgagtacgtcatcgtcggctccgccaacatcaaccagcgctctctcgccggctcgcgcgacaccgagatcgccgtcggcgcctaccagcccaatctccgcgccggcgccggcgccggcgacggccaggtgttcggcttcaggatgttgctgtgggaggagcacctgggcagcagcgagtggcgggagctgaggtcgccggagtcgccggagtgcgtgaagcgggtgaacgagatagcggcggagaactggaggaggtacgccgccgacgacgacgatgtcgccatgcaggggcacctcatgaggtacccggtggacgtcggcgacgacggcaagatcagcgagttgcgcgggcacgagttcttccccgacgtcggcgggaggatccttggctccaccaacaacaactactgggattatctcaccatgtaggcatgtag</cdnaseq>

Protein Sequence

<aaseq>MVSLASPRSGRAPVIMSWSGELSPPAAASGTRLLHGDLDLTIHE ARGLPNMDFLSTLLRRLCLCLRPPARRPSPGQSRGSVPADEDGRRQPHGHHLLPTSDP YAAVVVAGNTLARTHVVRDSEDPEWSTHVLLHLAHHATGVAFHVKDADPFGSDLIGVA ILPAADVLAAAAAPIVRRELPLYRPDGRGRPKPSSAIVITASFVPAGEHQSIYDAEHG GVPAAYFPARRGCEVKLYQDAHVAGGELDGVRRRGVFEPGRCWEDMCLAVLGAQHLVY VAGWSVNTKVRLVREAMSPEMAAKVEEVRTTATDDDDNPVAAEGMSLGALLKYKSQEG VRVCLLVWDDKTSHDTFFLKTGGLMQTHDEETKKFFKDSSVICLLSPRYPSSKLSMAK QKRADCGDDVHAAPEVPAGGHAGVGEHAADHGVPRRPRPRRGALRHAVAQALRRPRHR LLRRRLQPRDPAGGEQGRRRRGGAAAAVARHALPRRRAGGVRRAGELRAAVEEGDEAV QKGQGALEGRRLAQARAHLLDPQPLRLRRRRRRRRRQPPLRLARWSPRLLERSGVPVS GLWISERIASLLGDKKDGGEAPGVRQERDGGAEHSHGVRPGDPVGEALHLHREPVLHR IILRMAILQAPRRCWKSGADGDRAEGGEQDRRRREVRRVHRDPDVAGGGSNLGPHPGD PLLAEADDAGDVRGDRGGDQGGGDGGRGAPAGLPQLLLPRQAGGGGGGGGGLAGAGAQ PGGQQRAAAPAVHDLRALQGDDRGRRVRHRRLRQHQPALSRRLARHRDRRRRLPAQSP RRRRRRRRPGVRLQDVAVGGAPGQQRVAGAEVAGVAGVREAGERDSGGELEEVRRRRR RCRHAGAPHEVPGGRRRRRQDQRVARARVLPRRRREDPWLHQQQLLGLSHHVGM</aaseq>

Gene Sequence

<dnaseqindica>18..1082#1163..1277#1835..2338#2414..2479#2869..3026#3369..4193#acgctttcacaccgttaatggttagcttagctagcccccgaagcggccgagctccggtcatcatgtcttggtccggcgagctgtcgccgccggcggcggcgtcggggactcgcctcctccacggcgacctcgacctcaccatccacgaggcgcgcggcctccccaacatggacttcctctccaccctcctccgccgcctctgcctctgcctccggccgccggcgagacggcccagccccggccagagccgcggctctgtcccggccgacgaagacggccgccgccagccgcacggccaccacctcctcccgacgtccgacccgtacgccgccgtcgtcgtcgccggcaacacgctcgcccgcacccacgtcgtccgcgactccgaggacccagagtggtccacccatgtcctgctccacctcgcccaccacgccaccggcgtcgccttccacgtcaaggacgccgaccccttcggctccgacctcatcggcgtcgccatcctccccgccgccgacgtcctcgccgcggccgccgcgcccatcgtcaggagggagctccccctgtaccgccccgacggccgcgggaggccgaagcccagctccgccatcgtcatcaccgcctcgttcgtccccgccggcgagcatcagagcatctacgacgcggaacacggcggcgtcccggcggcctacttcccggcgcggcgcgggtgcgaggtgaagctgtaccaggacgcgcacgtggccggcggcgagctggacggcgtgcggcggcgcggggtgttcgagccggggcggtgctgggaggacatgtgcctggcggtgctcggggcgcagcacctggtgtacgtggcggggtggtcggtgaacaccaaggtgcggctcgtgcgggaggcgatgtcgccggagatggcggcgaaggtggaggaggtgcggacgacggcaaccgacgacgacgacaatccggtggcggcggagggcatgtcgctgggcgcgctgctcaagtacaagtcgcaggagggcgtccgtgtctgcctcctcgtctgggacgacaagacctcgcacgacaccttcttcctcaagacagttgcgttgcgtaccaactcaattcaactctgttcttgaatttttgtcaaagaaaattgaatttggatttgatttctcagggcggcttgatgcaaacacatgacgaggagacgaagaagttcttcaaggactcgtcggtgatctgcttgctgtcgccgcgatacccaagcagcaagctcagcatggccaagcagaaggcaagatataattaattactcaatcatttccaaaatatattactccttttatttttcacatcgtcttatttaaaatatatataaatattatttatttttgttatgacttgttttactatattcttattaataacttactccctccgtcccaaaatataatctttttttttaccttgatatggtctccgagatgctattttgaccaacaatattaagatgctttaaataaaaatagttgcatattataatagtttgtttaatgataaatctagtaacatcaattttacatgtttgatttttttttattttttgttattaatggtcaaagttgaaaaaatatttgacttattactatgctaaaaatacttatattttagaatggggtatatacttttacatatttatgctaaacttttagataaaataataattaaacgatacgtgaaaagttaacggcgtttgaaacgaaagtagtatcacaagtaaatctcgattaaaaatggtgcaatgcaagcaaagcatgcaagacccaatgctgagaggggcgtgtcagccagcgtgcagattgtggggacgatgtacacgcagcaccagaagtgcctgctggtggacacgccggcgtcggggagcacgcggcggatcacggcgttcctcggcggcctcgacctcgccgcggggcgctacgacacgccgtcgcacaggctcttcgccgacctcggcaccgtcttctccggcgacgtctacaaccccgcgatcccgccggcggggaacaagggcggcgccggcgaggaggggccgcggcagccgtggcacgacatgcactgccgcgtcgacgggccggcggcgtacgacgtgctggagaacttcgagcagcggtggaggaaggcgacgaagctgttcagaagggccaaggcgcactggaaggacgacgccttgctcaagctcgagcgcatctcctggatcctcagcccctccgactccggcgccggcgacggcgacggcggcgacagccacctctacgccttgcccgatggtcaccccgattgctggaacgctcaggtacatgataaaccgatcgattgatacttgaaatcgatggagataattttaatttcttggtgataaaactggcaggtgttccggtcagtggactctggatcagtgaaaggattgcctcgttgctgggagacaaaaaagatggttaataatctcttcttctctcttcatcaatggctcatcgtcattaacttatcaatcaatcaatcaataatcgacgtactccctccgtattttaatgtataacgttgttaaatctattatcaacatttggccatttgtgttatttaaatttttttacagatataaagatatttatgtcatgtttaaataacgtttgatgataaatcaagtcgcaataaaatatatggtacttagataaattttttaaataagataaatgataaaaaatgtatcttaaaaaataaatagtgtcataaatttaaaaaataaatagtgtcataaattaaaatacggatggagtaataaaatggtactccatcaaatagctgaagcatcgatatgcgatgcaggaggcgaagcacctggtgtgcgacaagaacgtgacggtggagcagagcattcacacggcgtacgtccgggcgatccggtcggcgaagcgcttcatctacatcgagaaccagtacttcatcggatcatccttcgcatggccatcctacaagcaccaagaaggcaggcaccatctgaatttgctgaatttgtctcatcacttgtctgaatcggtaaaaatacatggagcttagtggttgcagtcacctgagtaacaccctgacaccctaaggtcatgagtttaaatcttcatacgagcgaattacaattaggttatttgaggactaaattcctaatttcatattgggttatttgaaggctaagttctcagtttgttagactaagctcttattttaaaaagattcatatgtccggttggatgtagaggctgtaccaaaaataccattctctaacaaaattgtctgaatatgctgcacactgatgcatgtatatgtgtgtgtgcaggtgctggaaatctggtgccgatggagatcgcgctgaaggtggcgagcaagatcgccgccggcgagaggttcgccgtgtacatcgtgatcccgatgtggccggagggggttccaacctcgggccccatccaggagatcctcttctggcagaggcagacgatgcaggcgatgtacgaggtgatcgcggcggcgatcagggcggcggggatggagggcgcggcgcacccgcgggactacctcaacttctactgcctcggcaagcgggaggcggcggcggcggcggcggcgggctcgccggagcaggagcacaacccggcggccagcagcgcgcggcggcaccggcggttcatgatctacgtgcactccaaggggatgatcgtggacgacgagtacgtcatcgtcggctccgccaacatcaaccagcgctctctcgccggctcgcgcgacaccgagatcgccgtcggcgcctaccagcccaatctccgcgccggcgccggcgccggcgacggccaggtgttcggcttcaggatgttgctgtgggaggagcacctgggcagcagcgagtggcgggagctgaggtcgccggagtcgccggagtgcgtgaagcgggtgaacgagatagcggcggagaactggaggaggtacgccgccgacgacgacgatgtcgccatgcaggggcacctcatgaggtacccggtggacgtcggcgacgacggcaagatcagcgagttgcgcgggcacgagttcttccccgacgtcggcgggaggatccttggctccaccaacaacaactactgggattatctcaccatgtaggcatgtagctgcctctgcattcccaaattactattcggattaatatatgggactttctaggtgtcttttgacagaaaaaacctccctaaatcttgcaaattatgaaccgttggatcaatcgtgcaacataagtaaaacctacttttcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0120200, RefSeq:Os02g0120200