Os02g0123400

From RiceWiki
Revision as of 02:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0123400| Description = Conserved hypothetical protein| Version = NM_001052269.2 GI:297598508 GeneID:4328138| Length = 3289 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0123400

Description

Conserved hypothetical protein

Version

NM_001052269.2 GI:297598508 GeneID:4328138

Length

3289 bp

Definition

Oryza sativa Japonica Group Os02g0123400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1223588..1226876

Sequence Coding Region

1225219..1226826

Expression

GEO Profiles:Os02g0123400

Genome Context

<gbrowseImage1> name=NC_008395:1223588..1226876 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1223588..1226876 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgccgccgccggccgccgccgtggccctcgccgacctcctcgagtccggcaccttcgcgccaccgtcgccgcctcgaccccccgccccgaccaccatcctctccgcgtggtcgcacctccgcaaccccacctcccccgccgccgccgacgccctcgccgccctggagaccctccacctccaccgccgctcgctccgcctctcctccgcccacgtcgcgctcctcctcccgctgctcccgctccacccgcgcctcgtctcgccgctgctcgccaccagcccgcacctcctcccgccgtctctccccgcctctctccccgtctcacctcgcctcctcctcctcggcgcactcgcctcctctaggagtgctaagagcctctccagccatgccaattcggggagcacagcagcagagaatctcggcggcggcggcggcgagtccggcgatggccatgatagcgatcctgttgtggctgtagctcgcattcttgatgacatggagaaggggagcgagagctgccatgatcttgatcacctggctcttgctggtattggttgcgtgttggcatctgctgatgagctgcagtttagaagaattattggatccttgcttacgatttgcgggaggatcgggagcctgtctgttggtgttaggatgcttaagctggtggagtggttgttgctgggcttcattgagtcgaggaagatgcgcaaagttcaggttctattcgagatgatttcaccggagtcgtgtcagagccagggctatgttatgtctccggtggtgatggtagcttgtggtgccctgagggcattgagggttgcttcagcgagataccggctggattttgatccacggttgaaggaggcgcctgagcggactatccgatttgcagctgagaaggcagttttagaagggaaacacgtcgatgataggcgtttacttcttcaatgtgttgcattgggcttgacgcagtgtgggcaggtcactcctcatgagtcagtgttgcgttgtgtctgtatggcgctactggaggagcttcttcctctgccagatttgctcaagatgtctgtgcaatgtccagatgggaattcacctgaaattgtcaagaatcgggtgaagcaacatctggatagtgtgcttttcaaggaggctggacctgttgctggaattctctgtaatcagtattcatttgccagtgataaggctaaaacttctgttgaaacgtgtgtatgggaatatgcacaagtgctgtattgtcatcttcgtgcagcagtaattttgcatcaggggaagcaggatgatttgatcacagatattgagaagatcgccgaggctgcattccttatggttgtagtcttttcagccgaggtcactaagcacaggttgaatgctaagtcctcagagggattccaaccagatgttgctgttaagatcttggtgtccttctcttgtttggaacatctgcgacgcttgcgccttcctgagtacactgaggcagtccggcgtgctgttcttgtcaatcaggaaaatgcggcagttgctgctttgttcattgagtcaattccttcttatgctgaattgacaagtaaaccaggttga</cdnaseq>

Protein Sequence

<aaseq>MATPPPAAAVALADLLESGTFAPPSPPRPPAPTTILSAWSHLRN PTSPAAADALAALETLHLHRRSLRLSSAHVALLLPLLPLHPRLVSPLLATSPHLLPPS LPASLPVSPRLLLLGALASSRSAKSLSSHANSGSTAAENLGGGGGESGDGHDSDPVVA VARILDDMEKGSESCHDLDHLALAGIGCVLASADELQFRRIIGSLLTICGRIGSLSVG VRMLKLVEWLLLGFIESRKMRKVQVLFEMISPESCQSQGYVMSPVVMVACGALRALRV ASARYRLDFDPRLKEAPERTIRFAAEKAVLEGKHVDDRRLLLQCVALGLTQCGQVTPH ESVLRCVCMALLEELLPLPDLLKMSVQCPDGNSPEIVKNRVKQHLDSVLFKEAGPVAG ILCNQYSFASDKAKTSVETCVWEYAQVLYCHLRAAVILHQGKQDDLITDIEKIAEAAF LMVVVFSAEVTKHRLNAKSSEGFQPDVAVKILVSFSCLEHLRRLRLPEYTEAVRRAVL VNQENAAVAALFIESIPSYAELTSKPG</aaseq>

Gene Sequence

<dnaseqindica>51..1658#aactcctctcaattaatccccaaaactccaatccaattccaagcccagccatggcgacgccgccgccggccgccgccgtggccctcgccgacctcctcgagtccggcaccttcgcgccaccgtcgccgcctcgaccccccgccccgaccaccatcctctccgcgtggtcgcacctccgcaaccccacctcccccgccgccgccgacgccctcgccgccctggagaccctccacctccaccgccgctcgctccgcctctcctccgcccacgtcgcgctcctcctcccgctgctcccgctccacccgcgcctcgtctcgccgctgctcgccaccagcccgcacctcctcccgccgtctctccccgcctctctccccgtctcacctcgcctcctcctcctcggcgcactcgcctcctctaggagtgctaagagcctctccagccatgccaattcggggagcacagcagcagagaatctcggcggcggcggcggcgagtccggcgatggccatgatagcgatcctgttgtggctgtagctcgcattcttgatgacatggagaaggggagcgagagctgccatgatcttgatcacctggctcttgctggtattggttgcgtgttggcatctgctgatgagctgcagtttagaagaattattggatccttgcttacgatttgcgggaggatcgggagcctgtctgttggtgttaggatgcttaagctggtggagtggttgttgctgggcttcattgagtcgaggaagatgcgcaaagttcaggttctattcgagatgatttcaccggagtcgtgtcagagccagggctatgttatgtctccggtggtgatggtagcttgtggtgccctgagggcattgagggttgcttcagcgagataccggctggattttgatccacggttgaaggaggcgcctgagcggactatccgatttgcagctgagaaggcagttttagaagggaaacacgtcgatgataggcgtttacttcttcaatgtgttgcattgggcttgacgcagtgtgggcaggtcactcctcatgagtcagtgttgcgttgtgtctgtatggcgctactggaggagcttcttcctctgccagatttgctcaagatgtctgtgcaatgtccagatgggaattcacctgaaattgtcaagaatcgggtgaagcaacatctggatagtgtgcttttcaaggaggctggacctgttgctggaattctctgtaatcagtattcatttgccagtgataaggctaaaacttctgttgaaacgtgtgtatgggaatatgcacaagtgctgtattgtcatcttcgtgcagcagtaattttgcatcaggggaagcaggatgatttgatcacagatattgagaagatcgccgaggctgcattccttatggttgtagtcttttcagccgaggtcactaagcacaggttgaatgctaagtcctcagagggattccaaccagatgttgctgttaagatcttggtgtccttctcttgtttggaacatctgcgacgcttgcgccttcctgagtacactgaggcagtccggcgtgctgttcttgtcaatcaggaaaatgcggcagttgctgctttgttcattgagtcaattccttcttatgctgaattgacaagtaaaccaggttgattttttaattcccatttgtctcattttaccgttctgattctgatactgttcattaaggtcctttttttggcatattgtagatttattaaccttggatggaacaagatatatctggcacggagatgtggttcagacatcacgcatattgttttatctgcgggttataccaacttgcattagcctcattccagcccacatgattcaggacaagttagcttcgatcatgttcttgtatcctttcaaactgcagtttgttattttttgtcttgatatttaatttgttcttggctatctagattttcgatattaagaaaaagtgtccttatcataaaattgtcagatacatacagcattcaaatgagaaagtaacacgtgcctcacactcagtggtggtatctttcttgtcatccggcaatgatactgatccggatgatcgaatggctttgaaagaacaacttgctttttactatatcaagagaactttggaggtaactcattggctactattcccatatttgatttctatctggaagactaatttagttggctattttcttttaacttaataggcctatcctggggtaactccctttgaaggattagcatcaggagttgcagcactcgcccgacatcttcctgctgggagtccagccactcttttctgtatccataaccttgttgtcaaggctaaagatctttgccatacctcaatggtagaggacaaatccttgtggaggtcatgggaaggtagcacagaaccttgtaagaaaatattagacctgttgctgcggctcatcttcctcgtggatattcaggtaagatctctctcttgaccaatattttgttcatgtgtagagtagtatttattttctggaatattcatgtgttgttccatggttgtattcaggatggtacttagtttctaggacgataattttactgcagaatcatggaatcacaaacaaatttatttgtcacattacaaacttcactagctaggaaaatctgtatctttggtgattgaatgactcgcgaaccactgtgttccatactcggtagctatgtttcaaccggctttattgaggctatcattcaattccaatgtttttcatctcttgagtcttgagagtgcataagcctttgaagttgcagataccatgcactactaacaccctcttttgccctctctgcagtcattcccttatctgctgaaggagctggcggaattcgtcagtctgctaccgaaggaaggtcaggatgtgctccttgacgacatgcatgctcatgttgcagaatctgatgatgtcacacggaagccggtacttgtctcttggttgcagtccctctcctacataagctcacaagctacccgtcataaatctctcgataatgtaggaagcgatgaactaaacctgaacagaactatggcaaggttgtgatatcagcttgccttgtgtgctatgcttcttttttttttttcagaagtcatactagtattgtatgtacactgccactacaatggtatagagtagaatggaagattagagatgcaatcactcattcactatctgatttgataacatgagacacacaccaacatttctgacaatctcataaattcataattttac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0123400, RefSeq:Os02g0123400