Os02g0123700

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Revision as of 02:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0123700| Description = Similar to CEL5=CELLULASE 5 (Fragment)| Version = NM_001052272.1 GI:115443914 GeneID:4328141| Length = 3062 bp| Def...")
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Gene Name

Os02g0123700

Description

Similar to CEL5=CELLULASE 5 (Fragment)

Version

NM_001052272.1 GI:115443914 GeneID:4328141

Length

3062 bp

Definition

Oryza sativa Japonica Group Os02g0123700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1237099..1240160

Sequence Coding Region

1237167..1237820,1238053..1238142,1238689..1238841,1238934..1239045,1239460..1239623
,1239709..1240047

Expression

GEO Profiles:Os02g0123700

Genome Context

<gbrowseImage1> name=NC_008395:1237099..1240160 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1237099..1240160 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccagggcttgcttgctcctcgtcgtcgccgccgtctgcctcgccggccgcgaggcggcggcgttcaactacgccgacgccctcgacaaggccatcctcttcttcgaggcgcagcgctccggcaagctgccgccggggcagcgcgtcgcgtggcgcgccgactccggcctctccgacggctccgccgacggcgtggacctcgccggcggctactacgacgccggcgacaacgtcaagttcggcctgcccatggcgttcacggtgaccatgctgtcgtggagcgtcatcgagttcggcgacatgatgccggcgcgccgctcgtcgttcctcggcggcatcttcggcggcggcggcgtcgcgcagctcgacaacgccagggccgccgtgcggtggggcgccgactacctgctcaaggcggcgacggcgacgccggacaccctgtacgtccaggtcgccgacccgtaccaggaccaccggtgctgggagcggccggaggacatggacacgccgcggagcgtgtacaaggtgacgccccagagccccggctccgacgtcgccggcgagaccgccgccgcgctcgccgccgcctccatcgtcttccgcgtctccgacccctcctactccgccaagctgctcgacgcagctcaactggtgtttgatttcgcggacaaatacaggggatcatacagcgactcgctgagctcagtggtgtgtccgttctactgctcccactcctaccatgatgagctgctgtgggcggcgtcgtggctgcacctggcgtcgccggagaagaaggacgtgtacctgtcgtacatcgggtcgaacggccacgcactgggcgccgagcaggacgacttcaccttcagctgggacgacaagcgcgtcgccaccaaaggattcttgcagagcagagcggacgggctgcagctgtacaaagcgcacactgacaactacatctgctcccttgtccccggagccaacggcttccagtcccagtacacgccagggggtctcctgttcaaagaaggcgacagcaacatgcagtacgtgacatccaccgccttcctcctcctcacctacgccaagtacctctcctccagcgccgccaccgtctcctgcggctccaccgccgtctccccctccaccctcatctccctcgccaagaaacaggtggactacatactcggggcgaatccggcggggatgtcgtacatggtggggttcggggcgaggtacccgcggcacgtgcaccaccgcggcgcgtccatgccgtcggtgcgcgaccacccggcgaggatcggctgcgacgaggggttccgctacctgcactcgccggagccggacaggaacctgctcgccggcgccgtcgtcggcggccccgacgccggcgacgccttcgccgacggccgcgacaactacgcgcaggccgagccgtccacctacaccaacgcgccgctcgtcggcgcgctcgccttcttcgccggagcgcacaagatcttcacgccatga</cdnaseq>

Protein Sequence

<aaseq>MSRACLLLVVAAVCLAGREAAAFNYADALDKAILFFEAQRSGKL PPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDM MPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHR CWERPEDMDTPRSVYKVTPQSPGSDVAGETAAALAAASIVFRVSDPSYSAKLLDAAQL VFDFADKYRGSYSDSLSSVVCPFYCSHSYHDELLWAASWLHLASPEKKDVYLSYIGSN GHALGAEQDDFTFSWDDKRVATKGFLQSRADGLQLYKAHTDNYICSLVPGANGFQSQY TPGGLLFKEGDSNMQYVTSTAFLLLTYAKYLSSSAATVSCGSTAVSPSTLISLAKKQV DYILGANPAGMSYMVGFGARYPRHVHHRGASMPSVRDHPARIGCDEGFRYLHSPEPDR NLLAGAVVGGPDAGDAFADGRDNYAQAEPSTYTNAPLVGALAFFAGAHKIFTP</aaseq>

Gene Sequence

<dnaseqindica>69..722#955..1044#1591..1743#1836..1947#2362..2525#2611..2949#aaccatgcatgttaattaactcgtgcacatacatacgccacgtactagcatctgtctgatctgccaccatgtccagggcttgcttgctcctcgtcgtcgccgccgtctgcctcgccggccgcgaggcggcggcgttcaactacgccgacgccctcgacaaggccatcctcttcttcgaggcgcagcgctccggcaagctgccgccggggcagcgcgtcgcgtggcgcgccgactccggcctctccgacggctccgccgacggcgtggacctcgccggcggctactacgacgccggcgacaacgtcaagttcggcctgcccatggcgttcacggtgaccatgctgtcgtggagcgtcatcgagttcggcgacatgatgccggcgcgccgctcgtcgttcctcggcggcatcttcggcggcggcggcgtcgcgcagctcgacaacgccagggccgccgtgcggtggggcgccgactacctgctcaaggcggcgacggcgacgccggacaccctgtacgtccaggtcgccgacccgtaccaggaccaccggtgctgggagcggccggaggacatggacacgccgcggagcgtgtacaaggtgacgccccagagccccggctccgacgtcgccggcgagaccgccgccgcgctcgccgccgcctccatcgtcttccgcgtctccgacccctcctactccgccaagctgctcgacgcagctcaactggtaggcacagacagctagctgtcacatactcacattcatcttgatttgattttaaatttgagaaactccccagagtcttccgctatggtggattagacgatctgggtagtctcaccccttctaattatttgatattaagtactttcttaatatttatgtctttttatttgattttaaatttgatttgattcttgtgttgtgcattggcgcgcatgcattgatgcatatgcaggtgtttgatttcgcggacaaatacaggggatcatacagcgactcgctgagctcagtggtgtgtccgttctactgctcccactcctaccatgtaagctacgcaacctgcagcacgcagccaccgataatttgttcctagtcttggaccttttctcttgtccctttactcttttcaatacatcacaatatgcactgcaattttgtcttactcatgcacgggcgatataccatccctaccaactttttttcaagtcttgtctgaatcgatcggccagtagaatgcagagcacacaccagtggacacatactgctccctgcacatatacagatttctctgaattttctgaattctgtcatagatctgtttcaattgaccaagatgatcggttgagagtgtagcacggctctacccctcccgctgtttggagtagagttacccgtcgtacgagtttttctttttctcccttgttttttatctttgttttcttccttccttggtataggtcggtctggctgattgcgttgtgtaacaaaaactctattcttctaatatattagtgtgcaatctttttatgcgcttgcgaaaaaattgaccaagatgatctgattggttgatcgaggtgtgatgtggatgcaggatgagctgctgtgggcggcgtcgtggctgcacctggcgtcgccggagaagaaggacgtgtacctgtcgtacatcgggtcgaacggccacgcactgggcgccgagcaggacgacttcaccttcagctgggacgacaagcgcgtcgccaccaaagtgctcctctccaaggcactttcagaaatcagattcatcgtttcgcttatgctaatgaatttacagaattaacttgtgcaactctgtctcagggattcttgcagagcagagcggacgggctgcagctgtacaaagcgcacactgacaactacatctgctcccttgtccccggagccaacggcttccagtcccagtacacgccaggtacgtagtgcaacttaggtggtatttaaaactcatttagatgagtatcaacattaagattaaatgttttacgtaaaaatgagatggtgtctgattaattgagatgtaattattataaattttttaaaaaatatttatctaatattttatagcaactttcatataaaaagtttttatacgaaacgcaccgtttagcagtttaaaaaacgtgtcacgaatatccaaaatttcatccaacttttgttggagaaaacagaaaagagcataacctatttctttcgtcacaaaataagttaatatggtatgctagattaacttattttagacaaaaaaaaagtaattaatatggtgatttggtgtcgttttcagctgctgagtaaattactgaactgaatttcaatgcaattaatgcagggggtctcctgttcaaagaaggcgacagcaacatgcagtacgtgacatccaccgccttcctcctcctcacctacgccaagtacctctcctccagcgccgccaccgtctcctgcggctccaccgccgtctccccctccaccctcatctccctcgccaagaaacaggtagtactaacaaaattcactcgaattcgacaaaattcaaccaaacagctcactaaaactgaacaaataaactcatctgatccaggtggactacatactcggggcgaatccggcggggatgtcgtacatggtggggttcggggcgaggtacccgcggcacgtgcaccaccgcggcgcgtccatgccgtcggtgcgcgaccacccggcgaggatcggctgcgacgaggggttccgctacctgcactcgccggagccggacaggaacctgctcgccggcgccgtcgtcggcggccccgacgccggcgacgccttcgccgacggccgcgacaactacgcgcaggccgagccgtccacctacaccaacgcgccgctcgtcggcgcgctcgccttcttcgccggagcgcacaagatcttcacgccatgatcgatgaactcgatctagcttacgattaagcttaattatgtacgctacgagatgcatgtgagtgacgatggtgtcacttcgattaattgattaattaattggcgggtgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0123700, RefSeq:Os02g0123700