Os02g0126400

From RiceWiki
Revision as of 02:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0126400| Description = Similar to Protein kinase CPK1| Version = NM_001052286.1 GI:115443942 GeneID:4328155| Length = 6404 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0126400

Description

Similar to Protein kinase CPK1

Version

NM_001052286.1 GI:115443942 GeneID:4328155

Length

6404 bp

Definition

Oryza sativa Japonica Group Os02g0126400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1387873..1394276

Sequence Coding Region

1388049..1388330,1390352..1390482,1390840..1390881,1391027..1391138,1391241..1391319
,1391441..1391610,1392503..1392629,1392731..1392846,1392926..1393033
,1393118..1393180,1393283..1393456,1393814..1393978

Expression

GEO Profiles:Os02g0126400

Genome Context

<gbrowseImage1> name=NC_008395:1387873..1394276 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1387873..1394276 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcgtgcttctcatcccacactgcgaccgccgccgccgatggcgggagcgggaagcggcagcagcggaagggggatcacaaggggaagctccccgatggcggcggcggcgagaaggagaaggaggcggcgcgggtggagttcgggtacgagagggacttcgaggggaggtaccaggtcgggaggctgctcggccacggccagttcggctacaccttcgccgccaccgaccgggcctccggtgaccgcgtcgccgtcaagcgcatcgacaaggccaagatggttcgccctgttgctgtggaggatgtaaagagagaagtgaagattcttaaagaacttaaaggccatgagaatattgttcacttctacaatgcgtttgaagatgactcatatgtatatattgtgatggaactatgtgagggtggtgaactattggaccggattttggcaaaaaagaacagccgttatagtgagaaagatgctgcagtggtggtgcggcagatgctcaaagtggcagctgagtgccatctgcatgggctagttcaccgagatatgaagcccgagaacttccttttcaaatcaaccaaggaggactcacctttaaaggcaacagattttggtctgtcagacttcataaaaccagggaaaaagtttcacgatatagttggcagtgcctattatgtagcaccagaagttttaaaacgacggtctggccctgagtcagatgtttggagcataggagtcataacttatattttgctctgtgggagacgccctttttggaataagacagaggatggcatattcagagaggtactaagaaacaagcctgattttcgtaagaagccttggccaggcatcagttcaggtgctaaagatttcgttaaaaagttacttgtaaagaacccaagggcaagattaaccgctgctcaagctctctcgcatccatgggtaagagaaggaggagaagcatctgagatccctgttgatatatctgtattgtccaacatgcgtcagtttgtcaagtacagccgttttaagcaatttgctctgagggctttagcaagtacactaaaagaggaagaactagcagatctgaaggaccagttcgatgcaattgatgttgataaaagtggatcaattagtattgaggaaatgcggcatgcccttgcaaaggatcttccttggagattgaagggcccccgtgttctcgagattatccaagcaatcgacagcaacactgatggtcttgtggactttgaagagtttgtagcagcaaccctccatatacatcaaatggctgagcttgactctgaaaggtggggcctacgctgccaggctgctttcagcaaatttgatctggatggtgacggatacatcactccagatgaactcagaatggtgcagcacactggcttgaagggttccatcgagccattgctggaggaggccgacatcgacaaagacgggagaataagcttgtcggagttccgcaagctcctgcggacagcgagcatgagcaaccttcccagtccaagaggacctccaaatccacaacccctgtga</cdnaseq>

Protein Sequence

<aaseq>MGACFSSHTATAAADGGSGKRQQRKGDHKGKLPDGGGGEKEKEA ARVEFGYERDFEGRYQVGRLLGHGQFGYTFAATDRASGDRVAVKRIDKAKMVRPVAVE DVKREVKILKELKGHENIVHFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYSEK DAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKK FHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWNKTEDGIFREVLRN KPDFRKKPWPGISSGAKDFVKKLLVKNPRARLTAAQALSHPWVREGGEASEIPVDISV LSNMRQFVKYSRFKQFALRALASTLKEEELADLKDQFDAIDVDKSGSISIEEMRHALA KDLPWRLKGPRVLEIIQAIDSNTDGLVDFEEFVAATLHIHQMAELDSERWGLRCQAAF SKFDLDGDGYITPDELRMVQHTGLKGSIEPLLEEADIDKDGRISLSEFRKLLRTASMS NLPSPRGPPNPQPL</aaseq>

Gene Sequence

<dnaseqindica>177..458#2480..2610#2968..3009#3155..3266#3369..3447#3569..3738#4631..4757#4859..4974#5054..5161#5246..5308#5411..5584#5942..6106#accttcctctccaccttcctcttcctcccgaccaaacaacctccctcctcctcctccacctcgtcgtcgtctccgccgcgctgtctcctcctctatataccctcacccacactcgcacgcgcaaacccaacccccgcatatgcttaactccccaacccaaaccctcctcctcccccatgggcgcgtgcttctcatcccacactgcgaccgccgccgccgatggcgggagcgggaagcggcagcagcggaagggggatcacaaggggaagctccccgatggcggcggcggcgagaaggagaaggaggcggcgcgggtggagttcgggtacgagagggacttcgaggggaggtaccaggtcgggaggctgctcggccacggccagttcggctacaccttcgccgccaccgaccgggcctccggtgaccgcgtcgccgtcaagcgcatcgacaaggccaaggtactactaatactattactactggactttgacgcttggtctgtgtgattcgctgcggtttcgcgggaattcgggagttccatttcggattgagctagtgcgaattggttttgtttagattgttttctcgaattttgggcgtttagctcaagtaaaattctgattcatcaacgatatttttggttgttttgggtagtttagctgtcggtgaggccctacactacactcctcctaatcatatcatttatcgtttagttggggatttcacctcgttcaattaccccctgaaatggcaaaaggtggctctctttgaaacggttacgatgttttcaattttggctatttgcgcactactcgccaaatctggtgcattgtcatactaatttcagctgattgttgcttcttccttggcgcttgcttttttttagtaaacctgccaacttcgatccattttatgtacttaacatgtaaatagttcacatagagcactagtatttgtggctcttgttggtgtctccagattcatctgatttttttttcatggagatatttctcatcttgacagatacctcctctaggtgttcatagtgtaactagattttctcttgataagaccagtcaggaaagccaactggtaatggaaaacgtgtcattgtattcttctacggtatatttgtattggtggatggcattttcttcattccacacaacttgaccttgtaatacatataccaatcaacacggcgttgattttgtcaaaaatactttggacctttggttgaaatttaagcatttccttattaatgcttttattaaaatgtaaatttatggaagaaaaggccacttactaatcccagataatttttgtagtaaattagtatcatagttaaaactagaatcagatctaaatgctcaattttgcctgtggcaggttaagtgactgtgttaacctgtgtgatttttttttgggtgggaatatgcaaaaaggtttgtgcatctttgcattaagaaagagagtttgatacaatccgccatgctaggtagcaggccacaacattaaacagattccttgccacatcagctacgacctaggagagacagcagcatgctgctcaaactcagcctcggcatcctgacccctgcagttacccacagctgcacttccttgacgatagcttggatgagctgcgcccaatccctatgtgtatgattgaaaactcggttgttgcactctttccatatcacccaagccaccaggatgacaattgaatcgaagcctcctttttgggttttgttgagtcctcgatacgtgttaaaccaccatgaagcaaagtctgtttgccggactggtaggtgttgcggtatctgcaaagcagtcaggatcacccaccagacctgacaggacttggggcattgcaccagaatgtggtcaatggtctccacttcttgatcgcagaagaggcaattccacctgtgagaaaatcaaacatctttgttaaggagtgtaactggagcaccggctattatgtttcaaactataccaatgataatagaacaggctagttggactgtgtttaaattctagtttcacataataacctttgtagacaatttggtataactaattcactcgttttcttgattgtgcacagccttgggcacaggcagctctaggctgtatgatgtgcagcttgagttgatctactacttctgttgcacacatgatcacaattttataacatttgtgtccttaccaccggcttgcttcttgatgtttgtgggatgtggataaaataatcataatgcatgaatgagcttgcataattaagtgaagataatctgttatatttaaattagagtagcacatgcaatcacctgtctgtacagtagatattgcgatgttcatccatggttggagccttggatgcatgctctgtatagatgcttttatgtttgtctactctacattatctttaggatatgtgattgaaggcgatttgaattttgatattttatggcagatggttcgccctgttgctgtggaggatgtaaagagagaagtgaagattcttaaagaacttaaaggccatgagaatattgttcacttctacaatgcgtttgaagatgactcatatgtatatattgtgatggagtaagtagttatatactagcttctcttacatttcgtgcacaatgttatttgctatatacactccttgcacttacattttatttctacctaaatcctaatacgtctttactgccagttgcattctctatcatttgtttacagtatatgaatatatacacagttcttccaaaatcacatctcgaattcatgtcttcatggcaataaccatttatatggtcagaactcttagtatgctttaccatttccccttgctatgccccaatagtttccaagattatctaaagagagtatgcacgaccacatatgatttccatcagtcatacggtaccaacccttgcttcctttctatttttgcagactatgtgagggtggtgaactattggaccggattttggcaaagtaagattagatatatcctccatttcttcttctgtagttgatacattttcttctatctttttgtgtcatcattctttagtttccattcccgtacagcttctagggccataaggccattacttactggcaccttccattttgtcagaaagaacagccgttatagtgagaaagatgctgcagtggtggtgcggcagatgctcaaagtggcagctgagtgccatctgcatgggctagttcaccgagatatgaagcccgaggtagaaattgaacgctttcaatgtcttggcaattagtgtacattttggtgatatttcattacttctcaggtcatgtaagaatgtacctattttccttcccagaacttccttttcaaatcaaccaaggaggactcacctttaaaggcaacagattttggtctgtcagacttcataaaaccaggtatttatttcaagagcttttgcttatgtgcatctttgctatgtgcttccaattgttgcttctgatttgagtaggacatacaagtctgcagttcattcattgttttctttcattactgtagggaaaaagtttcacgatatagttggcagtgcctattatgtagcaccagaagttttaaaacgacggtctggccctgagtcagatgtttggagcataggagtcataacttatattttgctctgtgggagacgccctttttggaataagacagaggatggcatattcagagaggtaagtgatgaactgttcccaagcttttgcttcaagcaaaatgtgtttggtgagagtgccaaccttttactctgttgtcggtgtgcttatgtgatggaggaccagtgttatctacatttcttcaagttatgcggcattgttaccctgttaacgatgtgtcagtttttataagcatagcttgtattatttttcacacggtagggcacttggctacttggtcaggctgtccttgagtgatgtctgaactagctgtctaaaatacagcctcatcatattttgtgaatgctactccctccgtcccaaaatataagcatttttagctatgaatctggacaactgtgtgtccagattcatagccaaaagttgttatattttaggacggaggtagtaatgttatgactattagagtgagtagcaaaattgaacttcacttctagtttcaattagtatgaatgggcaacctgtggttccaacagccttagcaaccaatgttccagtgcttagttctagacagctggcaccatttgagtatagaatcctcttaggaccattattcccatcagactatgctagatttttttttttgaattacgtgtatttacagaaggagaacattttcagtcttatccgtcatcttgccgtatgtcttctgccagcatatgccacgtcagagaacatttccactttatttgttgaattagaaaataacgatacagagaaaataggcattcaactcaacctgtgaatgcagttacgtacttaggtagtatggtttccctcttcaatgaaccagcattttgttgtaatgctgattatctttgtgcatttaaatcaacatagacatcttgtggtgtacataatcttctgcatccccttgccttctaataatcaggtactaagaaacaagcctgattttcgtaagaagccttggccaggcatcagttcaggtgctaaagatttcgttaaaaagttacttgtaaagaacccaagggcaagattaaccgctgctcaagctctctgtaagttcctacatctaatctaagatagtcttaatacaatagtagtgaatcttcgtcagctgtcaatccttactgtcctgtttatgctttgatatgtttagcgcatccatgggtaagagaaggaggagaagcatctgagatccctgttgatatatctgtattgtccaacatgcgtcagtttgtcaagtacagccgttttaagcaatttgctctgagggtaaattttgtgtgcaactaatcttacatatcttttctcactatatgttcctaatgatgttggtttctttcatgctcaggctttagcaagtacactaaaagaggaagaactagcagatctgaaggaccagttcgatgcaattgatgttgataaaagtggatcaattagtattgaggaaatgcggcatgtaagttcttactggatattcttaatgaaaatgcactttggcacataattgaagtctctgattgtcttttttatgtttcaataggcccttgcaaaggatcttccttggagattgaagggcccccgtgttctcgagattatccaagcagtaagtgtcaggccttctttattattttcccccttattttcggagcaactagcttaccatctatcagagtcgtacttcaactgtgatattattctgtggcagatcgacagcaacactgatggtcttgtggactttgaagagtttgtagcagcaaccctccatatacatcaaatggctgagcttgactctgaaaggtggggcctacgctgccaggctgctttcagcaaatttgatctggatggtgacggatacatcactccagatgaactcagaatggtaagtttcaattcctgttctgtgttcatgttggtttatgtagctacctcatatttagtgaatgaagtgattttgtccacagaagatattatttcttacaccaagaaagaaaatcccagattttcacatatgttagtcgatgctccacatagtaggggcctgtctcatacgtataggaggcctgtttgataaattgaaaagcatttttctttgtgcaacatcgaagaccagtttgttgcagtgtgctatttcagcaattagatgcgagattaattttgactaattaatcctgtataaatgtttggactgtgacagaaacaaaactagtagtatttctcattgaggtttactttcaaggtgcagcacactggcttgaagggttccatcgagccattgctggaggaggccgacatcgacaaagacgggagaataagcttgtcggagttccgcaagctcctgcggacagcgagcatgagcaaccttcccagtccaagaggacctccaaatccacaacccctgtgaacgtcggtaagaaccgagatgagacgtcgtaaattagtcttgtaaaggttgtcttgttcctgtccgcgtgccatgtgatgttgagggtgtcttgagtttttagcatccaggttccgtgtgcagcatgcagataaagtttcggtgtagtacggagtacatacatatttttttcaaaaaaaaatgttacaagcagaaatgctgttctagtctcccattctcctccttgtacataattctatatatgtatgatttgattgcacgtattcatcgcaataaagttgcctgggattgcatgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0126400, RefSeq:Os02g0126400