Os02g0127000

From RiceWiki
Revision as of 02:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0127000| Description = Protein prenyltransferase domain containing protein| Version = NM_001052292.1 GI:115443954 GeneID:4328161| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0127000

Description

Protein prenyltransferase domain containing protein

Version

NM_001052292.1 GI:115443954 GeneID:4328161

Length

3694 bp

Definition

Oryza sativa Japonica Group Os02g0127000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1412219..1415912

Sequence Coding Region

1412824..1412853,1413015..1413063,1413775..1413869,1414024..1414109,1414185..1414244
,1414322..1414403,1415228..1415341,1415444..1415608

Expression

GEO Profiles:Os02g0127000

Genome Context

<gbrowseImage1> name=NC_008395:1412219..1415912 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1412219..1415912 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgccagcgtctcgatgtggcaaaggattgtattggagtgctttccaagcagtttcctggcagcatgcgggttggtcgattggaagccctgctgtttgaagcaaagggtgaatggactgatgctgaaagggcctatgcgcttatccttgaaaacaatccgttcgatcagattgtccacaagagaaaaattgctattgcaaaagcacagggtgacatggcattagctgttgagtatctcaacaagtatttggaactatttatggcagatcatgatgcttggagagaacttgctgaaacatatgttgccttacaaatgtataaacaagctgccttttgttatgaggagctaatattggcccaaccaaccgttccactttatcatctagcttatgccgaggttctgtatacaatgggtggtttggaaaaccttcaaacagctagaaaatattatgcatctacaatacagttgactggaggcaagaatacaagagccctctttggcgtgtgtttgtgtagctcggcaatcaatcagttgaccaaagggaggaataaggaagaggaaagctcagaactgcagagcttggcttcagaggcactattgaaggattacaagcaacgagcaccgtcgaaggaggcactcatcaccagcctgttgaagaacatgaaactctcctga</cdnaseq>

Protein Sequence

<aaseq>MDCQRLDVAKDCIGVLSKQFPGSMRVGRLEALLFEAKGEWTDAE RAYALILENNPFDQIVHKRKIAIAKAQGDMALAVEYLNKYLELFMADHDAWRELAETY VALQMYKQAAFCYEELILAQPTVPLYHLAYAEVLYTMGGLENLQTARKYYASTIQLTG GKNTRALFGVCLCSSAINQLTKGRNKEEESSELQSLASEALLKDYKQRAPSKEALITS LLKNMKLS</aaseq>

Gene Sequence

<dnaseqindica>606..635#797..845#1557..1651#1806..1891#1967..2026#2104..2185#3010..3123#3226..3390#atctgcggcggcggcgacggccgcggaggacggggcgcggctgctgcggctggaggagcaggcggggcacggcggcggcggcgcgtgggagtacctctgcctcgcccgcaggctccgcgcgcgccgcccggagcccgtcctccgcctcggcctcgccctcctcaacgactcctccgcccgctcccgcctcgcctcagaacgtaacctgccatgtcctccctcccccctcccctcccctctacccgatctctcgcaattccgctcggtgggtagatggatttggtggatagatctcgtgatctgctcctcccgacgccccgatccatctgtggatgcgatgccggggttttggatggccaactttgaaccctattgttagattgcggttgtagtactgtgggatctgtagaattgaggtttttttttagaaaaataataattgtgtgttgcctgaaacccctgctgttttacagttagaattactgcaataggattgcaaggctgcaggatctgattgctcccttcgcgattagttcactagtgaactgagattgctttattttgatgcagagtggacgctgtatgagcaggtggcagtggctgccatggattgccagcgtctcgatgtggcaaaggtgaggttgcgctcgtgttgtactggcagtggcacccttttgagctcagttcctgtttctctgattcaacgcaatttcatttaatcactaaacagttcacgcttttggggcctttagttatccaaatttctgatgaagcgatctctttcatgactttacaggattgtattggagtgctttccaagcagtttcctggcagcatgcgggttggtaagttctttcagagatcagcataatatagttagactagcatcatttgtcaacaaacgtagatcttatattttgcttttggatgcacatccgataagactggaaataaaaattacatatggctgagaaaaactaaatataaaaacaatctggcctagaacttaaaaaaatgccaccaatcctgtgtcataaatttatgtcaagttacaattagggttgacaataggccactctgtcaataacttgaggagaaaatacggaggcaaatggtcagggctattaatctagattattatgagttgcactgaattgcttaaccatagtacaatatgatgctaaaccaatcttacaggaactgatgttgatttctttgaaaagatacacctgtatctagcttactactccatatatcaagatagaacgatgatgtggtaagctggattatagcaatgctatcagactaggcattatttgatctaaagtaggagggcagtgtgcctatcaactgaacatgtcatatcttacatgtttcttaactaatgatctattacctaaatcctggtgcgcacaaataaatgccacatacacctaatatcaaattcccctatacttcatatgagtttgcaacttgatatatgctgagacatgtgatgctgattcttatggatatttttctgcatatggtactaaacactttgccctcaaatgaaggtcgattggaagccctgctgtttgaagcaaagggtgaatggactgatgctgaaagggcctatgcgcttatccttgaaaacaatccgttcgatcaggtataattgatatttctgctgctgatcctggtttatatgctgtgaacctgatgtgcaagatggagtttgatttccttggtatataaagccgttcaaatgcttgggatgataattttacaggggcatattaaatattttccttgtgtgctttcagattgtccacaagagaaaaattgctattgcaaaagcacagggtgacatggcattagctgttgagtatctcaacaagtatttggaactgtaagtatctgcatcaacctgatgcgttaaccatatatgtttacctctaatacagtgactttccctgtgtgttagatttatggcagatcatgatgcttggagagaacttgctgaaacatatgttgccttacaaatgtgagatatttaatcatcgattcattcacatctgttagaatgtgatgatgctaattttgttattcctcttgtatcaggtataaacaagctgccttttgttatgaggagctaatattggcccaaccaaccgttccactttatcatctagcttatgccgaggtaagtgaactatgccaaactcatccctcattctctcaaagtctcaaagaaaaataaaacaaaataaaattgtatcaacttatgcagtttctcattttcatgtggagtgcagcagtaatagtttgttttgttcctcaatgaactaatggccaactggccaagtcttacagtggcaatgaacatcaaaaggctaattaaaattaagcacagtaaagttattgctcatcctattgaaaacagtgttgcttgattcaatagaattccatacagagcgatatacttatttgcacattttacggacgttgtgtttggcaatgtaaatggtgtttttgagaaatgaattcaaagtttatcttagaatttgcccccccccctctgtgctgtttttataccagttctgttgttatgttgtaaagtgatgatgggaagaatttgttggagcttgatcttatggggtcttctgggattttggtggggaaaattttctcccttgttttagtagttgttgtgtatgccatatgcacgttacttaatctatacagtaggtgcaagagaatttaccgcatttaccgctgcttttttctgatttatacataataacttatttaacatgcttttctgatttggagatgctactactgttgctttttttttttgttgaatgcaaaatcaccacaaatttagtgttctatacatgcaactaattcaagcctagaacctgtctgcaactcatgattctgctggaaactcaattgatctcatcctacacctctctgtacttctcaaattctcatgaactgtgtgtaatcctttatattttctaggttctgtatacaatgggtggtttggaaaaccttcaaacagctagaaaatattatgcatctacaatacagttgactggaggcaagaatacaagagccctctttggcgtgtgtttggtaagacatcagtgctgttccacaacttctaagaatctcagttggcttccttttgttatccaatactaatcctcttatgtataccaccttcaacatcaacagtgtagctcggcaatcaatcagttgaccaaagggaggaataaggaagaggaaagctcagaactgcagagcttggcttcagaggcactattgaaggattacaagcaacgagcaccgtcgaaggaggcactcatcaccagcctgttgaagaacatgaaactctcctgatcttgccctccactcatcgaaggttttttagcttgtggcacaatcgcagctagtcagtggcgccacaatggcagtttgacaaatcaattgatagcagtataatgcttgttttttttttctcctgatggcaccgaaattgtaaaacttatgtaagatgcttcaatgggttgtaccacacctgttttgatcatttagaaatatatattcatcgtcgtgttttgattgcaaactgtactaagaccatccgttgtaatttcaggatagaaaattttgaataataccttcgaaagctgtaccatttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0127000, RefSeq:Os02g0127000